Os01g0962200

From RiceWiki
Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0962200| Description = Conserved hypothetical protein| Version = NM_001052011.1 GI:115442392 GeneID:4324549| Length = 3102 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0962200

Description

Conserved hypothetical protein

Version

NM_001052011.1 GI:115442392 GeneID:4324549

Length

3102 bp

Definition

Oryza sativa Japonica Group Os01g0962200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44208317..44211418

Sequence Coding Region

44208514..44208634,44209170..44209329,44209619..44209739,44209833..44209955,44210332..44210452
,44210533..44210632,44211183..44211321

Expression

GEO Profiles:Os01g0962200

Genome Context

<gbrowseImage1> name=NC_008394:44208317..44211418 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44208317..44211418 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtgagcaggaggaagaagtgggtggcgtgggtggcggcggtcaccatcttcgtcgtgctcatgctcgtcaccccggccatcccgcagaacgaggagtaccacgacttcgccgaccagcgccgcctcttcctcgggatccccaatacgctgaatgtgatttcaaacatccccttcttttttgtgggtgtcgttgggctcgtcttgtgccattacaaaaactacttcaggctaaactcgcaaggggagctctggagttggacactgttctttgctggtgtgactgctgttgcttttggttcatcctattatcatctcaaaccgaatgatgccacactagtttgggacagattgccgatgacaattgctttcacatctgtcatggccattttcattattgagagggttgatgatagggcaggaacaaagtccctagcacctcttgttattgctggtgcactaagcatcatgtattggaggttctttgacgatcttcgcccatatgcagtaattcagtttgttccatgcattgcaatacctgtgatggctattgtaattccaccaatgtatacacattcgagctattggctgtgggcagcaggattttacctccttgctaaggtagaagaggccgcagataaacctatatataaatggacccatcaaattgttagcggtcatactcttaagcatctagctgctgcaatggtgcctgtgttcttggcactcatgctggccaaaaggactgttgaaccagaaagggtaagtttattccagcggtggaaggtcaagttggttgcagtgagagagactcgattcaacaaggacaggaatacagtcgactacaactatattgcagtttccactacacctgaaccatag</cdnaseq>

Protein Sequence

<aaseq>MDVSRRKKWVAWVAAVTIFVVLMLVTPAIPQNEEYHDFADQRRL FLGIPNTLNVISNIPFFFVGVVGLVLCHYKNYFRLNSQGELWSWTLFFAGVTAVAFGS SYYHLKPNDATLVWDRLPMTIAFTSVMAIFIIERVDDRAGTKSLAPLVIAGALSIMYW RFFDDLRPYAVIQFVPCIAIPVMAIVIPPMYTHSSYWLWAAGFYLLAKVEEAADKPIY KWTHQIVSGHTLKHLAAAMVPVFLALMLAKRTVEPERVSLFQRWKVKLVAVRETRFNK DRNTVDYNYIAVSTTPEP</aaseq>

Gene Sequence

<dnaseqindica>2785..2905#2090..2249#1680..1800#1464..1586#967..1087#787..886#98..236#tcgccccgattccaattccaattccaccaccgatccatcgcgacagggaggaggcgacgaggagaagcggcggcggcggcggcggcagcgggcggcgatggatgtgagcaggaggaagaagtgggtggcgtgggtggcggcggtcaccatcttcgtcgtgctcatgctcgtcaccccggccatcccgcagaacgaggagtaccacgacttcgccgaccagcgccgcctcttcctcggtatgccacaaaccaaccctccctccccgccgcaaacctagggcggaccttcccttgcggccgccatagctcgccgtccgcggtattgagctcccgtctctccgagctattgagctctcggggtagcctccacccggcgccggcaagacgatccgcgagcaggagagcagcgattgtgccagtgcttgtccctgacggcgcaatggccaacgttgagtgacgagttgactcgaaatcgcgaattcgaggtcgcttgcatcgcctaaatcgatcccctttgtattcactacaaaaattgattgccctttgtttgcgctgggttcagcaagattagcttgttaggaaggattttgcaggctataccagtttcctgtttatttcacgaacccaaaataaacatgaatatagtataattgagggggaatttgaggcgcaaacgaatagagtttaaattttgcttatatgttcaataagagggttgcaatgcttgtaatcactacttgatgcactaagtttgcaaaatcatgtggattttttttttgttttgcagggatccccaatacgctgaatgtgatttcaaacatccccttcttttttgtgggtgtcgttgggctcgtcttgtgccattacaaaaactacttcaggctaaagttagaccattactggttcatcttctaattctagttaagattttgatgcactctgttgttaaccttccccttcctggcagctcgcaaggggagctctggagttggacactgttctttgctggtgtgactgctgttgcttttggttcatcctattatcatctcaaaccgaatgatgccacactagtttgggacagattgccggtgagttgtttctagacttacattgccttgctctaggatttgtacacaccccattatgttgaagctgtctcagaatgtcaatgcatacattttttttggtgggatagaattcaactcagatccttgtgtagtataatctgaatatgctatggccctgtttagatagtgttgttctgttgggtgtgatctgcttgaatcaaaacagggtaactaatccacttggatcttttgcctgatacgctctagtatatttggcttgttttcttcagaattgcctgtcagagacataaagcatgtcatcagttcataattttcacccttgcttttatcaatatttaatatgttaaaggatggcatatttgcttgttctatgtagatgacaattgctttcacatctgtcatggccattttcattattgagagggttgatgatagggcaggaacaaagtccctagcacctcttgttattgctggtgcactaagcatcatgtattggaggcaagcttctccaattgtttaaccatccttcctcagaaatattttctgtacttctttcacaccttccattttgctgccttaactcttatgtaggttctttgacgatcttcgcccatatgcagtaattcagtttgttccatgcattgcaatacctgtgatggctattgtaattccaccaatgtatacacattcgagctattggctgtgggcagcaggttagtgttattcttgatcaatagtatttgatctatgtaccttcattagcatttaggttgaaaaatgtggtatttgtggttcacctatatattatgaatcattcaattgatcatttctctgcacctaataactgttgatgatacttaaatggttttcattttaatctatttctacatatcataaattgattcgcagtgaccaagttaattgattggttttctggaaattcatacacaatcagcacctcaccatatttttctgttttctgatttctcaaaacaattccaggattttacctccttgctaaggtagaagaggccgcagataaacctatatataaatggacccatcaaattgttagcggtcatactcttaagcatctagctgctgcaatggtgcctgtgttcttggcactcatgctggccaaaaggactgttgaaccagaaaggtatgctttatatactggcgttttaagaaccacgtctttacttcgataagtgcatcattgggttcaactcttgaactgttcttctatttaagctgttgaatggaccttggtcagaattcagaagatatacttgcgttggcattgttactttgtcttaaggaattattccatcataaattattgagctatctgttctattaattttgcaaatgcaatcactatttgtttttgggaaaagaatgaagtttgttttccttcggttagaataaattcataaatgccgttgtaacttttgaattagtgtgttgtttgtttcgccagtaattccatggtggttctcccatagtcccatatctttgcttcttaggatgagcatatttcaaataattttatcccctccattgcaaacgatatctgttgtctgttgattgatttgtcagccttttttttagctctgttaatatcatgattaaatttatgaagtcttgcataactctaccccgtgtctcatgatatttttttttctggaatgcagggtaagtttattccagcggtggaaggtcaagttggttgcagtgagagagactcgattcaacaaggacaggaatacagtcgactacaactatattgcagtttccactacacctgaaccatagatgtattgttattatttttcatgactttaatttctgtacacatgtaagagaaatggcaccggccagcatagaaactagatcgatcagtgtacattacaatacgagacgcgtcatcgctgctaatcagaacgtgatggtgtcatggtgatgttgtatgataacccttcataaataaatcttgtgcatattattcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0962200, RefSeq:Os01g0962200