Os01g0957200

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0957200| Description = Conserved hypothetical protein| Version = NM_001051981.1 GI:115442332 GeneID:4325382| Length = 3429 bp| Definition ...")
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Gene Name

Os01g0957200

Description

Conserved hypothetical protein

Version

NM_001051981.1 GI:115442332 GeneID:4325382

Length

3429 bp

Definition

Oryza sativa Japonica Group Os01g0957200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43985335..43988763

Sequence Coding Region

43985430..43985978,43986081..43986149,43986808..43986939,43987035..43987088,43987202..43987246
,43987871..43988010,43988265..43988390,43988473..43988527

Expression

GEO Profiles:Os01g0957200

Genome Context

<gbrowseImage1> name=NC_008394:43985335..43988763 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43985335..43988763 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccttccactacgcagcaatgccctcctcctcctcctcgtccctctccggcgtctcctcccagcccccgcttcacctcccccgtctccgatcccctcaccaagcgtcccgccgcctctccgcgctccccttctcccgcgcgctcccgcttcccctccgcctccgcctccgcattccccgtccccaacttcctccgctgcccctcgcgttctcccacggtgggggcggagataacgatggcgacgataataataacaatggcggcggagatggcgagggggatggcggcgcgcccgacaaccggagggaggcgctgttcgtgctcgcgcaactggggaggaagctcgagagcctgccgtccgacctcgcggccgccgtggagggtggccgcgtcacgggggagatcgtgcggcgcttcgctgagatggagggctcggcgctgctccggtggctgctccagttccaggggttcagggagcgcctcctggcggacgatctcttcctcgctaagcttgccatggagtgcggcgtcggcgtcatcgcaaagactgctgcggagtatgagaagagaagggagaattttgtcaaagagattgatatcgtgattgccgatgtggtcatggcaatagttgctgatttcatgcttgtctatcttcctgctccaactgtatctctgcaaccaccacttgcaacaaatgctgggcatattgctaattttttccacaattgcccggataatgctttccaaattgctttggctggaagatcatactcaattctgcagaggctaggggctattctgagaaatggtgcaaagcttttcactgtgggaactagtgcttctctgattggcaccggtgtcacgaatgcactgataaaagcaaggaaggctgttgacaaagagctagatgacgaagttgaagatattccagttttgtcaactagtgttgcttatggtgtatacatggcagtatctagtaacctcaggtaccagattttggctggtgtaatcgaacagaggatgctggagcccctactacataaccacaagcttctattgagtgctctatgctttgctgttcgcacgggcaacacattcttgggttctttactatgggttgactatgccaggtgggtaggcgtacaaaaggttcaagaagaggcctaa</cdnaseq>

Protein Sequence

<aaseq>MAFHYAAMPSSSSSSLSGVSSQPPLHLPRLRSPHQASRRLSALP FSRALPLPLRLRLRIPRPQLPPLPLAFSHGGGGDNDGDDNNNNGGGDGEGDGGAPDNR REALFVLAQLGRKLESLPSDLAAAVEGGRVTGEIVRRFAEMEGSALLRWLLQFQGFRE RLLADDLFLAKLAMECGVGVIAKTAAEYEKRRENFVKEIDIVIADVVMAIVADFMLVY LPAPTVSLQPPLATNAGHIANFFHNCPDNAFQIALAGRSYSILQRLGAILRNGAKLFT VGTSASLIGTGVTNALIKARKAVDKELDDEVEDIPVLSTSVAYGVYMAVSSNLRYQIL AGVIEQRMLEPLLHNHKLLLSALCFAVRTGNTFLGSLLWVDYARWVGVQKVQEEA</aaseq>

Gene Sequence

<dnaseqindica>96..644#747..815#1474..1605#1701..1754#1868..1912#2537..2676#2931..3056#3139..3193#ttcccctcgcatccgcgtctccaaaaacccccaactctgcactgcaccgaccgcgccgagaggagagacgagagcccccgagaccgcgcgccgccatggccttccactacgcagcaatgccctcctcctcctcctcgtccctctccggcgtctcctcccagcccccgcttcacctcccccgtctccgatcccctcaccaagcgtcccgccgcctctccgcgctccccttctcccgcgcgctcccgcttcccctccgcctccgcctccgcattccccgtccccaacttcctccgctgcccctcgcgttctcccacggtgggggcggagataacgatggcgacgataataataacaatggcggcggagatggcgagggggatggcggcgcgcccgacaaccggagggaggcgctgttcgtgctcgcgcaactggggaggaagctcgagagcctgccgtccgacctcgcggccgccgtggagggtggccgcgtcacgggggagatcgtgcggcgcttcgctgagatggagggctcggcgctgctccggtggctgctccagttccaggggttcagggagcgcctcctggcggacgatctcttcctcgctaagcttgccatggagtgcggcgtcggcgtcatcgcaaaggtcccatgacgaattctccctctacgtacttctattttggcatcattgcactgtgttatgttgccaatctgacgttttattcatgctgctctcgttgtttagactgctgcggagtatgagaagagaagggagaattttgtcaaagagattgatatcgtgattgccgatgtggtatgcttctgaaagtatttctaacaatttctgacaataaaacaaaagaatctagctcgatgtgatttcacttgtttggtttacattgggtgttactagaacaaccacttatttagcaaataattaccatgtggtataccgcttcatgttcagatgactagtactctaataacatatacatcatggaatttatttattgacctcgctttgtaaattagtcgctaagatcgttagctgatagacctttttttaaaaaaaaaaataatcatatgctgagtattatgttatcaggaactaataaagctggtgatctaaaccaaatagacttgaaaaaaaaatcttataatgtggtgatgtttggttttggaactatttctgaataatactaatagatactatgtggttgattaactgaattcagcattgaggtttgtactattaagtccatgtgagtaccacacctgattctagttgctattgaccatgagcgaacctatttttgctagcctaattttagtttaggaagagagtttatctcatgccatgggttcaattttactttctttctgaaggtaaatggataatgaaatttgaagttttttttttgttatgatttgtgaaatctaattttgtgttgcttctgatactacccatacaggtcatggcaatagttgctgatttcatgcttgtctatcttcctgctccaactgtatctctgcaaccaccacttgcaacaaatgctgggcatattgctaattttttccacaattgcccggataatgctttccaagtaacctaaactttctctcttttcatctgagtagaacattcttcctagaatcctccatgttttgctaaaaacacttcatgccaactgttctccagattgctttggctggaagatcatactcaattctgcagaggctaggggctattctggtatgcagttcttttgttgtggttattatgatacttagaccgtcggactcatagtggcctcagtctattcagtgtgctatattgatcaactaatgctagtggcttctttgcagagaaatggtgcaaagcttttcactgtgggaactagtgcttctctggtaagcttgccattttgttttgctgctacatcatatgattgtgatgatcatgtgttagcaacctcttttgatttgtgttagggtttgcatttgtttttattttctttgagcaggaatcctgtcatgaagttttaatcctgtcatgaagttttaaataaaacatttcagcaaggcaggaataaccaatgcgtcctggtgttttcattatgtctacctatctctgtcgttaagttttaattctagtgagtctgacaaagtatatgttgcacaaaagactggcagagtactgaggctgagatctaacctttttaaagaacagggtaactgttaactcatgtggatttctttcacagttaactgattttctgtagctcctagttggttctaaactgaaatttgaagcatgaaaactttacaagtgggatatattgaggaaaaaatggcattcataatcggtttcctagggtggctagttcaattgtttcactatgcaggtgttgttgccaaaaataaaaaagatcagtgatatacgtttctgttttggatggcagtaatctatcgacaccttttacccttctatccataagacaatttgttatgcatactaatcttcaatccttccagattggcaccggtgtcacgaatgcactgataaaagcaaggaaggctgttgacaaagagctagatgacgaagttgaagatattccagttttgtcaactagtgttgcttatggtgtatacatggcagtatctagtaacctcaggtaaacattatcttcaaactactcaccatttgtagcatacttaagtcatgctaaacgtgtgaataaatgtcctgtcgttttgttactaagggacctggaggacttaccccaccgttgaaattgttttacctgtttctctcttcaaacaggcaaaccgttgtagagattatacatgaacaatccttgtgcagataaacagttgcttcttttttaaatggattattttttacaacaaaaatcatattcatcaccaggtaccagattttggctggtgtaatcgaacagaggatgctggagcccctactacataaccacaagcttctattgagtgctctatgctttgctgttcgcacgggcaacacattcttgggttctttactgtgagtaatatttacctcgcatgaagtttaactcctgaccttggggcagtaatgttacttactgatgaacttttgttaccagatgggttgactatgccaggtgggtaggcgtacaaaaggttcaagaagaggcctaatgttggcataccgtaagttactacgatatgtattctacaacgtcacgacattcttctcttcatagggaacatctttactggtaaaggcagaagataggcatctccatatgtcgaattcatatcaacagtgtcaccgtatttttcttcatagcctgcaacttgtaagacttgtctttgtaatatacgagtttttgacccaacgagcactcggagggacctgtttattgtttgtcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0957200, RefSeq:Os01g0957200