Os01g0960300

From RiceWiki
Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0960300| Description = Similar to Glucose inhibited division protein A| Version = NM_001052000.1 GI:115442370 GeneID:4325242| Length = 6468...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0960300

Description

Similar to Glucose inhibited division protein A

Version

NM_001052000.1 GI:115442370 GeneID:4325242

Length

6468 bp

Definition

Oryza sativa Japonica Group Os01g0960300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44124133..44130600

Sequence Coding Region

44124599..44124796,44125146..44125238,44125615..44125832,44125964..44126130,44126755..44126897
,44126980..44127198,44127463..44127543,44127690..44127869,44128459..44128789
,44129263..44129376,44129524..44129615,44130119..44130258,44130370..44130547

Expression

GEO Profiles:Os01g0960300

Genome Context

<gbrowseImage1> name=NC_008394:44124133..44130600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44124133..44130600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgctccgcctccgtccgccgccgcagccggccgccagcctcgcatccttcctccccttctcccccttcaggcgcttcctccactcgccgtcctggcgccctcctcctcctcctcctccgcgccgccaccgcctcctctccactgccgtcgcctcctcctcctcctcctccaaagtctcgacaagtcttgaggagcgatacgatgtgattgtggttggaggaggccatgccggatgtgaggccgcgcttgcgtcggctcgtcttggtgcgcgcaccctcctccttacgcttaacattgatcggattgcgtggcagccttgcaaccctgccgtgggagggcctgcaaagtctcaacttgttcatgaggtagatgcccttggtggtgaaatggggaaaattgcagacaggtgctacctacaaaagcgtgtgctaaacagctcaaaaggccctgctgtacgtgcactgcgtgctcagactgacaagagggagtatgcagtagagatgaagaaagttgttgaaagcacacaaaatcttttcattagagaggcaatggctacagaggttatgataggccagaacgacaatgttgagggtgtccgcactttcttcggcatggacttttatgcaccatctgttgtacttaccactggaacattcatgagtggtaagatttgggtaggtaggacttcaatgcctgccgggcgagctggagagtcagcttcacatggactcactgaaaacttgcagcagttgggttttgaaactgaccgcttaaaaactggcacaccaccacgaattgatcgcaggactgttaacttttctggattggaaccccagcatggtgatgaagaggttggctggtttagttttgatcctgaattccatattgagagggaccaaatgtgctgctatttaacaaggactacaaaagagacacatcaaattgttagagataacttggatgaaacaccaacttatggtggttgggtagaagcaaagggaccaagatactgtccagcaattgaagacaagattgtaaggttcaaagacaaagagtcccatcaggtatttcttgaaccagagggcagagatgttcctgagctttatctgcaggggttttccactgggcttcctgagcgattgcaattatcacttgtgagaacactaccgggactggagaattgtgtgatgctaaggccggcttatgctgttgaatatgattacttgccagcttaccagtgctcaagatcacttatgaccaagaagtttgagggcttattcttctctggccagattaacggaacaacaggatatgaagaagctgcagctcagggtataatttccggaataaatgcagctaggcattctgatggaaagccacttatcattcttgagagagaaagcagttatattgggactctgattgatgatcttgtcacaaaagatcttagggagccttatcgcatgttaacaagccgttcagaacaccgtctattgcttcgagctgataatgctgatagtcggttgactcctttgggacgagatattggtttgatagatgatagacgatgggagctttatcaatcaaagcaagcccggattaaagaggaaaaagaacgattgaaatctacaaaaatcccaggaggtgaatttgctgctgcggttacctctgtatccaaccaacctgtaaaagaatcatctacacttgaagccatactgaagaagccacatgtacagtataaacttcttgacaaacatggatatggaaatgaacatttgtctcgaattgagaaagaatgtgtggagattgatattaagtacgaaggttttatagcacggcagcaaagtcaattgcagcagattgtaaatcaggagcacaagaagcttcctgaagacttagattatcattcaatgacaaacctgtcacttgaagctcgtgagaaactttcaaaggtaaggccacaaacaataggccaggctagcagaattggcggggtgagcccagctgatatgactgttcttctcatttggatggagagcaaccgtcgcatggctaactacaagagacagcaaagcacgttgagatctgctgcgaccaaggcagatgattcttcagacgaagtggttcatgccagtgccaccaatgcataa</cdnaseq>

Protein Sequence

<aaseq>MLLRLRPPPQPAASLASFLPFSPFRRFLHSPSWRPPPPPPPRRH RLLSTAVASSSSSSKVSTSLEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDR IAWQPCNPAVGGPAKSQLVHEVDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQT DKREYAVEMKKVVESTQNLFIREAMATEVMIGQNDNVEGVRTFFGMDFYAPSVVLTTG TFMSGKIWVGRTSMPAGRAGESASHGLTENLQQLGFETDRLKTGTPPRIDRRTVNFSG LEPQHGDEEVGWFSFDPEFHIERDQMCCYLTRTTKETHQIVRDNLDETPTYGGWVEAK GPRYCPAIEDKIVRFKDKESHQVFLEPEGRDVPELYLQGFSTGLPERLQLSLVRTLPG LENCVMLRPAYAVEYDYLPAYQCSRSLMTKKFEGLFFSGQINGTTGYEEAAAQGIISG INAARHSDGKPLIILERESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRADNADS RLTPLGRDIGLIDDRRWELYQSKQARIKEEKERLKSTKIPGGEFAAAVTSVSNQPVKE SSTLEAILKKPHVQYKLLDKHGYGNEHLSRIEKECVEIDIKYEGFIARQQSQLQQIVN QEHKKLPEDLDYHSMTNLSLEAREKLSKVRPQTIGQASRIGGVSPADMTVLLIWMESN RRMANYKRQQSTLRSAATKADDSSDEVVHASATNA</aaseq>

Gene Sequence

<dnaseqindica>5805..6002#5363..5455#4769..4986#4471..4637#3704..3846#3403..3621#3058..3138#2732..2911#1812..2142#1225..1338#986..1077#343..482#54..231#agcgagccgcgaaaaattccgccgccgccgtttcgtcgacctcatcggcggccatgctgctccgcctccgtccgccgccgcagccggccgccagcctcgcatccttcctccccttctcccccttcaggcgcttcctccactcgccgtcctggcgccctcctcctcctcctcctccgcgccgccaccgcctcctctccactgccgtcgcctcctcctcctcctcctccaaaggtaacgctgctcacctcgtagtggtcgatggggatctgagtattcgcgaccacatgaaacaagcgaaaacgattctaattgatggatgggtttctgctattctggcattagtctcgacaagtcttgaggagcgatacgatgtgattgtggttggaggaggccatgccggatgtgaggccgcgcttgcgtcggctcgtcttggtgcgcgcaccctcctccttacgcttaacattgatcggattgcgtggcaggtctaacactgagctccattgcaatttttcacttactagatttcttcatttgtgtactaccatatccttccattagaccaaattgtactttctttatgattcctgtatcttggttacaaaagcaaagttaggtagtaaaagatcatatgctaaaaatatgtggtcattgattccttgtggcatagttagttaaaatctgcaatcatataccccatacaacatgaagcaagcaattgaaccatgtttcataagacttgtataagtgcatgtcaaatccacggatttttcttagaaaattatgatatggcatgtatagtggatgaaatgcttacatacatacatttttggaactcatagtacaaggatagtttccaacgtggtatgtcctcagtctaggctataaggatcttagcaaatcaacctttttaacaaagggaacattgtgttactattgtaatatggctacctgtcctaactcttcttttattccttatgttgcatagccttgcaaccctgccgtgggagggcctgcaaagtctcaacttgttcatgaggtagatgcccttggtggtgaaatggggaaaattgcagacaggtacatttaattggttcattattttagatagatagattttcttttcccctactttttggacttttagttggtgtgtaggtctgagagatgaaacctgcaccgaaatcctcaaagatctattgtcatactgattacttcatctcttaggtgctacctacaaaagcgtgtgctaaacagctcaaaaggccctgctgtacgtgcactgcgtgctcagactgacaagagggagtatgcagtagagatgaagaaagttgttgaaaggtcaatatgcactctcgtcttttatcagaatttacaaactatattcgaatttgtttgccttttaggtaaatcaaaagacaccaaactactccctcctgatttctgaataagagcgagcgtgctgtgtaaattctgaattggctggagttattcacgcgtttcagatattcttaagttgtacatggttatccacagagtcacaaggcttgtgttttattagtttaacctatgaagacaacttcattcatttgacatgtgttttgattggtcctgaccaaagactattgactagatgttaattctaatttcttgagtagaggtgaatctgtttctgcatatcttttacctataaattcaacaaatatagttgatgtgttcttgtgatatctagaaatatgttgttgttgaatgcaggtactttagtgtaatatctttcatgttatttactgattattgcatatgctatttttcagcacacaaaatcttttcattagagaggcaatggctacagaggttatgataggccagaacgacaatgttgagggtgtccgcactttcttcggcatggacttttatgcaccatctgttgtacttaccactggaacattcatgagtggtaagatttgggtaggtaggacttcaatgcctgccgggcgagctggagagtcagcttcacatggactcactgaaaacttgcagcagttgggttttgaaactgaccgcttaaaaactggcacaccaccacgaattgatcgcaggactgttaacttttctggattggaaccccagcatggtgatgaagaggtatggaacatctgacaatatgtatgagtgaagttttttgttattcgttatatacaagtgtcatcttccacttgtatctgaaaatgcaaattccgtcattcttatatacttttgcttctctctttcatttgccactttacatttcattgttaaagcaacgccttttgtactcttattagtaagatctagaagcactgtgcttctgttgtgacagttaatttggtttctctctgattagaagtcaaaatttcaaaagcaccccttgaatacagtgttcgttttatgtaatgattgatcaaagttgtgaacccttgtggataattgattcttttgctatcgatctggcacagaaaatagattgaatggactttgcacaatttgaaccttcttgttcaaatatttccaaatgtatgtggtattttctccgatagactttgaacaacatttcctgcacctgtagtatctgctgcatactttgtgcacttagttgcgtttatgaatctatgacttatcagctgcttaagtttgcagttcaagtttgctttgaccatatatgtaaatgttcaaaagatggtttctctttaaacaggttggctggtttagttttgatcctgaattccatattgagagggaccaaatgtgctgctatttaacaaggactacaaaagagacacatcaaattgttagagataacttggatgaaacaccaacttatggtggttgggtagaagcaaagggaccaagatactgtccagcaattgaagacaaggtataattctaccatctgagttttttagtttgttaaatggcagattattctattttagtacgtgtaatcaaacttattattgctaaggaagaggttgttcacgttatggcacaatcatgaggataaccagactatctttgcttcagattgtaaggttcaaagacaaagagtcccatcaggtatttcttgaaccagagggcagagatgttcctgagctttatctgcaggtcaatctacatccagaactccctctatccattcaacatattttatatcatggttgtatttattaatcatctattatggttctcttgtcccctattttttaaaaataatgccttctgcactgttttgcactctctagtcatatttattaatcatctattgtggttctccaatattctatcccccattttattgaaaataatgtcttctgcactgttgtttatcccaattccgaccactcaagatcatttgtacatcgtaagcaggggttttccactgggcttcctgagcgattgcaattatcacttgtgagaacactaccgggactggagaattgtgtgatgctaaggccggcttatgctgttgaatatgattacttgccagcttaccagtgctcaagatcacttatgaccaagaagtttgagggcttattcttctctggccagattaacggaacaacaggatatgaagaagctgcagctcaggttaatttattttctttgctgtgtttatatggttgttcaacaagtttttttgaatcctaagcttgcttacttttgtttacagggtataatttccggaataaatgcagctaggcattctgatggaaagccacttatcattcttgagagagaaagcagttatattgggactctgattgatgatcttgtcacaaaagatcttagggagccttatcgcatgttaacaaggtatgtttttttttctgtacgaatgctattagtatgatggttgtatttttcttttttagaaaatgcaggagaggtgtgtttcatttcattaagaaggaaaaaacaaacacccatacaatcagggctcacaagccctccacccaaacacacccacaaaaacatcacacaaggtgacgcacggccaatgatggttgtattaagctgaagcaattggtgatataactgtgtatcctaattagtactagattatgtgttactctgagaagctaagagtctgtgggcgccaatttgccatagaataatggtcataattctcattagataatgtgtaatcaaatgaactatttaaatggaggggccaatggtaacctgattagagatgtgttgcaataggatgttaatttttgatactctcttcggctaaatatcagaaacatgctatgctttgtacattgtgtaattcattagaaactagaaacttaacacattactagttcaatatgatcagggaaaaacagtcagccggtaagtggctttaccagtaggtactggtagcattatgatttcttgaatcataactttgttgacctttttttttttttgttgctacatacatacattcagccgttcagaacaccgtctattgcttcgagctgataatgctgatagtcggttgactcctttgggacgagatattggtttgatagatgatagacgatgggagctttatcaatcaaagcaagcccggattaaagaggaaaaagaacgattgaaatctacaaaaatcccaggtaaattctatcttttttgaaatgcttcatgaattcatgccaagttttaaaatgctagtaccaacatgcacttgctcagtatagtcactagcatgaattcagatgctctaactcggtatttccgttctcaggaggtgaatttgctgctgcggttacctctgtatccaaccaacctgtaaaagaatcatctacacttgaagccatactgaagaagccacatgtacagtataaacttcttgacaaacatggatatggaaatgaacatttgtctcgaattgagaaagaatgtgtggagattgatattaagtacgaaggttttatagcacggcagcaaagtcaattgcagcaggtaatttgctttgtggatcatgtgcatttgtcctacttcctaagatgcacttataagggaggctctttgaactgaaagaaaaaatgtgcataaacatttaagatgtaattcaatgcatattgaggaacttgtttagctctttggtagctgtattctgttgggcttcccaaattgggagcactagttgattatttatcagcttttgtgtagctgtgttctgttgggcctcctaacttgagagatgtagttgattatttatattcagcaatgtaatatagaattctgatgttgtttcatattcctttgtttaacacctcttgttttttctacctagaagatatgctgacccctcgttttatttttttctcttcatcagattgtaaatcaggagcacaagaagcttcctgaagacttagattatcattcaatgacaaacctgtcacttgaagctcgtgagaaactttcaaaggtgtgtgatcttcttcatgttaagaaccttatatagcagatgacctgtcaacatatataaatgaaatgcattatacggttctctatttgttgacacatgttatctacacctcagtcatctgagataatttgtttttaaaatgctttagaattctcaatatatcagctgctgaaggttctggtgatcatatcttgcctgaaattgtgtcgtgcacacgttatctaagttttacaatttggcaactgaatatcattcatgatctgtaagaaattcaagctgctagatttgcatttaatacaactaatttttttcaccgtgcaatgcaatttatattatgtggtatgtttaggtaaggccacaaacaataggccaggctagcagaattggcggggtgagcccagctgatatgactgttcttctcatttggatggagagcaaccgtcgcatggctaactacaagagacagcaaagcacgttgagatctgctgcgaccaaggcagatgattcttcagacgaagtggttcatgccagtgccaccaatgcataattgagcgccccccgactatatcaaccaactgaattggaccactggacttttctgagccaaaaatgtgtactctctgaagataatttccagacgcctgtggaagagttatacaggacatgcatcaaggcaccttttgctacttgaaggaagttggtggtggcctctgtcagttatggtgtttctcccctacgacgctgaattgctgatgtggttttagaatgtcggatcgtattggtaggatttactatatctttatagtggataagaatgtaaagagcgacaaaaatgaaagtggtagagcagagtagcaatgtttatgtatatatacatctaattcgcgaatgcaagggagcaatgtcatttacagagaagtgaatggtgtatgtaatctgtaaacagaatgagtataaagaggttgcagtatcactgtgtcctatcacagaagaggttgcagtgtctttgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0960300, RefSeq:Os01g0960300