Os01g0958100

From RiceWiki
Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0958100| Description = Similar to Chloroplast SRP receptor cpFtsY precursor| Version = NM_001051986.1 GI:115442342 GeneID:4325387| Length =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0958100

Description

Similar to Chloroplast SRP receptor cpFtsY precursor

Version

NM_001051986.1 GI:115442342 GeneID:4325387

Length

2794 bp

Definition

Oryza sativa Japonica Group Os01g0958100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44029446..44032239

Sequence Coding Region

44029620..44029733,44029820..44029882,44029972..44030040,44030204..44030286,44030381..44030449
,44030544..44030664,44030823..44030860,44031420..44031478,44031564..44031637
,44031729..44031831,44031943..44032125,44032170..44032237

Expression

GEO Profiles:Os01g0958100

Genome Context

<gbrowseImage1> name=NC_008394:44029446..44032239 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44029446..44032239 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cggcacactcccacgtcatccccttcctctccccggcggcgacgtccgcgcgctgctccccctacggcggcggggcaggcggggttcttcacccgcctgggacgcctcatccaggagaaggccaagagcgacgtcgagaagctcttctccggcttctccaagacccgcgagagcctctccgtcgtcgacgagctcctcacctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggctctgctggtgtcggattttggccccaagatttcgttccggatcgtggacactctacgcgaggaaatccgcgatggcaagctcaagtctggggctgagataaaggaagcgctgaaaaggtgtattcttgaactgctgacgagcaaaggcggcaatccggagctgcagctcggtttcagaaagccggcagttatcatgattgtgggagtgaatggaggtggaaagactacctcattaggaaaacttgcttacagattcaagaatgaaggagtgaaggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggcagagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcagttctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacgtcaggacgacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtcatagctaaagcccttccgggtgctcctaatgagatcttgctggttctggatggcacgactggcttgaatatgctacaacaagcgagggagttcaatgatgttgttggagtcacaggattcgtcctaacaaagcttgatggaactgctcgtggtggttgtgtggttagcgttgtagatgaacttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagccttttgatgctgaggcatttgttgaagccatttttccttga</cdnaseq>

Protein Sequence

<aaseq>RHTPTSSPSSPRRRRPRAAPPTAAGQAGFFTRLGRLIQEKAKSD VEKLFSGFSKTRESLSVVDELLTYWNLADTDRVLDELEEALLVSDFGPKISFRIVDTL REEIRDGKLKSGAEIKEALKRCILELLTSKGGNPELQLGFRKPAVIMIVGVNGGGKTT SLGKLAYRFKNEGVKVLMAAGDTFRAAARDQLEVWAERTGSEIVIDNDKKAKPASVLS QAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTT GLNMLQQAREFNDVVGVTGFVLTKLDGTARGGCVVSVVDELGIPVKFIGVGEGMEDLQ PFDAEAFVEAIFP</aaseq>

Gene Sequence

<dnaseqindica>2507..2620#2358..2420#2200..2268#1954..2036#1791..1859#1576..1696#1380..1417#762..820#603..676#409..511#115..297#3..70#ggcggcacactcccacgtcatccccttcctctccccggcggcgacgtccgcgcgctgctccccctacggccaccgccgccgcggccgcgcggggctcctgcggtgcgcggcggcggcggggcaggcggggttcttcacccgcctgggacgcctcatccaggagaaggccaagagcgacgtcgagaagctcttctccggcttctccaagacccgcgagagcctctccgtcgtcgacgagctcctcacctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggcgcgtcccctgctccactgctctgcatgctgttctctccttcttcactgttcggcgctgcttctgtcttcgttttttttgaatgtttcctgcttggtctcgtgcacgcaggctctgctggtgtcggattttggccccaagatttcgttccggatcgtggacactctacgcgaggaaatccgcgatggcaagctcaagtctggggctgagataaaggtcatttcagtttcctcttagtgtacattgacatcggcattgtgattggtctgatgattcattttgtcatctgtggtggttgattgtgcaggaagcgctgaaaaggtgtattcttgaactgctgacgagcaaaggcggcaatccggagctgcagctcggtttcaggttctgctttctcctgaattcctgctcagtgccatttgttgcttgctgtttgtaatttgagcaatgttgttcatcgttatggcagaaagccggcagttatcatgattgtgggagtgaatggaggtggaaagactacctcattaggtactcctcttgcatgcttggctttgttaagcttagatgtttttgttccattctgatagatggtcaataaacggtaacacactctcctatggtcctaccctagtaccctactatatggacaattgacattatgatgatgttctaaaggcacaacacatggttatataggcacgcaagtgcatttgtgaaggaaaagatatttggttataaaagcacaatactgtaattaggccatcacaagattatctcttatacaccaatgtactagttactcgaagtgaatttatcacgcctatgtaaggtattttcagctcaatgcaaaactacttgcatattaagcttggattgtggcatagcattggattaagcttctgcaggttatcttgtcgctttaaagctaatatggtacctagatagtaaggagctcctcaatatgcagttctggttcgggcattttctaccatctgcatctggcatcactatttagtttggaacgttttatacagcatgatgctttgaagtggaagattgatcttactccttttttatgtatttgtaggaaaacttgcttacagattcaagaatgaaggagtgaaggtgaggctattttctagacataccctggtttataggctagatgcatgggaattaaattcagctatgtacatattgcctcaccacattctctgaacatgtaatattgtacaatagatcaaaataatgagttcatgttcatgctttcaacaataatataggtattgatggcagcaggtgataccttcagagcagcagctcgtgaccagctagaagtttgggcagagagaacaggttcagagattgttatcgataatgataagaaagcaaaacctgcatcaggtatgattttttgatctgccaagcattgtgatcacactctgttctcataaggaggttagcttctatgtttcatctaatttgacttgcttggtagttctctcgcaggcagtgaagcgcgggaagcgtgaaggatttgatcttgttctttgcgacacgtcaggacgtatgattattttagtgactgagagcagaatatgcatatgtttggtgatttgctgattggttgaaatgactttgtttcagcacttatttttcaggacttcatacaaattatggtctgatggaagaattggtttcctgcaagaaagtcatagctaaagcccttccgggtgctcctaatgtatgctgtgtttacatgcaaaggacttgattttgtgttgattggatcattttggcatgtgcagtacttttgagggcaagcttagagaagcacggttatgattctaatacttcatagcgctctcattgttattaactactagcatatattccttgcttaacaggagatcttgctggttctggatggcacgactggcttgaatatgctacaacaagcgagggagttcaatgatgtaatcaccatttcctggttattttggtactcctgatttttcttttttttttcatcaagatataacgaactctgttggcttaatgccaggttgttggagtcacaggattcgtcctaacaaagcttgatggaactgctcgtggtggttgtgtggtatacacatattccttgccatatgcagtttataaacaacaacattttagtggttcacctgaattttgttgtttgatctattgcaggttagcgttgtagatgaacttggaattccagtaaagtttattggtgttggtgaagggatggaggatcttcagccttttgatgctgaggcatttgttgaagccatttttccttgagctaggacgctttgttttttgagatggagaatttgaagtttcggagagagcatgtttgcttacttgtacatcattctggtttttcactcctgtgacaatttcactatgtgtccatcctttcatgtaatatatatttgctaacatgctaggaaattagaagcaaaattttggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0958100, RefSeq:Os01g0958100