Os01g0956700

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0956700| Description = Conserved hypothetical protein| Version = NM_001051977.1 GI:115442324 GeneID:4325414| Length = 3871 bp| Definition ...")
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Gene Name

Os01g0956700

Description

Conserved hypothetical protein

Version

NM_001051977.1 GI:115442324 GeneID:4325414

Length

3871 bp

Definition

Oryza sativa Japonica Group Os01g0956700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43957438..43961308

Sequence Coding Region

43958694..43958737,43958829..43958913,43958999..43959444,43959558..43959682,43959761..43960011

Expression

GEO Profiles:Os01g0956700

Genome Context

<gbrowseImage1> name=NC_008394:43957438..43961308 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43957438..43961308 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggaaaccacagttgatgttatgataagaaaaggaacaaacatgagactcgaaagctacgagtttttgagtgatttcaagcatggcaacgctgtggtactcctggactacacagagtccggaaacaaggggagtttcatcgtcacacaagttgatgggtcattcactgcctggtttgaaacaggtggaaaagagctctgctttgactcatctggtcatattactcagttatttaaagacatgattgtcgatttttacgatctgacctggagtttgcacaagaggcacttagtcatgcagaattttgtaaaggaaaatatatacgtcaaaatctttgatggcgtacccaaacttatgattctactaactgaagttaaattggttgatcagctagggccattcaaacaggactggagtcatgtccaaggcctcatgacttggtgtaaagaacaatctggtttaaaaatggactttcttaccaagagtttctatgatttcatcggatctaccgactgcacagtaatcaagctgagaaactaccctgatgattgggatgaaaaaaagaaaggtgattatttgctcacactcgcagaagtaaaccacggagttcttaaagataagttgaagagtagggatgattttcattggccgtttgtgaagctgcctaagctggagcagaacttaccaccaatgttacagcaaattcttagtggggagagacagatgaaaagaaagttcgacgtgacattcttttgtgattatatcaacctcttgagaaactcctacaagaaattcaatgaattaccagaaaatgttaaggctttatgcataaaccaggatggcttcattaaactgatagatgggtggtctcctgagttttggaccaagatctacgagaaaattgggtggccagattataatatctggaagtggccttgtaaaaaatag</cdnaseq>

Protein Sequence

<aaseq>MVETTVDVMIRKGTNMRLESYEFLSDFKHGNAVVLLDYTESGNK GSFIVTQVDGSFTAWFETGGKELCFDSSGHITQLFKDMIVDFYDLTWSLHKRHLVMQN FVKENIYVKIFDGVPKLMILLTEVKLVDQLGPFKQDWSHVQGLMTWCKEQSGLKMDFL TKSFYDFIGSTDCTVIKLRNYPDDWDEKKKGDYLLTLAEVNHGVLKDKLKSRDDFHWP FVKLPKLEQNLPPMLQQILSGERQMKRKFDVTFFCDYINLLRNSYKKFNELPENVKAL CINQDGFIKLIDGWSPEFWTKIYEKIGWPDYNIWKWPCKK</aaseq>

Gene Sequence

<dnaseqindica>2572..2615#2396..2480#1865..2310#1627..1751#1298..1548#gtctagcctcccactaatcccggtgccttcttgatcccaccgatccccgtgctttcttctcttcggcatcgccacgaagcggagggtgccatcgcagcagccatcgccgacgagcggctcacggtcactgcggcctcggcaacgtccggcgatcgtcgtcgatccttaccttactccctcacgccccctaggtatgaagccgccgtactccaacccaacttctatcgcctttgaaaccctaggcaggtaggcggttgctttgccttcggtgcggttgttgtgctgactctctcctcgccctcgccctcgccctcgccctcaccctcgtcgccggcgattcctccgccgtactccaaccctagctgtcgcctttgaaaccctaagtaggcacctaattaagtgctaactctttctgaatgtaatatcacaaatctttcccaactaattcagtagcattcggttaagcccaacaccatacagttgttggtactgaaacttttttcccccttttccgttatcttcagaagtaacaatcagtcagttacttcagtaacctgacacttgtgttctgattgcctgatccaagttgtgatcttagttatctgcttcttagcttgtgaatacgagtaagtagtagtaaaattggtgtgttttggtagattttgcttgtaattcctagcggttggtaacttggtatattcataattcggctaaggtttgataaaagctgcagtgctgcacatcagcctttttttccctgtgcacatttgcttttcttgtgtttatgctacttgcttgatttattgctattgttcctttgctcctggaggtggccaggggtagcctgcctgcctgcctcattcatgttttctatcatttagtggctattcgctttgaagaaattaatgatttatgcagctgttcctttaaataattattggttaatcccttgaatttatagctgtctcctcgagaagaatcctgcttaagttgatttacctccgggtgtttacggtctttcaaattgctaagcataatcttgaactttccaagaaaaaaaacaggcctgcattaactagtgccagggcagcaataatggatttgtgcgacgacactcatttcccatgggaggtaatttttttaaaaccagaatcagccaagcgccaaatttatgataattattcttcgcatatgtataattttgttccttgcaggggtcccatactattgttggcagcaagcggaaagctaaggatttaatggcaaaaatctgaacttgtttaatggaacttataagatggtggaaaccacagttgatgttatgataagaaaaggaacaaacatgagactcgaaagctacgagtttttgagtgatttcaagcatggcaacgctgtggtactcctggactacacagagtccggaaacaaggggagtttcatcgtcacacaagttgatgggtcattcactgcctggtttgaaacaggtggaaaagagctctgctttgactcatctggtcatattactcagttatttaaagacatgattgtgtgagtatctttattgttgtccatatttttaactttcttcttgttatgttctctgaaatcatttttatttgtgtgaagcgatttttacgatctgacctggagtttgcacaagaggcacttagtcatgcagaattttgtaaaggaaaatatatacgtcaaaatctttgatggcgtacccaaacttatgattctactaactgaaggtatatatttgttgctagtaacttaatggaagttcacagttttttttttatatataaacaatggcaatataacttgtacactggattgaaaatgcgatttaaattttgtacagttaaattggttgatcagctagggccattcaaacaggactggagtcatgtccaaggcctcatgacttggtgtaaagaacaatctggtttaaaaatggactttcttaccaagagtttctatgatttcatcggatctaccgactgcacagtaatcaagctgagaaactaccctgatgattgggatgaaaaaaagaaaggtgattatttgctcacactcgcagaagtaaaccacggagttcttaaagataagttgaagagtagggatgattttcattggccgtttgtgaagctgcctaagctggagcagaacttaccaccaatgttacagcaaattcttagtggggagagacagatgaaaagaaagttcgacgtgacattcttttgtgattatatcaacctcttgagaaactcctacaagaaattcaatgaattaccagaaaatgttaaggtaattgcttaagatgtttccagattgaataataccttcttttactgcaggatttgttgtattcaaacatcttatgttttgacaggctttatgcataaaccaggatggcttcattaaactgatagatgggtggtctcctgagttttggaccaagatctacgagaaaattggtaaaaacagtctgtgcctttggttttaggccttcgtttgactgtgctctttttggaataggggatttatgacggtgttctctttttgcagggtggccagattataatatctggaagtggccttgtaaaaaatagctttagtgctttgcatttgaccagtgagtactgcattaatacttaatgtatgattcctgtacgctttcagttcaagatataaccttagttatcattgttctatgtttgagtaccttattagattgctgcatttatatagcttgtttgggatatggatttccatccctcaaggggatgtcccctcgttgattgtatgtcatctaaatagttataaaaaaatttaaaaaaattgacaacatagattaatatgaaatatatcatgagaactgtggtgctcaattgttaagaggtaatgatctccttgtgagggctaattttgtgccggtttggtcgttgctgtgtagtggtaggaggttgtgggtggcaagctgttatgaaactcagatgttttttttcttccttttcagtcttttgtatcagactctgtaattcctgcttcaggtccttgatctaaaaaaaaagttcaatgggctttggaaaaatctaatactttctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatctagatagatatatatgtctaggttcattaacatcaaaatgaatgtgggaaatgttagaatgacttacattgtgaaacggagtgagtaactgctactcaaattctatgcacaaagatttgtactgtccagatgaaaaaaagggaacttggtgtgttttgtgctctaatcctgaaaaaatgttcagcacattctctatgaatgtcctgttgcaaaattcacctggtgtgtttcccgtgatgcttgtggctggagttttctcccctctgcttttgaatcttgtaatttctggagtagttgggctagccggctccaaaaggaacagaatcaaaatcctttgctttgctgctgtttgtttatcaactttggctgatgggcaacgatatgttttttcaaacaaaaactgttatctactcccccctgactttgattttccgtgtcatttcctccttgtttaggaacactgcttgatctcaatgatggcgatgccggtgcccgcgctgacattctcaggacatatggtgctgttctgcaggtccgatccttagatggctcctgttaggagtttttggttcttagaattatgttagatgctatctcgaaactctcaagtaattttttgtcctcctgcatgaagcaaaacttagtgtattggttgaaaatctggcatgattgaatggagaactatcgagattcattactgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0956700, RefSeq:Os01g0956700