Os01g0962600

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0962600| Description = Similar to 40S ribosomal protein S10-1| Version = NM_001052015.1 GI:115442400 GeneID:4324553| Length = 2194 bp| Def...")
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Gene Name

Os01g0962600

Description

Similar to 40S ribosomal protein S10-1

Version

NM_001052015.1 GI:115442400 GeneID:4324553

Length

2194 bp

Definition

Oryza sativa Japonica Group Os01g0962600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44219998..44222191

Sequence Coding Region

44220270..44220338,44220695..44220830,44221314..44221596,44221947..44221995,44222102..44222104

Expression

GEO Profiles:Os01g0962600

Genome Context

<gbrowseImage1> name=NC_008394:44219998..44222191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44219998..44222191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatgagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaacttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctcgcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagggtgacaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccaggtgattttggtggcgagaagggtggtgctccagctgagttccagccatcttttaggggtagcagacctggctttggtcgtggcggtggtggcgcattcggtggtggcgcatcttccatggagtaa</cdnaseq>

Protein Sequence

<aaseq>MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVDVPNLEVIK LMQSFKSKEYVRETFSWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPF GSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRGSR PGFGRGGGGAFGGGASSME</aaseq>

Gene Sequence

<dnaseqindica>1854..1922#1362..1497#596..878#197..245#88..90#ccccgcctcgctgcttcgcctctcgttccccaaggccccgaagccgccggcgccgccgccctcctccggttcgagctctccgccaccatggtgagtagcgacctccgaaaccgagccacattcgtttgctccgctatgctctacccgttccgttgtctgacgcgatgccgcgctttgttttttttttgtgtcgcagatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatggtgagattctccccctttcttctcctctatacgccgactctgtacattgtgtatgtgctgatcgtgattgcaagcttcgacttgatgtggtgttgcagtagggtttaggtggttgcattcgcttgattccaatagggcagattttgattgcattgtctgcaattgttcattcactatggctgtctgaggtttataggtttgacgaattcagttacattgctcccagatttactccaaatattatgttgaaacatgttttatttgattggtcatgtatttgctgaaggcctgaatgatggtacctttatttgttatgagttgaagtgctaatttaattcaactatatgcagagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaacttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctcgcccattcggctctggccctcctggtgaccgccccaggtgagcatttattccttttgggtttatcatctgcatatgcgaatacggaaattggatgctattgctgtgatggatattctttaggtggtggtcctgttttcaaatatgcaaattgtgtagcgaccatgtaaaaattgttgaatggacatcagattagtttataggaaccttgcaatagtcatttattagtttgttgataaaaaatgttattgactctgaattgttgagtggggctgatttgtggcaacaaatttagattcattgatgtaattagttgaaaccatttaactgtgttgcaagtcttctcctcgaactgaacagagacctgttcttttggttgggatttcaattttttacacataccgtatctaatcttcctaacatgtactcaaatgatataatctggctgcttttgtttatgaatgtattgcctgaaaactctagtggagacactgatattatccttttctgttcgtgtggcagaggcccgcctcgctttgagggtgacaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccaggtgattttggtggcgagaagggtggtgctccagctgagttccagccatcttttagggtaagagctctaatgaccatctgcatacctatatgccattgctaggttcatccagactgctcatagataatttattggcttaataatttggaacatttgaatgggtttagaccatgcattttcttctgtttgccttgaactttagcacgtcatgtttccatccttgtatttgttcaaactgttgtgtccttgcttgtataggttgagtatccatcttaggctgtgttaatagattttatgttaggacatgtaaacatatagcatgttcaggaacccttgtgttgacagcagtgatattcataaaagtagctgcttgtagactaacttgataccccttgtaaatcttggatgttcagggtagcagacctggctttggtcgtggcggtggtggcgcattcggtggtggcgcatcttccatggagtaaagcttgatcgggacggagcatattgttttgcccaatggcttatgagatgcaatgcgcgggggtcgtcttcactgttggtctttgaattgtgggaacaatgagaatttttgtttatgaaattgtagctgaggttgttctagacatggctgtgttatgccttttgttctgttagatatcactctcgaaatgaatctgttggtttgaccgagaatcttttagaatgttatgagcaagctgccatttaatcaaaaattcatctcattttcatgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0962600, RefSeq:Os01g0962600