Os01g0966000

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0966000| Description = Similar to Plasma membrane H+-ATPase (EC 3.6.1.3)| Version = NM_001185830.1 GI:297720794 GeneID:9270353| Length = 43...")
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Gene Name

Os01g0966000

Description

Similar to Plasma membrane H+-ATPase (EC 3.6.1.3)

Version

NM_001185830.1 GI:297720794 GeneID:9270353

Length

4349 bp

Definition

Oryza sativa Japonica Group Os01g0966000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44385727..44390075

Sequence Coding Region

44386030..44386185,44386277..44386395,44386483..44386630

Expression

GEO Profiles:Os01g0966000

Genome Context

<gbrowseImage1> name=NC_008394:44385727..44390075 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44385727..44390075 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggttataatcatgttcccaatccagcaccggtcatacggagatggaatcaacaatgttcttgttcttctgagaggagggataccgatcgcaatgcctactgttctgtcagtcacacttgcaataggttctcatcacctgtctcaacaggtgctatcactaaaaggatgacagccatagaagaaatggcaggaatggatgttctctgctgtgacaaaattggaactctcactctcaaccatctcactgttgacaaaaacctaattgaggtttccggtggacgccggcatgttcccggagcacaagtacgagatcgtgaggatcattcaacgggagggccacctgtgcgggatgaccggcaacggcatgaacgcgctggcgctgaagaaggccgacatcggcacagccaacatcgcacgcgctag</cdnaseq>

Protein Sequence

<aaseq>GYNHVPNPAPVIRRWNQQCSCSSERRDTDRNAYCSVSHTCNRFS SPVSTGAITKRMTAIEEMAGMDVLCCDKIGTLTLNHLTVDKNLIEVSGGRRHVPGAQV RDREDHSTGGPPVRDDRQRHERAGAEEGRHRHSQHRTR</aaseq>

Gene Sequence

<dnaseqindica>3891..4046#3681..3799#3446..3593#gctgatgtggtccaactttctatcttcaatcatcgattcatgggtattgctgaacagatgggtcgaacacttcaaagaacttctatttctaccaatataaaggaaagactggacttttcttgtgctctctttggtccggatggtggccttgtcgcaaatgcccctcatgtccctgtgcatttgggagccatgtctagcaccgtgcgttggcaactcaaatattggggtgataatctccatgagggtgatgttcttgtaacgaatcatccatgttctgggggtagccatcttccagacataacagttgtcacacctgttttcaatgaaggtaaagttatcttctttgttgctagtagaggtcaccatgcagagatcggtggtatcaccccaggaagcatgcctcctttctcaaaaagcatctgggaggaaggtgctgccatcaaagcatttaaacttgttgagagaggtgttttccaagaggaaggaataattcacttgctacagtcaccgtcctatgatgaacttacaaaccataagattccaggaacacgtaagatccaagataatctttctgacctccatgctcaggtggcagcaaaccagcggggaataacacttatcaaagaactgataaatcagtatggtttgatcactgttcaatcttatatgaatcatgtccaaaacaatgctgaagaagctgttagagaaatgcttaaggtagttgcatcgagagttgaaaaggagaatgggtcttgtgtcatcgaagatgaagattacatggatgatggttctgtgctccatttgaagctcacccttgattcaagtaaaggcgaagcaacctttgactttgaaggcaccagtcctgaggtgtatggtaactggaatgctcctgaagcagtaacagcggctgctgtgatatactgcttacggtgcttggtcgacgttgatatacctctaaatcaaggctgcctagctcctgtgaagatcctaattcctaaaggctctttcctttctccaagtgacaaagctgcagtggttggtggtaatgtattgacctctcagagagtgacggacgtagtcctaatggctttccaagcatgcgcctgctcccagggttgcatgaacaatttgacatttggagacgacaccttcggttactatgagaccattggaggcggttcaggagctggggcgagttgggatggtacaagtggtgttcagtgtcacatgacaaacacaaggatgactgacccagagatctttgagcagcgataccctgttcttttacatagatttagcatcagggagaacagtggaggttctggtttccacagaggtggtgatggccttgtgagagagattgaattttgccagcctgttgttgtgagcattctttcagagagaagggtgcatgctcccaggggactgaagggaggaagaaatggggcccgtggtgcaaactatctcgtcaagaaagatggtcgtagagtttaccttggagggaagaacactgttatggttaatgctggtgagattcttcagattctcactcctggtggtggtggttttggctctccttgatggctattcttgtggacgatcatctacctcgcttctgggtattgtcatttctacttctttagtcctacttttatccacaaataaaacatgcagaaggcagaaacttgcacaaatattgcctgatacagatccaaactgtcattgttgcttctgggacattggagctgaataaggaagcatgttgcttgtttacctcactgttgttcaacttaataatgtttttttttgataaaggaagcttttattaatctcagacgattacatcaagttgatagaaccatactaagaaaactcccggcctctgcataactaggatgcacacagccaaaacacacaaacccacaaaagagtttgtaacaagagaaggaaagcagtaaaaatcagggagcaccaatcttcaggctagaccgccacccatgtccctgggtaaaacattccctgaccacctgctccaagcgctaacacgccgctgcaaccaaatcccgtgaaccaggcttctgaaggatagcccaggtacgaaggaagtggatagttaaaaaaataacctgtaaaggagaagagatttttcttttgtcaaacaccatatcattcctgcaaagccataatgaccaacaaatagtggctgcccctaacaggataagtgacttcaagtctttcctaattccccgtagccaattaccaaacatattggatacaccacgtggcgggaaaagccctgtagccacttgtataatgcaccacacaaaacgggcaaatctgcactcataaaacaaatgtaatattgtctcatctttgtgacaaaagcaacaattcttacttccttgccaattgcgcttagctaggttatcccttgtcaaaactaccccacgacgtaaataccataggaagatcttcactttaagcggtatttttaatttccaaattactttgtttatgttgggcaaatctgaatgtaccaaggcaagataatgcgacttcactgaaaactctccattttgggttaaattccaatgaaacttatcttgatcctgagtaagaactaggttagcgattcgtggaagaaggttattccacgccactaattttggctaatgttttgtgttaaaaaaaatagtaatgtggaatcatttatctttttaacgattaactgtattggttgtctctgcacagcatggcttttggtttcctctcctcatgttactgttacataagaaattactcctaccatactggtgtttacgctgcacttggtggagactcaagctgttgtttctgtctaagcaataatgtcatttgcatatagatacatgaggtgtagcaaatctacagaatcagaggtcaggaactacacaaaaaacaatcaataatataatcacgataaattatttgatatgagtattgagaacaatacaatgaaaaaaaaaactatgatgcacagattggtataaagctagtagcctaataatttgatgcattttgctattaattagttctatacgatggatttccaacgcaaatgcatccccaatgttaaggtgagaccacaccctgttgaggcacagtagcatatagacggccgtctaagagatccaatacatgctttgcatgaatgtctagtttaggttctgtcacctctgaatctagtggatacactctttctttggcaaggcagctcatctagtggactccactgaggttgttgggcattttcagaaggtgattcatcaatcttcagactgtaataagattataagaacctcgcaagtggatgtgctgtcagctgtttctaactagtgaattttcaggttcttacctccagaggcaagttctgtatctgctcaatcgccattggtgtgattgttgaggttataatcatgttcccaatccagcaccggtcatacggagatggaatcaacaatgttcttgttcttctgagaggagggataccgatcgcaatgcctactgttctgtcagtcacacttgcaataggttctcatcacctgtctcaacaggtgtgtccaagatattgttgtcatgtttcttcaattaacagacagtatatcacatatcattactaaaattaattaatttttggcaaggtgctatcactaaaaggatgacagccatagaagaaatggcaggaatggatgttctctgctgtgacaaaattggaactctcactctcaaccatctcactgttgacaaaaacctaattgaggtagagaactttaataaaaatatgtggtatatcgaatccatcattattgagtagctaggcaacttatgttccatcctttgtgtaatttcaggtttccggtggacgccggcatgttcccggagcacaagtacgagatcgtgaggatcattcaacgggagggccacctgtgcgggatgaccggcaacggcatgaacgcgctggcgctgaagaaggccgacatcggcacagccaacatcgcacgcgctagcactgaagaaggccgacatcgcgctcacggagcccggctgagaggcacacatgctgagagcgcatgtgcaatctgtgatgagaccaaagcgtgtggattctgatgtaattcgatcggctcagacagtttgatttgcttgggtttagcttcatggcgttgtatcttcagagttcaaagtaaaattactatagctttttgcatgcaaaatgtcagaaacttatacggaacatgtcggttttcttttaatgattagagatgatatatgagtttgcacctgataattgaatatctcttgttacctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0966000, RefSeq:Os01g0966000