Os01g0961600

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0961600| Description = Conserved hypothetical protein| Version = NM_001052009.1 GI:115442388 GeneID:4324546| Length = 7593 bp| Definition ...")
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Gene Name

Os01g0961600

Description

Conserved hypothetical protein

Version

NM_001052009.1 GI:115442388 GeneID:4324546

Length

7593 bp

Definition

Oryza sativa Japonica Group Os01g0961600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44188432..44196024

Sequence Coding Region

44190852..44190926,44191003..44191053,44191144..44191176,44191280..44191393,44191499..44191588
,44191661..44191756,44191851..44191892,44191986..44192096,44194746..44194928
,44195006..44195449

Expression

GEO Profiles:Os01g0961600

Genome Context

<gbrowseImage1> name=NC_008394:44188432..44196024 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44188432..44196024 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagggatgctgccatctgatcctccgggcagtgatgatgatggaaatggaacgaacatgtggacaggacagaaggacaagctggccctagacccttgtgtttccggtgacaccaatgagaatgcacatgcctgcacctcattgacagctgtgcatcaggttcttgaagaatctaccaacaatactgtgcatgctatggacatgggcgtagttacaaggcaagatgatccgctgaaagcctcagaagaagatatcaatcaacacaaagatgaacaagagctttggggcccaaacgtgcaaactagccaggacgactactttgattacgtcaagcagttgtctcccaacagtcgtcgcatagacaaatggtccttgctgagtcatgacgaaatgattgaggttaaggagcggcatgcacgctatcgcatcagattttgcaagatgctaaacaaagaatttgaggatacgatgaaggatccagcagagtactctcgaggcgaactgttgaaggagaattactttttgcgatatgagcgggatgaaactcttggttggtacttccatcctgtccacacctggcttgcaggcttgaatgactaccagaagctcgtcctcgtaaatcatgatgatagcactgaattccttgccagggatgactaccactcatgttttaatacatatgaagttgatgaggattatgtcaaatattgtgaagaactaccaaagaaaatcaagtggattggagactatgtagatttggatcggtcttctcaggagtggtcaaaaatggacaacactacgtttttccaagcgttaaagattgcaacaaacttttgccatatgactgttggtttagcccaatttgcatacatggagtatgtatgggacctgcgtgaaattagtcgccttaaggaatggccttatttcttacatgagatttggaagctagttgctaagcaaaagatgaatttcaatgatgctttgaaggtagtctatgaaatggatatgtttcatagtttcaaatttgcagtggaggctgaactaaatggggacaaattgtttggattggaatataggttctctatgtgctctaaggatatttctggtgatgttgaagagggtaaagctctagatttgattacaaaggcagtttacagagaatttcatcacactcagaccatgtgtgggtatgcggcgaagaagatggatatggcgaaaaagattggtttggtctag</cdnaseq>

Protein Sequence

<aaseq>MEGMLPSDPPGSDDDGNGTNMWTGQKDKLALDPCVSGDTNENAH ACTSLTAVHQVLEESTNNTVHAMDMGVVTRQDDPLKASEEDINQHKDEQELWGPNVQT SQDDYFDYVKQLSPNSRRIDKWSLLSHDEMIEVKERHARYRIRFCKMLNKEFEDTMKD PAEYSRGELLKENYFLRYERDETLGWYFHPVHTWLAGLNDYQKLVLVNHDDSTEFLAR DDYHSCFNTYEVDEDYVKYCEELPKKIKWIGDYVDLDRSSQEWSKMDNTTFFQALKIA TNFCHMTVGLAQFAYMEYVWDLREISRLKEWPYFLHEIWKLVAKQKMNFNDALKVVYE MDMFHSFKFAVEAELNGDKLFGLEYRFSMCSKDISGDVEEGKALDLITKAVYREFHHT QTMCGYAAKKMDMAKKIGLV</aaseq>

Gene Sequence

<dnaseqindica>5099..5173#4972..5022#4849..4881#4632..4745#4437..4526#4269..4364#4133..4174#3929..4039#1097..1279#576..1019#gtgagttcgcccgccgccgccgccatcccccatccatcccgcgagcgggcatgggcgccgtcgttcgtcctgctgcttccgcggcatcctggtgggcacatcctctgcctccaccgccgtctgcgccgatccccatccatcccgcgagcgagcaggggcgctgttgttcgtcctgctgcttccgccgcatcctggtgagcacatcctcggccgccgccgccgcctgcgccgatccccatccatcccgcgagcgagcagggacgccgtcgttcgccctgctgctgcttccgccgcatcctggtgagcacatcctctttcccatctctctgtacccgcgcactttttgtcgaatttgcgttaaccctagcttctgccttaaccttaatactaataacagtttgtttgttcccaaaaagtttaggggttcccatgttagatccgcccctgatagacatagacatactttggtttgcagcgtatctacaagtatgcaaatatgtgccctggagcacaaccctgaggaatatagaactaatatgaattatcgcagatcaccgatttgaaaatcgccgctgatggaagggatgctgccatctgatcctccgggcagtgatgatgatggaaatggaacgaacatgtggacaggacagaaggacaagctggccctagacccttgtgtttccggtgacaccaatgagaatgcacatgcctgcacctcattgacagctgtgcatcaggttcttgaagaatctaccaacaatactgtgcatgctatggacatgggcgtagttacaaggcaagatgatccgctgaaagcctcagaagaagatatcaatcaacacaaagatgaacaagagctttggggcccaaacgtgcaaactagccaggacgactactttgattacgtcaagcagttgtctcccaacagtcgtcgcatagacaaatggtccttgctgagtcatgacgaaatgattgaggttaaggagcggcatgcacgctatcgcatcagattttgcaaggtttaatgcttttttgttagctaattccatcctctgtttaatttgtgttaatatttttttctactttctatttccagatgctaaacaaagaatttgaggatacgatgaaggatccagcagagtactctcgaggcgaactgttgaaggagaattactttttgcgatatgagcgggatgaaactcttggttggtacttccatcctgtccacacctggcttgcaggcttgaatgactaccagaagctcgtcctcgtaaatcatgtaagtgcttgccatgtatgcaaatttacaaatctgattggatttaataaaaattcttgtaagtaactagagttcattgttcatagctgtgcgcaccgtagcacccacaaactggctgtatggctgcttaaatagtaagatagttcttgggtctgaattgtgcacgaaaacatttagctaatctacatatattattttggattgaagtacttcaagtactccaaatgtgaacaatttaatgccttccccaccgcgttttacttgatctttgcactgaaacagcaacccagtgctgagtgctcttaaagaaaatgatgggaagcgtacaaccatagtacaataaatcctggacagatgagtgacagaaacatgtatttcagtctgttaacgttttggatttgaagtctgctagttacctgaatacctggtgcctaataaagatcagcggagtattccttgctgaaattaagcaagaagaattaacaaatcttcaactctctccctccctctctttctctctctcgtgcgcgtatgctcgtccagattctacccatcatacatctcctttctccgccatgcaccctatcctcaaagcacagtttttctttctagctgccatctttagcctcttctgtggtgtttacgattatgtgctaagggacttaactaatgccttactgttggaaagctggtctgattcaaatcaactaaatatgttttagattaaacatgttcatttttcatttagggcctgcttgggagttacagacttttttttctcccttgtaaagaaagacccctgtaactttcggttaccaaaaataccggtgaaaatcaaaaccctcatgctggctgtttgggagaaaacaatggcaaagcctatgatttgaataacaatttcatatctgaacatcaatttgagagtcgggaccaaaaactggggaaactgacaggtaaaatcagatcaaataatcaaaacaagttccccatcatcaaaattggtccaacaattgtgattcaacaacagatctaaaatataattttttaacaacaacatcagaatggcagtcaacataagaacatcagtatgtcacctggacggatagatcagaagtagatattggagggggacgattcagcatccaagggagatttgagggcataatgagaagagatcatgtctagaacaacagcaacgacatagatttgaaagcatagccacattgacagcaagggcatggctttgaaaccaatcttgtgcgtcgtggatctgaaaccaatcatgtccaggatggtgccaacttcttggactgtggccgcaacatgccagctagagaggccggtgccggaatattgttgtggttgctcaaagggaggtcggagacccgaagagacgttggtggcttggaggaaggtcgggatgttgtgagaagaacggcgatggcgctgtgaagaaggaagaagtcgactcaacgtgcttggaccttgtagacgaacccgataagtgtcgtaaaaaaattgtggcctctgcagatggttattttttcttcgtggaatgggccaaaaccagtgtaaagttatttgatttccaacccatccaagcgcattttttctggcccagtccataaaactttttgggcttgtattttacacctgtattgggccaaatactagccttccaatcaggcccttagggtaaattgcaatatagccctcccccctcaaaacctgcaaggttgtctcacctggcaccctcaacttgcattttactttggtggccccttatattctacccttgtaggtgaaagaaacgttacaagtcactaaaacacattggaatggatctaacatggcttagttcatatactgattccattttaagtgttgctgagttgtgtagacctctttgttttcacaaggttgtggtttaagctttgaatcctcttgctgtaagttgaacaaaacagactttctcttttttctctttctttttgcccaaatagtccttaagataaccaggctctggtctcctatgtcagacactgacctagttcagttccaaatgtagttttgtcatatctttacttgcagaaatattatagaagcaggacagctactgatgaactccatgtctttctcccctaacaaaaaatgcttttaccatcggagatgggtggtcaaacattttatcattttggtgcatctttctagaatctagatgttcggattggttatattgcaatcatatgatatgataagagttggcacttggcacacagagcatcattatgatattacattaaactgttattttttatgaacatggctaggtcatgtcgcataccatgagaagtttagacaggaggtttttcttactgtggggtgcaagcagaaagtacccttgtgatattaaactgttgtattttttacgaactcagcttaagttgcatacctcagaccatttgataagatcaagatctttttgctagaagttgtggtccaacatgttcttcagcacatgccttgctcttttggagtttattaattagaaaaattattatcagctgcgtggtgatggacactgctctgttgaaacttgttagcattttctattattatcatctatgtcttttccccttctgaatgcaggatgatagcactgaattccttgccagggatgactaccactcatgttttaatacatatgaagttgatgaggattatgtcaaatattgtgaagaactaccaaagaaaatcaaggtatcaaccatgtgatcaagttattaatagttggtaaacttagccagtaacatggatttgtttttgtgctaataatcttttatccttggacagtggattggagactatgtagatttggatcggtcttctcaggaggtactaatataaagctggcctatagaaaattatgatttataggtgtatttgtccatacatagtgcatatcaggatgattaactttgctctttagtggtcaaaaatggacaacactacgtttttccaagcgttaaagattgcaacaaacttttgccatatgactgttggtttagcccaatttgcatacatggtaagaatttttctgttctatttagttttggttttcatggctggttttaacaattatatcctttcaattcaggagtatgtatgggacctgcgtgaaattagtcgccttaaggaatggccttatttcttacatgagatttggaagctagttgctaagcaaaaggttagcatcctagtttaatccattgttatttataaataaatcactaatgggtgtctatcagctggttatatattattgtttgtttcctttatatgaacatttcagatgaatttcaatgatgctttgaaggtagtctatgaaatggatatgtttcatagtttcaaatttgcagtggaggctgaactaaatggggacaaattgtttggattggaatatagggtaacttttattttggctattctgcaagctcatcttttaagatccgattaataattattttgctcatcttgctaatatttaatttttttttctccacgtctagttctctatgtgctctaaggatatttctggtgatgtaagtacaatgtcgtatagcatatatgtgtagttgaaatacattttttatgacgataatgtcatataatataatatattgttattttaggttgaagagggtaaagctctagatttgattacaaaggcagtttacagagaagtaatcagtgaaacacttaagctaaaaatgtttcttattctacaccctgcacagttctaattgattttgttttcagtttcatcacactcagaccatgtgtgggtatgcggcgaagaagatggatatggcgaaaaagattggtttggtctagctggtatgttattctcaatttcttataaagttaatgctactagcgtgggacgcgcgctgcacccgtggcattaaaaatggcagtctgtgattagttttgactaatatgattgggagaatttgctattgtaattattttttttagtgtagtgaggaaagaagtgttctgttgtgatgtatataagtcaatagttctgcaaggtatgaggggccaatttacatcatgaaatgaagtagtatgaaaaataaaaagcgttataagcgggaataaagattccaagtttctaggcccgaccatcctataatacactaatttcagcatgctattttgttgtacgaaagacttattaggttgatgcattgcaataattgtttcagatttgccagagaagaaagaaagaacattcaacaacagaagatcaatcctattaaaatttaaaatgctaactgagatgcattatgaagtttttaactaaatatttgtacattagatcactggcatatatcttgttctatctatgatgtacatataaaatgaaaattgaattttttgcagaatatcaacaatacatcatattgatcaacagaaccaaatttcaatagtaaaagtatgaaatcatgagcagtgcaaatttgggggaacatagcactaaaacataaagatggaacatttactttcgcttccttatcttcttctggtattgagcacggatgaactgtagatcatggattaaaagtaaacacaggtgggcatgaaacaatgaaatttatgtgtctagataaatgaagatgcacaccaaattttaagaagcaagcatgatggcagaagtgcatgctaaatttcatatagcagtggcctgcaaacctgatttcattgcaattatgtagctggcaggatagagggttgatagctagatatgtgtcatagttgcctaatgttccatgtaggacgcagtacttctattagtaaatacatagcatatgttctagcaaaggtgatagcagcatgaccacttatatacattaatattaggatgtaggtcttcagcaaaagagtcttgcttttaactttgtagctttattttggatgcctcctttcttctagcatgtacataggctttgtacaaacacccaaaatatctgttggatggctggacacaagcatctcattcactgcatggaaaaaaaaattagagcctaaagcttgtctatagctatatattgcttttgtattatggctgtcaaaatgcttaggtactgtcaagaaataggaggattacctttgatcctttgtgtgctgggaatgttctttgaatagcttcttagcaggtggagctggaactgaagctatagtgttggtcctgtgtaatattaggttataacagtcagttaaattaccaatattgtaagcatctatcactgatgcgctgtaggcaagcagtccataggtacctttttttgcttgcacttttgctaggcacagaagggctaataggtggatcatcaggtgtattgacaaaagttcctttgatcttataagatagataaatgtgttagtatctaatatgttatatggaagcaaagagatgtgacagtaccttatgttcagattcagattcagatggtccagctgcaggaagagatggatgttccaaagttttctgtccactctttggctttgtggccttgcaaaattaagtaggagattagattgcttgtaaggtagtgctgaaaataggctgaatattagtataactggtggaatactaaccttatcatcaatggaaggctgcattgtttgagattgcataggatatgctaagacaacatatttctttttggtggatcctgaggggttggacttgctagttggtgtgtcatctgctgcagcgctaacaacatattttgttggtgttgatagacttggctgtagagatgcactttgctttcctctggttgatgactgtgattcaatactgctttcgcttgctgcgggtggtgtttggagtgaagtgccagggctcagtggtacgatagttgaggtgcgtcctgaagcagacggtgagataggcaggaagtgctgttttggggcaccagatgatacaatgctattgacctgtaaggattcttgattccgtttaactgtgtgttcagtgaagctgacattccatacaaaggcttgatctacaagagcttggatctcagctgggataaagtcaggtggattttcttcgattagagactccactggtctgtgtattaggcgatgtgcaattcgtccgaagaggacaaatgcagcttcagaagtgttgtctgcggtagtgagcacaactttgtatctgtatgtgtacaatatatatggtcattacaatttgtattgggaattcataaatgtgtagaatattgtgtgcggtgtttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0961600, RefSeq:Os01g0961600