Os01g0953000

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0953000| Description = Conserved hypothetical protein| Version = NM_001051960.1 GI:115442290 GeneID:4325752| Length = 2688 bp| Definition ...")
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Gene Name

Os01g0953000

Description

Conserved hypothetical protein

Version

NM_001051960.1 GI:115442290 GeneID:4325752

Length

2688 bp

Definition

Oryza sativa Japonica Group Os01g0953000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43776537..43779224

Sequence Coding Region

43777029..43777985

Expression

GEO Profiles:Os01g0953000

Genome Context

<gbrowseImage1> name=NC_008394:43776537..43779224 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43776537..43779224 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgacggaggatttggagtggagcgactcgtacatgagcaggagctcgatctcgaccaccttatacgcctgatctcgctggaggcggcggaagaaggcgaggctgtcggttcggtcctggaagctaaggatgaggtcgacgaagaggcggcggaaggtgtggaagaaccggtgcgccttgacgacgagctcgccgtactccatgtgctcctcctggacatggatgttgtcgtcgggggggcgctccgggacgatgacgatctcggcgtgcaggccggcctccttgctggagtggtactcctccatgaacttggcgtagttcgggccagggtcggggcgcgtcagcatggagctccggaggctgctcatgctcgccgacttgagcgcccatgtccgctcgccgtacttgacgacgccggagacgaacatgaggatggccgggacgaggaggcccgcggcggaggggcgcgacttccagtagacgtagagggcgagggcgatctgggagacgaggctgaggaggtggcggagccagagctcgttgtcctcgatggcgaatgcggtgatggtgtcctgcccgccgaggtggaggatgaggaagggcgcccagaagacgaggaggtgcatgtcgccgccgccgtgggggccgttgctgcagagcttctggttctgggagaggttgccgagggcgtagatggcgatggagtcggcgaggaggtaggcgagccagagcatgaaatggagccaggcggcgacgttgcgcttgcggaggccgccggtgaagaggaggaagacctgcagcgagaggctgctcagcagaagcacccggatctcccactccccccacagccgccgcaggcccgccatctggccgcctcttctctcgtcgtcggcggcggcagctgctgctctgctctgcccggagtcggaggcggaggcggaggcggagcttga</cdnaseq>

Protein Sequence

<aaseq>MDDGGFGVERLVHEQELDLDHLIRLISLEAAEEGEAVGSVLEAK DEVDEEAAEGVEEPVRLDDELAVLHVLLLDMDVVVGGALRDDDDLGVQAGLLAGVVLL HELGVVRARVGARQHGAPEAAHARRLERPCPLAVLDDAGDEHEDGRDEEARGGGARLP VDVEGEGDLGDEAEEVAEPELVVLDGECGDGVLPAEVEDEEGRPEDEEVHVAAAVGAV AAELLVLGEVAEGVDGDGVGEEVGEPEHEMEPGGDVALAEAAGEEEEDLQREAAQQKH PDLPLPPQPPQARHLAASSLVVGGGSCCSALPGVGGGGGGGA</aaseq>

Gene Sequence

<dnaseqindica>1240..2196#gtggccggcctcgactctgtactggtcacccatgccgaagtgcgccatgagcagccacacgacggtgagcagctcgccgccctggctgagctgcttggcgtggaagttgcccctgcacttgccggcggcgtagcacagcatctccacccacacgccggccaccagccgccaccgcttccgccgctccagccgccgcagctgctccgccagcctgcacgcgtcgaacagcaccgacttgctccggtcccccttcacctcccgcgggttgatctccgtcttcaccttcgtcagcgcctccgccgccttcctcgctgccccgagctcgtccccccggaggaagaagttcttggtctccgcgcacgtgtccccgaaccggatctgcccgatgctcgccgtcagcatgaacggccgcatcaccagcaggaacagcatgtagttggagatctccctgctcgccgccggcaggtgcgacacgtcgttcaggtggctgtcgtccgccgtgggggcgtggtcggagcaggagcagaagcagcaagatgaccaccgcttcagcttcctctcgccggcgtcgcggccgtcgtcgtcgtcgtcgtcgtagaagcagaggtcggtggcgatgtgccagaggatgatgctctcgtcgaactccacctcgacgctggccccgagctcctggtagcaccccatccggtggaggaaccactggccgcggtggtcgccgaaccgccggtagctcatcgggtccgccgtgctgttggccttctccttgagctgcttgaagacgagctgcttgagcaccatggagacgccgatgtggtgggtgtaccagatactgtcccagatcgtcttcacgcggacattgtagtcccactcgagcttctcgagcgctccggtgagccatgtcggcttgtccttgaggcagtagtggatgaggttgtactgcgccatctggttcgaccaccgcggcctcgcctccggcaagaagtagctcaccgcccggaacaccccgctcgccacggggaggcacttgtccttcttccgcaggtcggcgaagctccatggcgagatggccatgaggaggatggcgtagatctccaagaagatggcgccgccgaggagcacgtaggagacggtgacgtcaaccggcttgtagggagccttgtcggtgccggagaagacgatgagggagaggacgggcgcggcgagggtgaagatgcggaggtagcggccggtcgggccatggatgacggaggatttggagtggagcgactcgtacatgagcaggagctcgatctcgaccaccttatacgcctgatctcgctggaggcggcggaagaaggcgaggctgtcggttcggtcctggaagctaaggatgaggtcgacgaagaggcggcggaaggtgtggaagaaccggtgcgccttgacgacgagctcgccgtactccatgtgctcctcctggacatggatgttgtcgtcgggggggcgctccgggacgatgacgatctcggcgtgcaggccggcctccttgctggagtggtactcctccatgaacttggcgtagttcgggccagggtcggggcgcgtcagcatggagctccggaggctgctcatgctcgccgacttgagcgcccatgtccgctcgccgtacttgacgacgccggagacgaacatgaggatggccgggacgaggaggcccgcggcggaggggcgcgacttccagtagacgtagagggcgagggcgatctgggagacgaggctgaggaggtggcggagccagagctcgttgtcctcgatggcgaatgcggtgatggtgtcctgcccgccgaggtggaggatgaggaagggcgcccagaagacgaggaggtgcatgtcgccgccgccgtgggggccgttgctgcagagcttctggttctgggagaggttgccgagggcgtagatggcgatggagtcggcgaggaggtaggcgagccagagcatgaaatggagccaggcggcgacgttgcgcttgcggaggccgccggtgaagaggaggaagacctgcagcgagaggctgctcagcagaagcacccggatctcccactccccccacagccgccgcaggcccgccatctggccgcctcttctctcgtcgtcggcggcggcagctgctgctctgctctgcccggagtcggaggcggaggcggaggcggagcttgactccagtggaggcaggtcgccgttgactcgttgacaagtcgtcggctcgtcgtcgccactcgccatggatgcggtgatcagatgggcccgatcagacgcgagcgccagtttgtacggcccactatgaaatgggccaacacatggatgtgatttcccactctcacctccccatctgctgcccgacccatgcagtggcaacgcaccgcagcggaacggatattgcggttggaaaaaagtacaatttggctcccttcaatataggtttgggctgtgtaaagttccaccggcaaaaaaaaaaaaacattgctacgtcatatcagatatatggacacacatttgaagtattaaacgtagattaataacaaaacaaattacataatccgtatgtaaactgcgagatgaatttattaagcctaattaatcagtcattagcaaatgtttactgtagcaccacattgtcagatcatgacataattaagcttaaaagattcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0953000, RefSeq:Os01g0953000