Os01g0962900

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0962900| Description = Similar to Peroxidase BP 1 precursor| Version = NM_001052017.2 GI:297598376 GeneID:4324555| Length = 1232 bp| Defin...")
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Gene Name

Os01g0962900

Description

Similar to Peroxidase BP 1 precursor

Version

NM_001052017.2 GI:297598376 GeneID:4324555

Length

1232 bp

Definition

Oryza sativa Japonica Group Os01g0962900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44231435..44232666

Sequence Coding Region

44231435..44231632,44231893..44232666

Expression

GEO Profiles:Os01g0962900

Genome Context

<gbrowseImage1> name=NC_008394:44231435..44232666 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44231435..44232666 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagaaaaatgagcagcacgttgcaggttttggtcgtttcctgctgcagcttgctgcttctgtgtgctccggcggcctccgccggcgattacccgccgacggcgaagggcttgtcgtacggtttctaccagaggagctgtcccaaggcggagaccatcgtgaggagcttcctcaagaaggccatccgcaacgacggttgcgacgcgtcggtgctgttggcgcgcacggcgacggaggcgagcgagctggacgctccacccaacgagaccatccgcccgtcggcgttgatggccgtcgcccaactccgcgccctgctcgacgacgcgtgcagcggggccgtcgtctcctgcgctgacatcctcaccctcgccgcgcgcgactccgtccgcctggtcggcgggccggagtacagggtccccctgggccggcgcgacggcgcgacgatcgcggcgagggagcgcgtcgtcgccgcgttcccgccgccgagctccaacgtgacggcgctcctcgccgccgtggccaagatcggcctcgacgccgccgacctcgtggcgctctccggcgcgcacacgctcggcgtctcccgctgcatctccttcgacgaccgcctcttcccgcaggtggacgccaccatggacgcgcggttcgccgcccacctcaggctctcctgcccggccaagaacaccaccaacaccaccgccatcgacgtacggacgcccaacgccttcgacaacaagtactacgtcgacctgctcagccggcaggggctcctgacctccgatcaggtgctgttcagcgacggcaggacgaggggcctcgtcggcaggttcgccgtcgaccagccggagttcttccgccgcttcgccttctccatggtgaagatgtcgcagatccaggtgatgacgggagtgcagggggagatccgcaccaactgctcggtgcgcaacgccgccggcggtggcacctag</cdnaseq>

Protein Sequence

<aaseq>MARKMSSTLQVLVVSCCSLLLLCAPAASAGDYPPTAKGLSYGFY QRSCPKAETIVRSFLKKAIRNDGCDASVLLARTATEASELDAPPNETIRPSALMAVAQ LRALLDDACSGAVVSCADILTLAARDSVRLVGGPEYRVPLGRRDGATIAARERVVAAF PPPSSNVTALLAAVAKIGLDAADLVALSGAHTLGVSRCISFDDRLFPQVDATMDARFA AHLRLSCPAKNTTNTTAIDVRTPNAFDNKYYVDLLSRQGLLTSDQVLFSDGRTRGLVG RFAVDQPEFFRRFAFSMVKMSQIQVMTGVQGEIRTNCSVRNAAGGGT</aaseq>

Gene Sequence

<dnaseqindica>1..198#459..1232#atggcgagaaaaatgagcagcacgttgcaggttttggtcgtttcctgctgcagcttgctgcttctgtgtgctccggcggcctccgccggcgattacccgccgacggcgaagggcttgtcgtacggtttctaccagaggagctgtcccaaggcggagaccatcgtgaggagcttcctcaagaaggccatccgcaacgacgtcggcctcgcccccggcctcatccgtctccacttccatgactgcttcgtccaggcaattaactaattgattaaaattaattgattatacacctaatcatgcataatgcatgtgcaaaatgatgaaattacgcctcaaacatgctctgaattttgaattctggattgaacagatcgatcgatactatatttaaacacgcatctgtgacgggtaattattcgcgaaccgccactaataattgtgctgcgctgtgcgtgcagggttgcgacgcgtcggtgctgttggcgcgcacggcgacggaggcgagcgagctggacgctccacccaacgagaccatccgcccgtcggcgttgatggccgtcgcccaactccgcgccctgctcgacgacgcgtgcagcggggccgtcgtctcctgcgctgacatcctcaccctcgccgcgcgcgactccgtccgcctggtcggcgggccggagtacagggtccccctgggccggcgcgacggcgcgacgatcgcggcgagggagcgcgtcgtcgccgcgttcccgccgccgagctccaacgtgacggcgctcctcgccgccgtggccaagatcggcctcgacgccgccgacctcgtggcgctctccggcgcgcacacgctcggcgtctcccgctgcatctccttcgacgaccgcctcttcccgcaggtggacgccaccatggacgcgcggttcgccgcccacctcaggctctcctgcccggccaagaacaccaccaacaccaccgccatcgacgtacggacgcccaacgccttcgacaacaagtactacgtcgacctgctcagccggcaggggctcctgacctccgatcaggtgctgttcagcgacggcaggacgaggggcctcgtcggcaggttcgccgtcgaccagccggagttcttccgccgcttcgccttctccatggtgaagatgtcgcagatccaggtgatgacgggagtgcagggggagatccgcaccaactgctcggtgcgcaacgccgccggcggtggcacctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0962900, RefSeq:Os01g0962900