Os01g0956800

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0956800| Description = Disease resistance protein family protein| Version = NM_001051978.2 GI:297598354 GeneID:4325415| Length = 5546 bp| ...")
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Gene Name

Os01g0956800

Description

Disease resistance protein family protein

Version

NM_001051978.2 GI:297598354 GeneID:4325415

Length

5546 bp

Definition

Oryza sativa Japonica Group Os01g0956800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43962946..43968491

Sequence Coding Region

43962946..43963021,43964070..43966856,43967066..43967134,43968403..43968491

Expression

GEO Profiles:Os01g0956800

Genome Context

<gbrowseImage1> name=NC_008394:43962946..43968491 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43962946..43968491 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgttctgaagcctcgcgaagtcgccgttggcgaaatcggggtggtcgttgcagctcgtcgacgcaaactagttcagctcccaatttcgacatcctttgtctcgttaattgaagcaacagctggttcaaaacattgccctatttgtcacctcgttttcctgttacacatgtatgttccaatgctgattgattccatatctagtactttggcatcccacttatggaatcctttggtcgcacgcctcagatatctaatagagatggaagaaaatattggaaagctggacaacactatcaaaaacctagaagttaggaaaaatgaaatccaaatccggcttagtatctctgaggggaagcaagaaacatgtaatcctgaagttacagaatggctacaaaaggtagcagcgatggaaactgaggtgaatgagataaaaaatgtgcagaggaagagaaagcaattattcagttattggtcaaagtacgaaattggcatgcaggctgcgaagaaactgaaggaagctgaaatgttgcatgaaaaaggtgcattcaaagaggtatcatttgaggtaccaccatatttcgtgcaagaagtgcccaccataccttcaactgaagaaacagagtgtaatttgaaagaagttctgcagtacctcaaagatgacaatgttggaattttagggatatggggaatgggaggagttggtaagaccaccttgctcagaaaaatcaacaatcacttcttaggtgtaaccaaagaaaattatggattcgaccttgttgtttatgtcgtggcatctacagccagtggaataggtcagcttcaagcagatattgctgaaaggatcgggctgttcctgaaaccaggttgtagcattaatatacgggcttcatttttgttaagttttttaaggagaaagaaattcttacttctgatagatgatttatggggttattttgatttagctgaagctggcattccatatcctaatggcctaaataagcagaaagtagttctggcaacacgttctgagagtgtttgtgggcatatgggagctcacaagacgatcttcatggaatgcttggaccaagaaaaagcttggcgattattcaaagaaaaagcaacagaagaagttattagttcagatgttaggattgaaagcctagcaaaggaagttgcagaagaatgtgggggtttgccccttgctcttgcaactcttggtcgtgcaatgtccacaaagaggactcgtcatgaatgggcacttgcactgtcatatctgaagaagtcccgcattcatgagatcccaaatatgggaaatactagtcacatatacactaggctaaaattaagttatgattatctgcaggataaacagatcaaatattgtttcttatgctgttctctgtggcctgaaggctactcaatttggaaagttgcactgatagactgttggatggggatgggtttgatagagtatgatactatagaggaagcatatgacaagggccactccatcattgagtacttgaaaaatgcttgcttattggaggctggctacttggaagatagggaggtgagaatacatgacattatccgagatatggcactgtcaatatcttctggctgtgttgaccaaagcatgaattggattgttcaggcaggggttggaattcataaaattgatagcagggatattgagaaatggaggtcagccagaaagatatcgctcatgtgcaattatatcagtgaacttcctcatgctatcagctgttacaatctccaatatctgtcactgcagcaaaacttttggttgaatgtgatcccaccttctctttttaaatgcttatcgtctgttacatacttggacttgtcttggattcccatcaaagaacttccagaagaaatcggcgcattagttgaactccaatgtctcaaactgaaccaaacactcattaaatcattgcctgtggcgattggccaattaacaaagttgaagtacctaaatttgagctacatggatttcttggagaagataccctatggtgttattccaaatttatcaaagctacaagtgttggacttatatggtagcaggtatgctggctgtgaagaggggtttcattcaagaagtcacatggattatgatgagtttagaatagaagagttatcttgcttaactagagaactaaaagctctgggaataacaatcaagaaagtgagtaccttgaagaagctccttgatattcatggaagtcacatgagattgcttggtctatataaattgagtggcgagacatctcttgcgctcactataccagatagtgtccttgttcttaatataacggactgttcagaattaaaggagttctctgtcacaaacaagccacagtgttatggagatcatcttccgaggctagagtttctcaccttttgggatcttccaagaattgagaagattagtatggggcatattcagaaccttcgtgtcctttatgtagggaaagcccatcaactgatggacatgtcctgcattctgaaactaccgcacctggagcaattggatgtgtctttctgcaataaaatgaaacagctagtccatataaagaataaaatcaatactgaagtacaagatgaaatgccaatccagggatttcgacgactgagaattttgcaattgaattcgttgccaagcttggaaaacttctgtaactttagcctagaccttccttctttggaatactttgatgtgtttgcttgtccgaagctgagaaggctgccttttgggcatgcaattgtcaaattaaagagtgtcatgggggagaaaacatggtgggacaatcttaaatgggatgatgaaaacactacaacactgtcttatcattctgtctacaagtgcaacaatgcttacgtgaggtgctcaaaggctcaagtcgacgaccagtcctcttccggtcttgagcgcttcactgctgaattggtagatttgggacagatgtataacgaccgtcgacgaggctag</cdnaseq>

Protein Sequence

<aaseq>MAVLKPREVAVGEIGVVVAARRRKLVQLPISTSFVSLIEATAGS KHCPICHLVFLLHMYVPMLIDSISSTLASHLWNPLVARLRYLIEMEENIGKLDNTIKN LEVRKNEIQIRLSISEGKQETCNPEVTEWLQKVAAMETEVNEIKNVQRKRKQLFSYWS KYEIGMQAAKKLKEAEMLHEKGAFKEVSFEVPPYFVQEVPTIPSTEETECNLKEVLQY LKDDNVGILGIWGMGGVGKTTLLRKINNHFLGVTKENYGFDLVVYVVASTASGIGQLQ ADIAERIGLFLKPGCSINIRASFLLSFLRRKKFLLLIDDLWGYFDLAEAGIPYPNGLN KQKVVLATRSESVCGHMGAHKTIFMECLDQEKAWRLFKEKATEEVISSDVRIESLAKE VAEECGGLPLALATLGRAMSTKRTRHEWALALSYLKKSRIHEIPNMGNTSHIYTRLKL SYDYLQDKQIKYCFLCCSLWPEGYSIWKVALIDCWMGMGLIEYDTIEEAYDKGHSIIE YLKNACLLEAGYLEDREVRIHDIIRDMALSISSGCVDQSMNWIVQAGVGIHKIDSRDI EKWRSARKISLMCNYISELPHAISCYNLQYLSLQQNFWLNVIPPSLFKCLSSVTYLDL SWIPIKELPEEIGALVELQCLKLNQTLIKSLPVAIGQLTKLKYLNLSYMDFLEKIPYG VIPNLSKLQVLDLYGSRYAGCEEGFHSRSHMDYDEFRIEELSCLTRELKALGITIKKV STLKKLLDIHGSHMRLLGLYKLSGETSLALTIPDSVLVLNITDCSELKEFSVTNKPQC YGDHLPRLEFLTFWDLPRIEKISMGHIQNLRVLYVGKAHQLMDMSCILKLPHLEQLDV SFCNKMKQLVHIKNKINTEVQDEMPIQGFRRLRILQLNSLPSLENFCNFSLDLPSLEY FDVFACPKLRRLPFGHAIVKLKSVMGEKTWWDNLKWDDENTTTLSYHSVYKCNNAYVR CSKAQVDDQSSSGLERFTAELVDLGQMYNDRRRG</aaseq>

Gene Sequence

<dnaseqindica>1..76#1125..3911#4121..4189#5458..5546#atggccgttctgaagcctcgcgaagtcgccgttggcgaaatcggggtggtcgttgcagctcgtcgacgcaaactaggtcagcgcaagcaggtagcagactagcagggggcagttttccgccaagtcaacgctgggaatttcgactgaagatcctgctgggaatgtcgccgtgtctgcaattcccagtgaagttccccccctccgaatcacaactaaatcacgcaaccattttgtggtttccttcctgtacagtgtctacggtctgcctctctttccctgtttcctgaaacttctcttgcagctcgagctaagctgatggccacattgtgctgagatctcctctagtggcctaattcagcatcctctcgtcgtgtcgagaccttctatccgtgactgtaagtactgatatccctttcgtttcctctttgggtgaccaatttgattctgaatatttttattaggacgatgcataattgatctgacaaattgtcgtgccatctgttcttctcttgattttgcttcacaacgtccacttgacatctcatcacccatgcattcaagataggtgtataatgtgcgttgagacgcctttcatgtgccctatcaattgctgatgaagttttaggttccctagtcaatatcaatatgatcttttagctctatctgttcctatttaggtttttttttgccggaatgaccgaaggaggtcattcaatctggtgttgttggcgcatagcagtgcttggcttctcctatttaggtttaactggaattactagtaagttatggaaatagatgacatcaacttattaaggatgctgatgacatgatgactataatgatcttcttcctgtttttgtaggatttcatcctaaaatagttttatagcttcaataaaatattcatcatataaatctttaacttcgatttgtcgtctaggttgaactacatatatcagaaataagatacataattttagtgctttactacagggattaaaaaaagagtacaacatgtattgggctttacatgcctgttcaaattatgtgtacatggtagaaagtacaggcataaagacatgcatattcgcacacttattataaattgcactttctcatatgcagttcagctcccaatttcgacatcctttgtctcgttaattgaagcaacagctggttcaaaacattgccctatttgtcacctcgttttcctgttacacatgtatgttccaatgctgattgattccatatctagtactttggcatcccacttatggaatcctttggtcgcacgcctcagatatctaatagagatggaagaaaatattggaaagctggacaacactatcaaaaacctagaagttaggaaaaatgaaatccaaatccggcttagtatctctgaggggaagcaagaaacatgtaatcctgaagttacagaatggctacaaaaggtagcagcgatggaaactgaggtgaatgagataaaaaatgtgcagaggaagagaaagcaattattcagttattggtcaaagtacgaaattggcatgcaggctgcgaagaaactgaaggaagctgaaatgttgcatgaaaaaggtgcattcaaagaggtatcatttgaggtaccaccatatttcgtgcaagaagtgcccaccataccttcaactgaagaaacagagtgtaatttgaaagaagttctgcagtacctcaaagatgacaatgttggaattttagggatatggggaatgggaggagttggtaagaccaccttgctcagaaaaatcaacaatcacttcttaggtgtaaccaaagaaaattatggattcgaccttgttgtttatgtcgtggcatctacagccagtggaataggtcagcttcaagcagatattgctgaaaggatcgggctgttcctgaaaccaggttgtagcattaatatacgggcttcatttttgttaagttttttaaggagaaagaaattcttacttctgatagatgatttatggggttattttgatttagctgaagctggcattccatatcctaatggcctaaataagcagaaagtagttctggcaacacgttctgagagtgtttgtgggcatatgggagctcacaagacgatcttcatggaatgcttggaccaagaaaaagcttggcgattattcaaagaaaaagcaacagaagaagttattagttcagatgttaggattgaaagcctagcaaaggaagttgcagaagaatgtgggggtttgccccttgctcttgcaactcttggtcgtgcaatgtccacaaagaggactcgtcatgaatgggcacttgcactgtcatatctgaagaagtcccgcattcatgagatcccaaatatgggaaatactagtcacatatacactaggctaaaattaagttatgattatctgcaggataaacagatcaaatattgtttcttatgctgttctctgtggcctgaaggctactcaatttggaaagttgcactgatagactgttggatggggatgggtttgatagagtatgatactatagaggaagcatatgacaagggccactccatcattgagtacttgaaaaatgcttgcttattggaggctggctacttggaagatagggaggtgagaatacatgacattatccgagatatggcactgtcaatatcttctggctgtgttgaccaaagcatgaattggattgttcaggcaggggttggaattcataaaattgatagcagggatattgagaaatggaggtcagccagaaagatatcgctcatgtgcaattatatcagtgaacttcctcatgctatcagctgttacaatctccaatatctgtcactgcagcaaaacttttggttgaatgtgatcccaccttctctttttaaatgcttatcgtctgttacatacttggacttgtcttggattcccatcaaagaacttccagaagaaatcggcgcattagttgaactccaatgtctcaaactgaaccaaacactcattaaatcattgcctgtggcgattggccaattaacaaagttgaagtacctaaatttgagctacatggatttcttggagaagataccctatggtgttattccaaatttatcaaagctacaagtgttggacttatatggtagcaggtatgctggctgtgaagaggggtttcattcaagaagtcacatggattatgatgagtttagaatagaagagttatcttgcttaactagagaactaaaagctctgggaataacaatcaagaaagtgagtaccttgaagaagctccttgatattcatggaagtcacatgagattgcttggtctatataaattgagtggcgagacatctcttgcgctcactataccagatagtgtccttgttcttaatataacggactgttcagaattaaaggagttctctgtcacaaacaagccacagtgttatggagatcatcttccgaggctagagtttctcaccttttgggatcttccaagaattgagaagattagtatggggcatattcagaaccttcgtgtcctttatgtagggaaagcccatcaactgatggacatgtcctgcattctgaaactaccgcacctggagcaattggatgtgtctttctgcaataaaatgaaacagctagtccatataaagaataaaatcaatactgaagtacaagatgaaatgccaatccagggatttcgacgactgagaattttgcaattgaattcgttgccaagcttggaaaacttctgtaactttagcctagaccttccttctttggaatactttgatgtgtttgcttgtccgaagctgagaaggctgccttttgggcatgcaattgtcaaattaaagagtgtcatgggggagaaaacatggtgggacaatcttaaatgggatgatgaaaacagtcccttattgctatttccattttttaaagcatcagaaactcgtatagcatccttaaggccggagctagatactagtgtagcatcctcacccaaagctttcttcaccaaaaggcagccctatttaagttcatcaattcgctacacatctttcctaaaatctatgtttgaagctgaggagtttagtagcctttagaatgtgggattgcagctacaacactgtcttatcattctgtctacaagtgcaacaatgcttacgtgaggtgctcaaaggctcaaggtatgtttttgtcttgttaatggttcacttgtgcgttgaattgttgatttggttgaacatgtaggttcatggatgctgatattcacttgctggtcaaaacgactaatgattatatgctttttaaaaatttaatcatatgaaaattacacaagcaatttattatactttcttttgtagttatacactgactacaaacaagctgtttccctctttgatttgctccacattgggcagggtcattttcgattttatcatatcagctcggcagtttgaattgaagatttgttctacaaaactgagttaaaaataatagttgtaaaaatgtaaggtgtaagttctgactaaaaagcttaccacctcacccttctggaccaactcggtttttctaaaagaaaaaaaaatgtctctgttttggtctcctccctttaaactttagttgacacagattacttgtgttcttgaccgttgtgaacggtcagagtggttattggttagagctcgtgctatgccagccagtaaacagttacgaccctctgaatatgaatatagtcaaacaaaggcatttctctgtattggttgaaccagtgaatgtttagtgtactacgtactactagttactaacacaagatagctagtgcaccagcaagttgctcacaaataagtaggatgattcaatctaagctgatcacacaccaactcactgaagtgttgtaagcactacgtggttagggaaatcgatatgcagtaattctagtattcctaatactaatgatgccttttttcccatgtctaatccattggcaggtggcacgtaacgacaatacaatggatctgttattattggtcattgtcagttccgagagctcatgttagtccttggacctatctactactaccatccattgactgattctatgttactctctccgcattttaatgtatgataccgttgactttttaactaacatttgaccatttgtcttatttaaattttttatgcaaatataaaaatacttatgtcatacttaaagaacatttgatgataaatcaagtcacaataaaataaatgataataacataaattttttaaataagacgaaaggtcgtttgtcaaaaaatcaatggcgtcatacgttaaaataaaatacggagggagtattttccatgagctccaagatgaaccggaaatacttggggaaaagaacaggtgaggagaggcgaagccaaccgccatctaacctgacgatggtacctcgtccaacgtccagtcgacgaccagtcctcttccggtcttgagcgcttcactgctgaattggtagatttgggacagatgtataacgaccgtcgacgaggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0956800, RefSeq:Os01g0956800