Os01g0957100

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0957100| Description = Protein kinase-like domain containing protein| Version = NM_001051980.1 GI:115442330 GeneID:4325381| Length = 3144 b...")
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Gene Name

Os01g0957100

Description

Protein kinase-like domain containing protein

Version

NM_001051980.1 GI:115442330 GeneID:4325381

Length

3144 bp

Definition

Oryza sativa Japonica Group Os01g0957100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43979354..43982497

Sequence Coding Region

43979356..43980605,43980720..43982241

Expression

GEO Profiles:Os01g0957100

Genome Context

<gbrowseImage1> name=NC_008394:43979354..43982497 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43979354..43982497 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaccgcctcgccgcgctccagtcgctctccgtcgcccgcaacaacctctccggcgagctccccccggggctctccctgctcgcctcgctccgctccatcgacctctcctacaacgccttctccggcccgctccccggcgacgtcccgctcctcgcctccctccgctacctcgacctcaccggcaatgccttctccggcccgctgcccgccacgttccccgccaccgtccgcttcctcatgctctccggcaaccagttctccggcccgctgccgcagggcctctccaagagctccttcctgctccacctcaacctgtccgggaaccagctctccggctcgccggacttcgccggcgcgctctggccgctctcgcgcctgcgcgccctcgacctctcccgcaaccagttctccggcaccgtcaccaccggcattgccaacctccacaacctcaagaccatcgacctcagcggcaacaggttcttcggcgccgtcccgagcgacattggcctgtgccctcacctcagcaccgtcgacataagctccaacgcgttcgacggccagctccctgactctatcgcccatctcggctcgctcgtctacttcgccgcgtccggcaaccgcttctccggcgatgtccctgcttggcttggcgacttggcggcgcttcagcacctcgatttctccgacaatgcgctcaccggccgcttgccggactcgctcgggaagctcaaggacctcaggtacctgagcatgtcagagaaccagctctccggtgccatcccggacgccatgtccggctgcacgaagctcgccgagcttcacctgagggccaacaacctcagcggcagcatcccggatgcactgttcgacgtcgggctggagacgctcgacatgtcgtcgaacgcgctctcgggcgtcctgccgtcgggctcgacgaagctggcggagaccctgcaatggctcgacctctccgtcaaccagatcaccggcggcatcccggcggagatggcgctcttcatgaacctccgctacctcaacctgtcccgcaacgacctccgcacccagctgccgccggagctcggccttctccgcaacctcaccgtgctcgacctccgcagcagcggcttgtacgggacaatgccgagcgacctgtgcgaggccggcagcctcgccgtgctccagctcgacggcaactccctcgccggccccatccccgacaacatcggcaactgttcgtccctctacctactgagcttggggcacaacagcttgacggggccgataccggtgggcatgtcggagctgaagaagctggagattctgaggctggagtacaacaacctgagcggcgagataccgcagcagctgggcgggatcgagagcctcctggcggtgaacgtctcgcacaaccgcctcgtaggccggctgccggcgtcgggcgtgttccagagcctcgacgcgagcgcgctggagggcaacctcggcatctgcagcccgctggtgacgcagccgtgcaggatgaacgtggccaagccgctcgtgctcgaccccaacgagtacccgcacggcggcgacggcgacaacaacctcgagaccagcggccgcggcccggcgtcgccgaggaaacggcggttcctgagcgtgtccgccatggtggccatctgcgcggcggtgttcatcatcctcggggtcatcgtcatcaccctgctcaacatgtcggcgcggcggagggccggcgacggcgggacgacgacgccggagaaggagctggagagcatcgtgtcaagctcgaccaagtccagcaagctcgccacgggcaagatggtgacgttcgggccgggcaacagcctccgttccgaggacttcgtgggcggcgccgacgcgctgctgagcaaggcgacggagatcggccgcggcgtgttcgggacggtgtaccgcgcgtccgtcggcgagggcagggtggtcgccatcaagaagctcgcgacggcgagcatcgtggagtcccgcgacgacttcgaccgcgaggtccgcatcctggggaaggcgaggcaccccaacctactccccctcaagggctactactggacgccgcagctccagctcctcatcaccgactacgcgccgcacggcagcctggaggcgcggctccacggcaacggcgacggcgcgttcccgccgctgacatgggcggagcggttccgcatcgtggccggcacggcgagggggctcgcgcacctgcaccagtcgttccggccgccgatgatccactacaacgtgaagccgagcaacatcctgctcgacgagcagtgcaacccgatggtcggcgacttcgggctggcgcggctgctgccgaagctggacaagcacgtgatgagcagccggttccagggcgggatggggtacgtggcgccggagctggcgtgccagagcctccggatcaacgagaagtgcgatatctacggcttcggcgtgctcatcctggagctcgtcacggggcggagggccgtcgagtacggcgacgacgacgtggtcatcctcatcgaccaggtccgcgtcctcctcgaccacggcggcggcagcaacgtgctggagtgcgtcgacccgagcatcggcgagttcccggaggaggaggtgctgccggtgctcaagctcgggatggtgtgcacgtcgcagatcccatccaaccgcccgtccatggccgaggtcgtccagatcctgcaggtcatcaaggcccccgtcgctgcatcgtcagccagaatcgaagctttctga</cdnaseq>

Protein Sequence

<aaseq>DRLAALQSLSVARNNLSGELPPGLSLLASLRSIDLSYNAFSGPL PGDVPLLASLRYLDLTGNAFSGPLPATFPATVRFLMLSGNQFSGPLPQGLSKSSFLLH LNLSGNQLSGSPDFAGALWPLSRLRALDLSRNQFSGTVTTGIANLHNLKTIDLSGNRF FGAVPSDIGLCPHLSTVDISSNAFDGQLPDSIAHLGSLVYFAASGNRFSGDVPAWLGD LAALQHLDFSDNALTGRLPDSLGKLKDLRYLSMSENQLSGAIPDAMSGCTKLAELHLR ANNLSGSIPDALFDVGLETLDMSSNALSGVLPSGSTKLAETLQWLDLSVNQITGGIPA EMALFMNLRYLNLSRNDLRTQLPPELGLLRNLTVLDLRSSGLYGTMPSDLCEAGSLAV LQLDGNSLAGPIPDNIGNCSSLYLLSLGHNSLTGPIPVGMSELKKLEILRLEYNNLSG EIPQQLGGIESLLAVNVSHNRLVGRLPASGVFQSLDASALEGNLGICSPLVTQPCRMN VAKPLVLDPNEYPHGGDGDNNLETSGRGPASPRKRRFLSVSAMVAICAAVFIILGVIV ITLLNMSARRRAGDGGTTTPEKELESIVSSSTKSSKLATGKMVTFGPGNSLRSEDFVG GADALLSKATEIGRGVFGTVYRASVGEGRVVAIKKLATASIVESRDDFDREVRILGKA RHPNLLPLKGYYWTPQLQLLITDYAPHGSLEARLHGNGDGAFPPLTWAERFRIVAGTA RGLAHLHQSFRPPMIHYNVKPSNILLDEQCNPMVGDFGLARLLPKLDKHVMSSRFQGG MGYVAPELACQSLRINEKCDIYGFGVLILELVTGRRAVEYGDDDVVILIDQVRVLLDH GGGSNVLECVDPSIGEFPEEEVLPVLKLGMVCTSQIPSNRPSMAEVVQILQVIKAPVA ASSARIEAF</aaseq>

Gene Sequence

<dnaseqindica>3..1252#1367..2888#tcgaccgcctcgccgcgctccagtcgctctccgtcgcccgcaacaacctctccggcgagctccccccggggctctccctgctcgcctcgctccgctccatcgacctctcctacaacgccttctccggcccgctccccggcgacgtcccgctcctcgcctccctccgctacctcgacctcaccggcaatgccttctccggcccgctgcccgccacgttccccgccaccgtccgcttcctcatgctctccggcaaccagttctccggcccgctgccgcagggcctctccaagagctccttcctgctccacctcaacctgtccgggaaccagctctccggctcgccggacttcgccggcgcgctctggccgctctcgcgcctgcgcgccctcgacctctcccgcaaccagttctccggcaccgtcaccaccggcattgccaacctccacaacctcaagaccatcgacctcagcggcaacaggttcttcggcgccgtcccgagcgacattggcctgtgccctcacctcagcaccgtcgacataagctccaacgcgttcgacggccagctccctgactctatcgcccatctcggctcgctcgtctacttcgccgcgtccggcaaccgcttctccggcgatgtccctgcttggcttggcgacttggcggcgcttcagcacctcgatttctccgacaatgcgctcaccggccgcttgccggactcgctcgggaagctcaaggacctcaggtacctgagcatgtcagagaaccagctctccggtgccatcccggacgccatgtccggctgcacgaagctcgccgagcttcacctgagggccaacaacctcagcggcagcatcccggatgcactgttcgacgtcgggctggagacgctcgacatgtcgtcgaacgcgctctcgggcgtcctgccgtcgggctcgacgaagctggcggagaccctgcaatggctcgacctctccgtcaaccagatcaccggcggcatcccggcggagatggcgctcttcatgaacctccgctacctcaacctgtcccgcaacgacctccgcacccagctgccgccggagctcggccttctccgcaacctcaccgtgctcgacctccgcagcagcggcttgtacgggacaatgccgagcgacctgtgcgaggccggcagcctcgccgtgctccagctcgacggcaactccctcgccggccccatccccgacaacatcggcaactgttcgtccctctacctactgtaagtcaacaaattgctaattacatttacaatatcgtcgttgcgttgaggttgaagacgaagacgacgaatcgcgtgacacgtttgatcgatgcatcgggtttgccatggcaggagcttggggcacaacagcttgacggggccgataccggtgggcatgtcggagctgaagaagctggagattctgaggctggagtacaacaacctgagcggcgagataccgcagcagctgggcgggatcgagagcctcctggcggtgaacgtctcgcacaaccgcctcgtaggccggctgccggcgtcgggcgtgttccagagcctcgacgcgagcgcgctggagggcaacctcggcatctgcagcccgctggtgacgcagccgtgcaggatgaacgtggccaagccgctcgtgctcgaccccaacgagtacccgcacggcggcgacggcgacaacaacctcgagaccagcggccgcggcccggcgtcgccgaggaaacggcggttcctgagcgtgtccgccatggtggccatctgcgcggcggtgttcatcatcctcggggtcatcgtcatcaccctgctcaacatgtcggcgcggcggagggccggcgacggcgggacgacgacgccggagaaggagctggagagcatcgtgtcaagctcgaccaagtccagcaagctcgccacgggcaagatggtgacgttcgggccgggcaacagcctccgttccgaggacttcgtgggcggcgccgacgcgctgctgagcaaggcgacggagatcggccgcggcgtgttcgggacggtgtaccgcgcgtccgtcggcgagggcagggtggtcgccatcaagaagctcgcgacggcgagcatcgtggagtcccgcgacgacttcgaccgcgaggtccgcatcctggggaaggcgaggcaccccaacctactccccctcaagggctactactggacgccgcagctccagctcctcatcaccgactacgcgccgcacggcagcctggaggcgcggctccacggcaacggcgacggcgcgttcccgccgctgacatgggcggagcggttccgcatcgtggccggcacggcgagggggctcgcgcacctgcaccagtcgttccggccgccgatgatccactacaacgtgaagccgagcaacatcctgctcgacgagcagtgcaacccgatggtcggcgacttcgggctggcgcggctgctgccgaagctggacaagcacgtgatgagcagccggttccagggcgggatggggtacgtggcgccggagctggcgtgccagagcctccggatcaacgagaagtgcgatatctacggcttcggcgtgctcatcctggagctcgtcacggggcggagggccgtcgagtacggcgacgacgacgtggtcatcctcatcgaccaggtccgcgtcctcctcgaccacggcggcggcagcaacgtgctggagtgcgtcgacccgagcatcggcgagttcccggaggaggaggtgctgccggtgctcaagctcgggatggtgtgcacgtcgcagatcccatccaaccgcccgtccatggccgaggtcgtccagatcctgcaggtcatcaaggcccccgtcgctgcatcgtcagccagaatcgaagctttctgaattctgatcgatctgacgacgccacatcattactcctactaaaccacagggttaatgattccaaatcatcgaatcgatcacttgcattgcattgcatgcatgcatccgcaagtactacgtgttccctagtgcaaaaattgaaaggtctgagcagtaggcagtaatagtagtacgtacaactgttcctgccgtgctaattttctcagggtctttttttgtctctgcttttggatgtcagataaatctcattattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0957100, RefSeq:Os01g0957100