Os01g0968400

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0968400| Description = Root cap family protein| Version = NM_001052053.2 GI:297598400 GeneID:4324016| Length = 1396 bp| Definition = Oryza...")
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Gene Name

Os01g0968400

Description

Root cap family protein

Version

NM_001052053.2 GI:297598400 GeneID:4324016

Length

1396 bp

Definition

Oryza sativa Japonica Group Os01g0968400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44505542..44506937

Sequence Coding Region

44506032..44506778

Expression

GEO Profiles:Os01g0968400

Genome Context

<gbrowseImage1> name=NC_008394:44505542..44506937 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44505542..44506937 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaactctgtcatgtcagtgtgcgatctgttccccggcacgtcgtgcggcgacccacggttcaccggcgccgacggcaacaccttctacttccacggcaagaaggagcaggacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcggcaaccacaacccggccatgaagcgtgacttcacctggatccagtccctcggcatcagcttcggcgaccaccgcctctacatcggcgcgcgccgggccgccgagtgggacgacgacgaggaccacgtccagatcaccttcgacggcgagcccgtcaacgtcgacgccgccaagggcgcccactgggtctccgccgccctgccgtccctctccgtctcccgcaccgacaccgtcaacgccgtcgccgtcgagctcgacggcgtcttcgccatcaccgccaacgccgtccccatcaccgacgacgactcccggatccaccactacggcaagaccgccaaggacaccctcgtccacctcgacctcggctacaagttccacgccctctccggcgacgtcgacggcgtgctcggccagacttaccgccccacctacgccaacaggctcaacatcaccgccaagatgcccatcatgggcggcgccgacaagtaccgctcctcgggcctcttctcgccggactgcgccgtctccaggttccaccgccgccgcaccgccggagaccatgtcgccctcggttttgcctcgtaa</cdnaseq>

Protein Sequence

<aaseq>MNSVMSVCDLFPGTSCGDPRFTGADGNTFYFHGKKEQDFCIVSD ADLHINAHFIGNHNPAMKRDFTWIQSLGISFGDHRLYIGARRAAEWDDDEDHVQITFD GEPVNVDAAKGAHWVSAALPSLSVSRTDTVNAVAVELDGVFAITANAVPITDDDSRIH HYGKTAKDTLVHLDLGYKFHALSGDVDGVLGQTYRPTYANRLNITAKMPIMGGADKYR SSGLFSPDCAVSRFHRRRTAGDHVALGFAS</aaseq>

Gene Sequence

<dnaseqindica>491..1237#aactccgatccatcgatcgatcagcaactaagtagctagcagccaaacaatcatcctagctaggctgattgatccaagctagcttcgtcgtacgtgcagcgcatcagcctagctagctagcaatggcggctctggtgcaggtggtggcggtggcgcttgcgctgtggtgctgcggcgccgccgtcgtggcgtccgccgcggcgtcgagcccgccgctggtgtcgccgaaggcgaagcccggcgtgcggccgaagctcccgcccaagacgaagctgaccaccatcaccttcagcccccaccacaagcgcgactaccaggtcacctgcaccaacaccggccgccgtccctgcgtcgtctcctgcccttccaactgccccaacaagtgcctcgtcgcctgcgcctactgcctcaccttctgcagtacgcacgcacatatatatatttcgattattcatccttcgtttccaattggattaatattgatatatgtatgaactctgtcatgtcagtgtgcgatctgttccccggcacgtcgtgcggcgacccacggttcaccggcgccgacggcaacaccttctacttccacggcaagaaggagcaggacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcggcaaccacaacccggccatgaagcgtgacttcacctggatccagtccctcggcatcagcttcggcgaccaccgcctctacatcggcgcgcgccgggccgccgagtgggacgacgacgaggaccacgtccagatcaccttcgacggcgagcccgtcaacgtcgacgccgccaagggcgcccactgggtctccgccgccctgccgtccctctccgtctcccgcaccgacaccgtcaacgccgtcgccgtcgagctcgacggcgtcttcgccatcaccgccaacgccgtccccatcaccgacgacgactcccggatccaccactacggcaagaccgccaaggacaccctcgtccacctcgacctcggctacaagttccacgccctctccggcgacgtcgacggcgtgctcggccagacttaccgccccacctacgccaacaggctcaacatcaccgccaagatgcccatcatgggcggcgccgacaagtaccgctcctcgggcctcttctcgccggactgcgccgtctccaggttccaccgccgccgcaccgccggagaccatgtcgccctcggttttgcctcgtaaatcgccgatcactcgtctactccaaccaagtgagatacgatcgatcgactatgaaataaatcgacactgatcagtacgtacgtatatacatactcgtgcaccacgtcaaagcaagaaataatattctcattatgtggatggtgcattgattaattccaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0968400, RefSeq:Os01g0968400