Os01g0960200

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0960200| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001051999.1 GI:115442368 GeneID:4325241| ...")
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Gene Name

Os01g0960200

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001051999.1 GI:115442368 GeneID:4325241

Length

2829 bp

Definition

Oryza sativa Japonica Group Os01g0960200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44120669..44123497

Sequence Coding Region

44120669..44121959,44122069..44122280,44122397..44122620,44122720..44123497

Expression

GEO Profiles:Os01g0960200

Genome Context

<gbrowseImage1> name=NC_008394:44120669..44123497 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44120669..44123497 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgcaccacctcgcacgacgcgttcgccgcagcgagggcgcgggcgcgggcgtcgtcgtcttcgttggagcggccgcggcgggcgcaggccgacccggccgcgctgtgccgcgagcgcgcggcgctgatccgcgccgcggccgaccggcgctacgcgctggcgtccgcgcacgccgcgtacttccgctcgctcgccgccgtcgggggcgcgctgcggcggtttgcggcggccgcgctcgcgccgggcaccccgccgtccggttcctccccggtgctcaccctcccgccgtccccggcgaagccggtcgacgcctcggccgccgcggccaggtcgagcctcccgccgtcgccgtcctcgtcctccaccgtctcgcctctctcgcacaccctctccgacgaggacctggacgcgcacggcgccgccaaacacgccaccgccgccgccgcgtcatcgacgaggtatcactaccactacatgaggaactctcccaccgtgcccaccacggtgtacgaggaccccaatggcgaggccagctatggtggctacggtggctacgggtacacgtattcgtacgggccctacggcgaggtggttgcggaggagaggccggagacggcgacgccgccgccaaccgcggaggtcgcggcgtgggacttcttcgaccccttcacctcctacgatcaattcatagaggattacaagggccacgacggcggcaacttgccttccaatagcccgaattactcggagctgaggagggtggaggggatcccggagctggaggacgaggcggagctcgaggcggcggaggcgaaggcgaaggcatccaaaccatcaacctccgtcgttgctgatcaaggtgggaaagggaagagaccaatttcttcagacgtcagctcgaagggggaggcttctgatgggaagctgctgcagaggaagggatccggtggcaatggcgagccagagaatgccagcttgaagggcagtggtagtggtgacaacaatggcagctccaccagcaagaagaaaggtatagccttcgatggcattgagcaaccgattgctgctgctcagggggaaggtgggagtggcaagtctgtgcagtcgactgctgtgagcagtgagtcgttctcgccgcttcaccaggggaacaggagtgtcatggaggccatggacgagatcaaggagaggttcgatgaggcgctgaactgcggcgaagaagtttccaagcttcttgaggtggggaaggttcccccccagagttccacgccccgagttcttagatatttgtcttccagagtgatggatcctctatctctgaccgtgccttcatcttcgtgcctgccgaagccacgtagaaagtcaagaacattgagcggaaaggccagcacttcatcaaatccatcagtagctggtagaagaaacagtgctggaagtctctcatcaactctggagaagctatgtgcttgggaaaagaagctttaccaggagattaaggatgaagagaagctgaggattctttatgaaaagaagtacaggaggctaaaatctctggacgaacgaggattagattcaactacgatcgacgccaccaggttatcagtaaggaacttgcaatccaggattaccatcaatattagaacagccaatgccttctcatcgaagatacagaatattcgagatgaagagctatatcctcaactcgttgatctcatcattggattgagaagaatgtggaaagctgttctattgtgtcacgagaagcagctatcggccattcaggacagcaaaatgcacctgatcaaggcagtgaccattagccaatccaatgctgctgcagtagccacagtagaattagagagggagcttgcaaaatggtaccgctgcttcaacaagtggatcagctcacagaggtcttatgctgaagcactgaacggatggctgaggaaatggctcactgagcctgaggtgcaggaggaaaacacaccggatggcgccccgcctttctccccaggcaagctaggcgccccgcctgtgtttgtcatatcaaatgattggctccaagtgattgagatggtttccaagaatgaagtgttgaagacaattgaccaattctccaagcttgtgcatgagtacaagaagacccaggaaaaggagcacaggcagaaacgaaaagctgatcatgcttcccgagattataacaaaaggcgcaaagttctgcagagggaacttgggttgagtaccagtcttgatatggttgcagtcatggagaacactcaccacagccatgacaaccgtgtaatcgagctagagaagatgagtagaaagaaggatgaggagaagaccaagcatgatgagattgtaaaacatgcccatcttgcagcttcagctactctaccagtcgggttggtccctgtgctgcaccagatcgtcagcttctcccaggaaaatgtgcaaaagtacacaagcatcagaacccgaggtgcccgggtccactga</cdnaseq>

Protein Sequence

<aaseq>MGCTTSHDAFAAARARARASSSSLERPRRAQADPAALCRERAAL IRAAADRRYALASAHAAYFRSLAAVGGALRRFAAAALAPGTPPSGSSPVLTLPPSPAK PVDASAAAARSSLPPSPSSSSTVSPLSHTLSDEDLDAHGAAKHATAAAASSTRYHYHY MRNSPTVPTTVYEDPNGEASYGGYGGYGYTYSYGPYGEVVAEERPETATPPPTAEVAA WDFFDPFTSYDQFIEDYKGHDGGNLPSNSPNYSELRRVEGIPELEDEAELEAAEAKAK ASKPSTSVVADQGGKGKRPISSDVSSKGEASDGKLLQRKGSGGNGEPENASLKGSGSG DNNGSSTSKKKGIAFDGIEQPIAAAQGEGGSGKSVQSTAVSSESFSPLHQGNRSVMEA MDEIKERFDEALNCGEEVSKLLEVGKVPPQSSTPRVLRYLSSRVMDPLSLTVPSSSCL PKPRRKSRTLSGKASTSSNPSVAGRRNSAGSLSSTLEKLCAWEKKLYQEIKDEEKLRI LYEKKYRRLKSLDERGLDSTTIDATRLSVRNLQSRITINIRTANAFSSKIQNIRDEEL YPQLVDLIIGLRRMWKAVLLCHEKQLSAIQDSKMHLIKAVTISQSNAAAVATVELERE LAKWYRCFNKWISSQRSYAEALNGWLRKWLTEPEVQEENTPDGAPPFSPGKLGAPPVF VISNDWLQVIEMVSKNEVLKTIDQFSKLVHEYKKTQEKEHRQKRKADHASRDYNKRRK VLQRELGLSTSLDMVAVMENTHHSHDNRVIELEKMSRKKDEEKTKHDEIVKHAHLAAS ATLPVGLVPVLHQIVSFSQENVQKYTSIRTRGARVH</aaseq>

Gene Sequence

<dnaseqindica>1..1291#1401..1612#1729..1952#2052..2829#atgggctgcaccacctcgcacgacgcgttcgccgcagcgagggcgcgggcgcgggcgtcgtcgtcttcgttggagcggccgcggcgggcgcaggccgacccggccgcgctgtgccgcgagcgcgcggcgctgatccgcgccgcggccgaccggcgctacgcgctggcgtccgcgcacgccgcgtacttccgctcgctcgccgccgtcgggggcgcgctgcggcggtttgcggcggccgcgctcgcgccgggcaccccgccgtccggttcctccccggtgctcaccctcccgccgtccccggcgaagccggtcgacgcctcggccgccgcggccaggtcgagcctcccgccgtcgccgtcctcgtcctccaccgtctcgcctctctcgcacaccctctccgacgaggacctggacgcgcacggcgccgccaaacacgccaccgccgccgccgcgtcatcgacgaggtatcactaccactacatgaggaactctcccaccgtgcccaccacggtgtacgaggaccccaatggcgaggccagctatggtggctacggtggctacgggtacacgtattcgtacgggccctacggcgaggtggttgcggaggagaggccggagacggcgacgccgccgccaaccgcggaggtcgcggcgtgggacttcttcgaccccttcacctcctacgatcaattcatagaggattacaagggccacgacggcggcaacttgccttccaatagcccgaattactcggagctgaggagggtggaggggatcccggagctggaggacgaggcggagctcgaggcggcggaggcgaaggcgaaggcatccaaaccatcaacctccgtcgttgctgatcaaggtgggaaagggaagagaccaatttcttcagacgtcagctcgaagggggaggcttctgatgggaagctgctgcagaggaagggatccggtggcaatggcgagccagagaatgccagcttgaagggcagtggtagtggtgacaacaatggcagctccaccagcaagaagaaaggtatagccttcgatggcattgagcaaccgattgctgctgctcagggggaaggtgggagtggcaagtctgtgcagtcgactgctgtgagcagtgagtcgttctcgccgcttcaccaggggaacaggagtgtcatggaggccatggacgagatcaaggagaggttcgatgaggcgctgaactgcggcgaagaagtttccaagcttcttgaggtggggaaggttcccccccagagttccacgccccgagttcttagatgtgggtaatgcatttgcattgtgtttcttactagctaccagtatcattttgatgcaactaggtaatgtgtgctagagcatttatagattttctcgtgttgtctctgcagatttgtcttccagagtgatggatcctctatctctgaccgtgccttcatcttcgtgcctgccgaagccacgtagaaagtcaagaacattgagcggaaaggccagcacttcatcaaatccatcagtagctggtagaagaaacagtgctggaagtctctcatcaactctggagaagctatgtgcttgggaaaagaagctttaccaggagattaaggtacacacataatctctgcaccagttatcgcatcatagaacaaagcataggtgttaattcatatgctatatgatttaccgccgaacacgtgtttgatggttaggtggttgttctaggatgaagagaagctgaggattctttatgaaaagaagtacaggaggctaaaatctctggacgaacgaggattagattcaactacgatcgacgccaccaggttatcagtaaggaacttgcaatccaggattaccatcaatattagaacagccaatgccttctcatcgaagatacagaatattcgagatgaagagctatatcctcaactcgttgatctcatcattgggtatgaaacttcatgatttctaattgtactactattcttcaacacttcaccctgatgacagtttcatctaatgaatacaatttgttgtcttgagtgcagattgagaagaatgtggaaagctgttctattgtgtcacgagaagcagctatcggccattcaggacagcaaaatgcacctgatcaaggcagtgaccattagccaatccaatgctgctgcagtagccacagtagaattagagagggagcttgcaaaatggtaccgctgcttcaacaagtggatcagctcacagaggtcttatgctgaagcactgaacggatggctgaggaaatggctcactgagcctgaggtgcaggaggaaaacacaccggatggcgccccgcctttctccccaggcaagctaggcgccccgcctgtgtttgtcatatcaaatgattggctccaagtgattgagatggtttccaagaatgaagtgttgaagacaattgaccaattctccaagcttgtgcatgagtacaagaagacccaggaaaaggagcacaggcagaaacgaaaagctgatcatgcttcccgagattataacaaaaggcgcaaagttctgcagagggaacttgggttgagtaccagtcttgatatggttgcagtcatggagaacactcaccacagccatgacaaccgtgtaatcgagctagagaagatgagtagaaagaaggatgaggagaagaccaagcatgatgagattgtaaaacatgcccatcttgcagcttcagctactctaccagtcgggttggtccctgtgctgcaccagatcgtcagcttctcccaggaaaatgtgcaaaagtacacaagcatcagaacccgaggtgcccgggtccactga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0960200, RefSeq:Os01g0960200