Os01g0956500

From RiceWiki
Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0956500| Description = Conserved hypothetical protein| Version = NM_001051975.1 GI:115442320 GeneID:4325412| Length = 4385 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0956500

Description

Conserved hypothetical protein

Version

NM_001051975.1 GI:115442320 GeneID:4325412

Length

4385 bp

Definition

Oryza sativa Japonica Group Os01g0956500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43933498..43937882

Sequence Coding Region

43933571..43933918,43934018..43934203,43935732..43935833,43935913..43935969,43936051..43936146
,43936224..43936316,43936433..43936552,43936643..43936675,43936754..43936804
,43937440..43937518,43937617..43937642

Expression

GEO Profiles:Os01g0956500

Genome Context

<gbrowseImage1> name=NC_008394:43933498..43937882 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43933498..43937882 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgaatccacagaaaatctatcatgccacagtggtagcccatcctcttctcatgatggaacaagcacatcaacaatagagggggagccaaaaccatcttctggggaccttgccaagatttcacgagaacacaaacaagaacaagaatcaatggaggatttagaagatctccttggcatggatgaggataccatctcaaacaaagtcagttactactttcatcagttatatgttcaggaccatcttgatgatgatgatgatgatgattggcttgaatgcgatgggccacagcagctcactgagttgcatgagcagctggccttctaccgcatcataggttatgagttatcaaatggtagaaagcttgacgaactggatattgcaaaactgaaagagaagtaccctccctccattctttatgagaaggggtactttcagtactatgaggatagtcttgaatggtactttgatcctgaacgattccagcctgctgcccttgataactaccagcgtctagtgctttgtgataatggtttgtacatggactgggatcaataccactcaaattatagtacctatgagagtgatctagcatatgtcaaattctgtgaagagctagcacataagactaagtggtttcaagattatttggtactcattgctgttgaggataagataaccatgggtcagtgggacaaagttaaaaatacagtttaccttcaagcaatgaagatcgcactacgcattcgtgttgtttctctaatgcaagttatgactgctttccaggaatatatatggagcatgcggtttgattgttgtaactacaaggattttgatggtgtgtattttgaggtttggaagcgggttgctaagcagaagatggaattcactgatgccctgtcagaactttatagagaagatatgtttcccttgcgcaatgttgatattaaggatgagcttcgcagtactcgagggagattccgttcgatgaaggaaaattacgatctctacgtggcttgcattgatgaaacggtgccagaaaaggaagctcgtcaattgatcaaagatgccattatagaaatgattccaaaaccacagacttatttggattacgccagaaacaagataaaaatcgcagaagatatcggtttgattaccaaaagcagaggaccagagccaagaacctag</cdnaseq>

Protein Sequence

<aaseq>MDESTENLSCHSGSPSSSHDGTSTSTIEGEPKPSSGDLAKISRE HKQEQESMEDLEDLLGMDEDTISNKVSYYFHQLYVQDHLDDDDDDDWLECDGPQQLTE LHEQLAFYRIIGYELSNGRKLDELDIAKLKEKYPPSILYEKGYFQYYEDSLEWYFDPE RFQPAALDNYQRLVLCDNGLYMDWDQYHSNYSTYESDLAYVKFCEELAHKTKWFQDYL VLIAVEDKITMGQWDKVKNTVYLQAMKIALRIRVVSLMQVMTAFQEYIWSMRFDCCNY KDFDGVYFEVWKRVAKQKMEFTDALSELYREDMFPLRNVDIKDELRSTRGRFRSMKEN YDLYVACIDETVPEKEARQLIKDAIIEMIPKPQTYLDYARNKIKIAEDIGLITKSRGP EPRT</aaseq>

Gene Sequence

<dnaseqindica>74..421#521..706#2235..2336#2416..2472#2554..2649#2727..2819#2936..3055#3146..3178#3257..3307#3943..4021#4120..4145#taaatcctcaagtcaacaagaaattagcaagccgaagaagaagaagaaacagaagaagaggcagaggcgcaagatggacgaatccacagaaaatctatcatgccacagtggtagcccatcctcttctcatgatggaacaagcacatcaacaatagagggggagccaaaaccatcttctggggaccttgccaagatttcacgagaacacaaacaagaacaagaatcaatggaggatttagaagatctccttggcatggatgaggataccatctcaaacaaagtcagttactactttcatcagttatatgttcaggaccatcttgatgatgatgatgatgatgattggcttgaatgcgatgggccacagcagctcactgagttgcatgagcagctggccttctaccgcatcataggttatgaggtatcttttatcatcacctgggatgagtaaagttatgtatattttagtttgatgcatctctctgcttgttataaactactttcctattgtctgttgcagttatcaaatggtagaaagcttgacgaactggatattgcaaaactgaaagagaagtaccctccctccattctttatgagaaggggtactttcagtactatgaggatagtcttgaatggtactttgatcctgaacgattccagcctgctgcccttgataactaccagcgtctagtgctttgtgataatgtaggtatcggcacttgactcctccatgacaactagcttaaatgcttatttttatcagtacttggtggtataatcaattgcgttgctgtacccatgctaccacaattttaatttacttaattaaacgaaaatattgtaaaggttaaaatttgggctagttatgttacattcttttgtaacattgttattgttaagagcgtttatactgttatatgaaaagaaatgcgtactgcatttataggattagggagtttaccttggacaacaataatatctactccctccatttcatattataagacgtttgacttgttttccttgtcaaactttattaagtttgactaagaaaaaagtcagacgactatgatatgaaatagaacggagggagtagtgcctaaatgatcaattactttcctaggatagagatagatatttagtatggtatctgtaatccctctatttcatattataaatcgttttgattttttttctagtcaaactttgttaaatctgactttgtagaaaaaattagcaacatctaaaacacgaaattaacttcattaaatgtaacgttgaataaattttaataatatgtttgttttgtgttaaaaaatgctactatattgtttttataaatttggtcaaacttaaaaaagtttgactataaaaaagtcaaaacgacttataatatgaaacggagggagtagctaggaaggtattggtttagttaggaattatggatatagtttgttatgaatgtagatatcaattgtattcttaagggacaagttaagcggcacatgtacttctgtataatcaagcaatacataattattgaaagttaggtctagcttgatcagagtcacctagcaatcaggacaagccctgcatcgatgagagcagtctcggttttatccctatctgacctttatggatgctgatctgacctctattaattttttgtttggtccgtttcacccctgggccttagtatttaactttttatcctaatcaatgttctcttgcaactgcaaaccatcaaatgcccattcatttataatttggagagatagaatcaaaataacattgtttgtctgccattttggacaatgataggtctgcatatgtgtgtttagccattgtggttactttcgttgacaaaagtagcaaatctaatggcatcaaagttttgaaatgttgaatgcacatgtttgattagagataaaaggaacataagtatttgattagagatatacttcgtttgttgactgactcatttgagatcactctattgatatattcagtaggatttgcatatgaaacttgctttttgccatgttatccgcaaactaacttggtagttcatatcatcaggcatgttggatactattgtttgcaagctggcattctgtgcaagtgccatatttctgcatttggtatattcttgttgtagatactgtttaggttagtacaagtgtcctagtagatgccacttgtgcaagtaatggacaatgtattctttgtgcagggtttgtacatggactgggatcaataccactcaaattatagtacctatgagagtgatctagcatatgtcaaattctgtgaagagctagcacataagactaaggtatgactgactcaaggtgaaaatactggccatatgccatctaatcatccttgtctgatgtcatttattcacatggcagtggtttcaagattatttggtactcattgctgttgaggataagataaccatgggtcaggtaaccatcccaaaagccatttgtgcaatgtatatttatgttataatgcgtcaattaatggcaactgtttccattgtttagtgggacaaagttaaaaatacagtttaccttcaagcaatgaagatcgcactacgcattcgtgttgtttctctaatgcaagttatgactgctttccaggtaatgcctcctgttaattttaattggcaagcataagtggtgatggtatttaacaatagtactatcttctaatttaggaatatatatggagcatgcggtttgattgttgtaactacaaggattttgatggtgtgtattttgaggtttggaagcgggttgctaagcagaaggttagattacctcaatgtgcagaactacgcagcttatggtgctcttttttttttctgttcgttctttgctttatattcttagtgatgtatacttatgctatttcatcttttgtcagatggaattcactgatgccctgtcagaactttatagagaagatatgtttcccttgcgcaatgttgatattaaggatgagcttcgcagtactcgagggagattccgttcgatgaaggaaaatgtaggttcctcttctcagtttcgttacatcaggatgattacaactcatcaatccatccatttttaattcttttttctttctgttgttcagtacgatctctacgtggcttgcattgatgaaacggtaagcatatacttttttgcatgaggttcatgctcaactgaaatatgttcttcacactaatggaacatctatgtgtaggtgccagaaaaggaagctcgtcaattgatcaaagatgccattatagaaatggttagttgatttatttccctatcaagcaaatgtatcctggggtataggtgatattttcctagtggaatacttcacccctaaagtattgaggatggtctacttgatcccctaagcatgaaactgggtattctaccccctgaaatataaaaatcggttcaaataactcctttgtagacgattttactgtgaacatgcatgatgatatggcggtggttttactatggagggtctaatgacatgatgatagctagactcgactaagttttttttttaataagttgaacggctttagaataatatacattgatgctaatatataatttttaggcataccaatcagcgagtgaaatttcgtaaagggttggactaatatttgtgccatgcaaataataatactgtcatgtcatcatttacatggcaaaacctccttaaaaaccatctagggggttatttgagctggttttcatacctaaggggctaaaatatccgatttcacacttacggggttaagtagaccaactccattactttaaggggtgaagtagactctttttctttcctagttgattatggtgttgagtgccttcaccaaatttttcttattttgctaacatggaggcgaattttatcttcagattccaaaaccacagacttatttggattacgccagaaacaagataaaaatcgcagaagatatcggtttgattaccaaaagtatgcatacacttctcaacagttgtatatgattatacatcactataacgggaacaatgtgtggattttagttctttttgtatcatttgcttatataggcagaggaccagagccaagaacctagaaggtcactgcacaacacagcccaggggagacaatagcgaggcaatgcatgccatggacaactaagcaaatggcggctgaaatctttttgagtatattattagtaataagaaaggatattggcgctacggtttattatcaaatttcttatttattatcttctgttgagatatgatacttttatcccgtgttacactgggcaaccctattacagtgtaatgttacggtcttattttttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0956500, RefSeq:Os01g0956500