Os01g0951200

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0951200| Description = Similar to Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-m...")
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Gene Name

Os01g0951200

Description

Similar to Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase)

Version

NM_001051947.1 GI:115442264 GeneID:4325739

Length

3782 bp

Definition

Oryza sativa Japonica Group Os01g0951200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43681914..43685695

Sequence Coding Region

43682013..43682807,43683480..43683563,43683665..43683747,43683829..43683916,43684033..43684287
,43685018..43685146

Expression

GEO Profiles:Os01g0951200

Genome Context

<gbrowseImage1> name=NC_008394:43681914..43685695 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43681914..43685695 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgccgcgcaggaatccctcatcctggagctccacgccatcgaggccatcaagttcggcaccttcgtgctcaagtccggcatcacctccccgatctacctcgacctccgcgcgctcgtctcccacccgggcctcctctcctccatcgccaccctcctccacaccctcccggcgacccgcccctacgacctcctctgcggcgtcccctacaccgcgctccccatcgcctccgtcctctccgtccaccgctccgtccccatggtcatgcgccgcaaggaggccaaggcccacggcaccgccaagtccatcgagggcgccttccgcgccggggaggccgtgctcatcatcgaggacctcgtcaccagcggcgcctccgttctcgagaccgccgcgccgctccgcgaccaggggctcgtcgtcgccgacgccgtcgtcgtcgtcgaccgcgagcagggcgggagggagaaccttgccgccaatgggatcacgctgcactcgctcatgaccctcacggaggtgctcgccgtgctgctcaagcacgggaaggtgaccgaggagaaggcgagggaggtaaggcagtttcttgacgccaataggaaggtgaccgttcccggagcggcgggcgccgttaagcccaaagcggtcaggaaggggtttgctgagagggctggattggccaagaacccgatggggaagaggcttttcgaggtgatggaggcaaagcagagcaatttatgtgttgctgccgatgtgggaactgcaaaggagctccttgagcttgcagagaaggttggtccagagatttgcatgctgaaaactcatgtggatatcttgtctgactttactccagattttggagctaagctttgctcgattgccgagaagcacaactttttgatatttgaagaccgcaagtttgctgacattggaaacacagtgactatgcaatatgaaggaggaatatttcgcatattagactgggctgatatcgtcaatgcccatataattcctggacctggaattgtggatggtctgaagcttaagggtttgccaaaaggaagagggctgcttttgcttgctgaaatgagctcggctggcaaccttgctcatggagagtacactgctgcagctgtaaagattgctgagcaacattctgattttgtaattggatttatatccgttaatccagcatcttggtcagttgcgccatcaagtccagcatttatccatgccactcctggagtgcagatggtttctggaggagatgctcttggtcaacagtacaatacccctcattctgttataaacgacagaggcagtgacataattatagtcggacgagggattataaaggcgagtaatccagccgagaccgcgagggagtaccgcatccaagggtggggagcataccaatccagcttgccatga</cdnaseq>

Protein Sequence

<aaseq>MDAAAQESLILELHAIEAIKFGTFVLKSGITSPIYLDLRALVSH PGLLSSIATLLHTLPATRPYDLLCGVPYTALPIASVLSVHRSVPMVMRRKEAKAHGTA KSIEGAFRAGEAVLIIEDLVTSGASVLETAAPLRDQGLVVADAVVVVDREQGGRENLA ANGITLHSLMTLTEVLAVLLKHGKVTEEKAREVRQFLDANRKVTVPGAAGAVKPKAVR KGFAERAGLAKNPMGKRLFEVMEAKQSNLCVAADVGTAKELLELAEKVGPEICMLKTH VDILSDFTPDFGAKLCSIAEKHNFLIFEDRKFADIGNTVTMQYEGGIFRILDWADIVN AHIIPGPGIVDGLKLKGLPKGRGLLLLAEMSSAGNLAHGEYTAAAVKIAEQHSDFVIG FISVNPASWSVAPSSPAFIHATPGVQMVSGGDALGQQYNTPHSVINDRGSDIIIVGRG IIKASNPAETAREYRIQGWGAYQSSLP</aaseq>

Gene Sequence

<dnaseqindica>100..894#1567..1650#1752..1834#1916..2003#2120..2374#3105..3233#acagtagtaataaaacctcctcctgtcggcttcctccttcctcctcccgccgccgcacagcgcaaaccccgcccaaaaccctagctaagcctagccgccatggacgccgccgcgcaggaatccctcatcctggagctccacgccatcgaggccatcaagttcggcaccttcgtgctcaagtccggcatcacctccccgatctacctcgacctccgcgcgctcgtctcccacccgggcctcctctcctccatcgccaccctcctccacaccctcccggcgacccgcccctacgacctcctctgcggcgtcccctacaccgcgctccccatcgcctccgtcctctccgtccaccgctccgtccccatggtcatgcgccgcaaggaggccaaggcccacggcaccgccaagtccatcgagggcgccttccgcgccggggaggccgtgctcatcatcgaggacctcgtcaccagcggcgcctccgttctcgagaccgccgcgccgctccgcgaccaggggctcgtcgtcgccgacgccgtcgtcgtcgtcgaccgcgagcagggcgggagggagaaccttgccgccaatgggatcacgctgcactcgctcatgaccctcacggaggtgctcgccgtgctgctcaagcacgggaaggtgaccgaggagaaggcgagggaggtaaggcagtttcttgacgccaataggaaggtgaccgttcccggagcggcgggcgccgttaagcccaaagcggtcaggaaggggtttgctgagagggctggattggccaagaacccgatggggaagaggcttttcgaggtgatggaggcaaagcagagcaatttatgtgttgctgccgatgtgggaactgcaaaggagctccttgagcttgcagagaaggtagtacatgtcactactatttgtggagttagttggtagattggttggttaaataaatttataagcatttcaaccctgacaagtcaaattctcctgttggatggataatcctgcaatttgtgtgtactttttagttcttagataatggacaatttgtgcatactttatgttgatatgtcaggctcagtccctgagttatctagtaagaaacaaattgggggttcggtagatatacctgtttatatagcacctgcttttgcttcatgaactgtctacttagactaggtctgttatactggagtccttgggaagtagaaacattgatttgatagttgagacatgctcagtgtgtgtttttctctgtttaaaatgtattttaaacatttctgtgcttagatatgctgtgtgctgcttcatctagtgttgcaaaaagaatgctccacagttgcagtttcttccttaagcagtcaagctagcattatttgtactttctgatttgttttttcctccagtctcatttcatccatttgcatgacctttagatatgctaagagcagattcactacttttagctttgttttttttctccttttggtgtgttttaacattacgctgtaattgctaaacccaggtaataatgcttgttaacttggttctccaatttttatgtaggttggtccagagatttgcatgctgaaaactcatgtggatatcttgtctgactttactccagattttggagctaagctttgctcggtatgttatttacttatagtttggcatgctaaagttattgtcctggtcagttttcacatggtctgttctttactaattgacccataaaacgttatttttagattgccgagaagcacaactttttgatatttgaagaccgcaagtttgctgacattggaaacacagtgactatgcaatatgaagggtgagaaacagcaccacaacctatcccttctcatctcctttatgtatttgtgtgacataagtgcctttaaccttgtttcagaggaatatttcgcatattagactgggctgatatcgtcaatgcccatataattcctggacctggaattgtggatggtctgaagcttaaggtatgctgtgctttacatgacttataccagagtttaaagttttgttagtattgttgcatcttcaggtagctgatttaacataatgctcacagtaacttttgtgttttgtactgaagggtttgccaaaaggaagagggctgcttttgcttgctgaaatgagctcggctggcaaccttgctcatggagagtacactgctgcagctgtaaagattgctgagcaacattctgattttgtaattggatttatatccgttaatccagcatcttggtcagttgcgccatcaagtccagcatttatccatgccactcctggagtgcagatggtttctggaggagatgctcttggtcaacagtacaatacccctcattctgtgagtttaaccttaccatcgaattcctttgtgtgattgattcacttttttctccttatgtcttaatgcatttttggaggtcttccaaagagtcaaacttagtaagaactagttaccaaagaatgaccgtcggttgttgtctcccagttattggtacagtaacatgaaacatcaaggttgctgtggaatacagacagccatcaaggcagattgttagtctcccagttattaatacagtagcacgaaacatcaaggttgttgatgcctgtgtagtctgtggaatacagagaggcgttgagactgattgttatgtgatgaagtcctagttggatatgctttccatatccattttgtctcgtgggccaaataatagtttgtttctaacttatactaccttagctcaagtttatctgggtattacgttcactttggattatcaggcgctaaacatttgagctcatgctatctttttcttctttacacaatttggaggcctttcatacggtagatgatttaacaaaacctatatcttgaagttctcagatcatacctgcaccatctttaacatgtctcatggcctaatcatgcctgcatcatcttcctatgtttttattattcgtcagtaaataatctggatgcttaggcaggaactcagttcttcgttccgtcctgttgcaatatgcttatgaactgatatattccttgcgacgccgttgtttactacgtacaggttataaacgacagaggcagtgacataattatagtcggacgagggattataaaggcgagtaatccagccgagaccgcgagggagtaccgcatccaagggtggggagcataccaatccagcttgccatgagaaattgagaatgtgtttaggccatgtttgtttcagcttatgattattataatctagattattaagccagattgctataagctggattataataagctgacatagaataagctgtgagttgtttgtttgtctggattattggaggcatggattattgggtttgaaaggctaaagtctataataccctcagctatctgttcggttgatggcatagtggttaatttttctcaagcatgtaggggtagtgggtctttagccactcaataatctgaaaaaagctcctttagagcagcttattagattataataatctggcttatagattataataatctgctacaataatctacttgtttgtttcagtttactcctaataaggtagattataataatcctaaactgaatcaaacaggcccttagtccacaccctatgccaaataatgggcattcactcattcaggcagctactgtaataagagcatgctctgcgttccatcagtattggctcgcgctgtttgcaacaataatttagagttcaagatgatgaag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0951200, RefSeq:Os01g0951200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0951200&oldid=28250"