Os01g0966400

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0966400| Description = Leucine-rich repeat, SDS22 containing protein| Version = NM_001052037.1 GI:115442444 GeneID:4324474| Length = 3227 b...")
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Gene Name

Os01g0966400

Description

Leucine-rich repeat, SDS22 containing protein

Version

NM_001052037.1 GI:115442444 GeneID:4324474

Length

3227 bp

Definition

Oryza sativa Japonica Group Os01g0966400, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44413324..44416550

Sequence Coding Region

44413638..44414300,44414369..44414449,44414552..44414638,44414771..44414866,44414967..44415031
,44415407..44415463,44415554..44415635,44415723..44415815,44416202..44416273
,44416378..44416473

Expression

GEO Profiles:Os01g0966400

Genome Context

<gbrowseImage1> name=NC_008394:44413324..44416550 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44413324..44416550 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggctcacggtggagcaggcgaagcgcgaggcgggatccgccgggacgctcgccacgtcgctcaacctctcccaccgcgccctctccgacgtgtcgtgcctgagcagcttcgtgaatctggagcgcctcgacctcggctacaactgcctcctcactctcgagggtctatcaaactgtgccaatttgaagtggctttcggttattgaaaacaagcttgtgagcctaaaaggtgttgaaggcctctcaaagctgcaggtattgaatgctggcaagaataaacttaaaacaatggatgaggtcaaatctttgacaagcctgggagcattgattctaaatgataacaacatttcttccatctgcaaacttgaccagcttcatcagttgaacacacttgttctttccaagaatcctattttcactattggtgatgctttgatgaaggcaaaggccatgaaaaagctatccttatctcactgccagatagaaaaaattggttcttctctcactgcgtgtgtggaactgaaggaacttagacttgctcacaacaagatcactacaattccatcagacctggcaaaaaatgtcaaaattttgaaccttgatttaggaaacaacttaattgagaggagatcagatttggaggtcctttctgaattgcactacttgaggaacctaaacttgcagggaaatcctattgctgagaaagacggtctagccaagaaggttaagaaattagttcccaacctacgcatatttaactcaaagcccatggaggccagctccaagagtaagaattctagagaagagaatctaccaatcaatgatgctgatacgcctgatgatggtcctactgacatttatacaaaaaagaaaggcaaggggaaacactcaaagcaacaaattaagagccctgaagaacctgcaggacaaagtactcgcccggatgtcaccattgctgccccagccaaatctgaactgcttgatggcaaggaaatgaagaaggaaaaagcggctgtagaacatgtcaagaacaagaaatcaaagaggaaggatgacaactcttctgttgatcatactgataaaaaggttagtaagggagccaagaggacaaaatctgccaagaaggaagagaagaacgccgacggaattgatgacacagaaatgccatttgcagacttggtgttctccggtgaaggcaacaatccagagcttgagttgaagggcaaaaatcaggaaattgcccgagatggaaaatttggtggcctggtaatcgatcacaccaagaagaagaagaaagccaaaggcaccgtctttggctcgtcagctcttgagcagctatcatctgtgccggaggtaggatcaggtgcactgtcaggatgggattag</cdnaseq>

Protein Sequence

<aaseq>MARLTVEQAKREAGSAGTLATSLNLSHRALSDVSCLSSFVNLER LDLGYNCLLTLEGLSNCANLKWLSVIENKLVSLKGVEGLSKLQVLNAGKNKLKTMDEV KSLTSLGALILNDNNISSICKLDQLHQLNTLVLSKNPIFTIGDALMKAKAMKKLSLSH CQIEKIGSSLTACVELKELRLAHNKITTIPSDLAKNVKILNLDLGNNLIERRSDLEVL SELHYLRNLNLQGNPIAEKDGLAKKVKKLVPNLRIFNSKPMEASSKSKNSREENLPIN DADTPDDGPTDIYTKKKGKGKHSKQQIKSPEEPAGQSTRPDVTIAAPAKSELLDGKEM KKEKAAVEHVKNKKSKRKDDNSSVDHTDKKVSKGAKRTKSAKKEEKNADGIDDTEMPF ADLVFSGEGNNPELELKGKNQEIARDGKFGGLVIDHTKKKKKAKGTVFGSSALEQLSS VPEVGSGALSGWD</aaseq>

Gene Sequence

<dnaseqindica>2251..2913#2102..2182#1913..1999#1685..1780#1520..1584#1088..1144#916..997#736..828#278..349#78..173#gctcagctcgcctgccgccgcaacgagcgcttgcttcgcttcgccctcctcaacggcggcggccggaggaggaggagatggcgcggctcacggtggagcaggcgaagcgcgaggcgggatccgccgggacgctcgccacgtcgctcaacctctcccaccgcgccctctccgacgtcggtgctgtgtagcctctgcctcgtcgattggtgttttttttcctgccatgttttctcatccttgtgttgtgcggtgctgtgctgtgttggtttttgtgtaggtgtcgtgcctgagcagcttcgtgaatctggagcgcctcgacctcggctacaactgcctcctcactctcgaggtaactagtcaatgtactacgggttaaaacacagtattctagtgagaaatgcacatgtttatacaacaaatttagcatcggtgtagattcttggtgaatttcacctgtatggatatatgcgatgtcggtgttactgtgttctctacaagcataggcactgggtaaatccatctgaaacattgaatagttaaaaggatgaatcccgtaataaccttttagaaagtcatataatggactaatttgatgtcccattcggtctggattattctttgagttcattgaagtagagaattgatggctaatcgttccattaaatcattgctgtggctgtgttcatcagagtatcttttttttttccactcacattgtggttttgaatgctgaagggtctatcaaactgtgccaatttgaagtggctttcggttattgaaaacaagcttgtgagcctaaaaggtgttgaaggcctctcaaagctgcaggtgagttacttctctgccccgcaaaaggatcttagcctgattacttcacttgcaatgattggcagttgctcctctcctgttgtacaggtattgaatgctggcaagaataaacttaaaacaatggatgaggtcaaatctttgacaagcctgggagcattgattctaaatggtaatgctatgcacaaatgctatgttttgtcagttgtattttgtttctgctggtagcttgatgactggatctctgtaatttctcatgcagataacaacatttcttccatctgcaaacttgaccagcttcatcagttgaacacacttggtatgcatagtgagatctcaattaattatagaatgaactgagtggcttcatcctgtagaattcattttttccccttggaatgattaaatgatatggtcttgatttgtgccgataattttgataaaccaaaaggatgttaatagtttttgtaagtatagtaagtttgggaaccttaacattaagatccttgcccattgcaatttctttctgcatgtaaaataccagttttcttataaatcatccatattcagttttcatattgtagtacaaacccatcacccaacaaaagagttgttttacagtccagtttggaacaggcaaagaataatgatgttccctccacctaatttacttctgaatgtttttctgctgcagttctttccaagaatcctattttcactattggtgatgctttgatgaaggcaaaggccatgaaaaaggtttgtattatttagttttgcaaaaaaaaaagacctatcagctttaatatgcactttttcctgttttacatgactaatgttttgtcattaccttcctcagctatccttatctcactgccagatagaaaaaattggttcttctctcactgcgtgtgtggaactgaaggaacttagacttgctcacaacaagatcactgtatgtatatggacttatggatagcatatgtctgggtctcttttgcacattgttttttttttctgctcgaaagcatgttacattccacttggtcactctgtaacatcttgctgaactctgtctgattcacagacaattccatcagacctggcaaaaaatgtcaaaattttgaaccttgatttaggaaacaacttaattgagaggagatcagatttggaggtttgcatctgattaattttctcccacccttctacattcataatatctttacactgtctcagtctatcttttttctattctttttctttttttttgggttaggtcctttctgaattgcactacttgaggaacctaaacttgcagggaaatcctattgctgagaaagacggtctagccaagaaggtaataccgtttattttctgcctttctgtatgtatgcaattctggagtaactctggatgttttctcaggttaagaaattagttcccaacctacgcatatttaactcaaagcccatggaggccagctccaagagtaagaattctagagaagagaatctaccaatcaatgatgctgatacgcctgatgatggtcctactgacatttatacaaaaaagaaaggcaaggggaaacactcaaagcaacaaattaagagccctgaagaacctgcaggacaaagtactcgcccggatgtcaccattgctgccccagccaaatctgaactgcttgatggcaaggaaatgaagaaggaaaaagcggctgtagaacatgtcaagaacaagaaatcaaagaggaaggatgacaactcttctgttgatcatactgataaaaaggttagtaagggagccaagaggacaaaatctgccaagaaggaagagaagaacgccgacggaattgatgacacagaaatgccatttgcagacttggtgttctccggtgaaggcaacaatccagagcttgagttgaagggcaaaaatcaggaaattgcccgagatggaaaatttggtggcctggtaatcgatcacaccaagaagaagaagaaagccaaaggcaccgtctttggctcgtcagctcttgagcagctatcatctgtgccggaggtaggatcaggtgcactgtcaggatgggattagttgtaatgagctgcgagtctgatgactggcgattaatgcttaatggaatgttggaactccttattttggctttacttgcaagccgagcttttgtatgcaccatctgcttgttttgtcacttcaaacgtgcaaactgacctgtcggtgcagcaagtgttgaaaattttgtacaagttcaggttggaagttttgtaaaagttcagatgatggggagctcaatttccctgaactcaacagtgttgttgcttttcatccattattatccaactctgtagttaagcaaagacgcaacatttcgtactagtttttttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0966400, RefSeq:Os01g0966400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0966400&oldid=28346"