Os01g0952000

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0952000| Description = Germin family protein| Version = NM_001051951.1 GI:115442272 GeneID:4325743| Length = 1238 bp| Definition = Oryza s...")
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Gene Name

Os01g0952000

Description

Germin family protein

Version

NM_001051951.1 GI:115442272 GeneID:4325743

Length

1238 bp

Definition

Oryza sativa Japonica Group Os01g0952000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43709531..43710768

Sequence Coding Region

43709671..43709794,43709915..43710462

Expression

GEO Profiles:Os01g0952000

Genome Context

<gbrowseImage1> name=NC_008394:43709531..43710768 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43709531..43710768 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagctgatcctcgccaccttcgccgtcgtgttcatggcgctcgccgccacctccctcgccggcgacccggacatgctccaggacgtctgcgtcgccgactacaagtccctcaaaggcccgctgcggctgaacgggttcccgtgcaagaggatagagaacgtgacggcgaacgacttcttcttcgatgggctgatgaaggccgggaacacggggaacgcggtggggtcggtggtgacggcggcgagcgtggagagcctgccggggctgaacacgatgggggtgtccatggcgcgtatcgactacgcgccatgggggctgaacccaccgcacacgcatccccgtgccaccgagatcatcttcgtcgtcgagggctccctcgacgtcggcttcgtcaccaccgccaacaagctcttcacccgcaccgtctgcaagggggaggtgttcgtcttcccgcgggggctcgtccacttccagaagaacaacggcaacacgccggcgttcgccatcgccgccttgaacagccagctccccgggacgcagtccatcgccgccgcgctcttcggcgccgcgccgccgctgccgtcggacacgctggccagggcgttccaggtcgacggcggcatggtcgagttcatcaagtccaagttcgtcccgcccaaatactag</cdnaseq>

Protein Sequence

<aaseq>MAKLILATFAVVFMALAATSLAGDPDMLQDVCVADYKSLKGPLR LNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARID YAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTANKLFTRTVCKGEVFVFPRGLVHFQ KNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIKSKF VPPKY</aaseq>

Gene Sequence

<dnaseqindica>141..264#385..932#atcgtcctcagctcatcatctgcatgcagttcactgcacaccacacagcttagcttgctcagcttcactgatcttcttagctgcagctacttcactttgcatagtttgatcgaactaaataactcaccaagttagctgtaatggccaagctgatcctcgccaccttcgccgtcgtgttcatggcgctcgccgccacctccctcgccggcgacccggacatgctccaggacgtctgcgtcgccgactacaagtccctcaaaggccgtaagtgttggaccattattgttcatcgattcataaaatatgaattgacctatttttttttaacgacccgtacaagacagtgcgaagattcatattaacgtatatatgtatgtcgtgcagcgctgcggctgaacgggttcccgtgcaagaggatagagaacgtgacggcgaacgacttcttcttcgatgggctgatgaaggccgggaacacggggaacgcggtggggtcggtggtgacggcggcgagcgtggagagcctgccggggctgaacacgatgggggtgtccatggcgcgtatcgactacgcgccatgggggctgaacccaccgcacacgcatccccgtgccaccgagatcatcttcgtcgtcgagggctccctcgacgtcggcttcgtcaccaccgccaacaagctcttcacccgcaccgtctgcaagggggaggtgttcgtcttcccgcgggggctcgtccacttccagaagaacaacggcaacacgccggcgttcgccatcgccgccttgaacagccagctccccgggacgcagtccatcgccgccgcgctcttcggcgccgcgccgccgctgccgtcggacacgctggccagggcgttccaggtcgacggcggcatggtcgagttcatcaagtccaagttcgtcccgcccaaatactagaattgcattgcatgcatgcatactgcaggaagaacaagatggcagctgagctagctagccctatcgcgataataataattaagaggacgtacgtacgtaccgttaaaaagtttgtgatttgattggtaggatttgtgtcagtgtgtgtttgtgtttgtgagtcgtttgatttgtaatttttatttttgtttttgagtcgtcgtcgatcgatcgggtcgtgtctcgtactacgtgtgtgtggtacgtggccggacctgatcattactgtattattacttcatggtttagtactaccactgttacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0952000, RefSeq:Os01g0952000