Os01g0971400

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0971400| Description = Similar to Cysteine proteinase| Version = NM_001052068.1 GI:115442506 GeneID:4323845| Length = 1806 bp| Definition ...")
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Gene Name

Os01g0971400

Description

Similar to Cysteine proteinase

Version

NM_001052068.1 GI:115442506 GeneID:4323845

Length

1806 bp

Definition

Oryza sativa Japonica Group Os01g0971400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44650503..44652308

Sequence Coding Region

44650553..44651431,44651796..44652014

Expression

GEO Profiles:Os01g0971400

Genome Context

<gbrowseImage1> name=NC_008394:44650503..44652308 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44650503..44652308 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcttcaatgaattcgaagcttcccctggctcttgtgctcctcctgctgtgcggcggcgcatgcgtagcggtagccatgcccagtgaattgtccatagttggctactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatggccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttcaaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggcctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctcaccctcactccggcgaggaggaacagcaacgatcagttgttcaggtacgaggaggtggaggcggcaagtttgccgaaggaggtggactggaggaagaagggggcggtgacggaggtgaagaaccaggggcagtgcggcagctgctgggcgttctcgacggtggcggcggtggaggggatcaacgccatcgtgaccggcaacctgacgcgcctgtcggagcaggagctcatcgactgcgacaccgacggcaacaacggctgcagcggcggcctcatggactacgccttctcctacatcgccgccaacggcggcctccacaccgaggagtcctacccgtacctgatggaggaaggcacctgccgccgcggcagcacggagggggacgacgacggcgaggcggcggcggcggtgaccatctccgggtacgaggacgtgccgaggaacaacgagcaggccctgctcaaggccctggcccaccagcccgtcagcgtcgccatcgaggcctcaggcaggaacttccagttctacagcgggggtgtgtttgatggtccgtgcggcacgcggctggatcatggcgtgacggccgttggatacgggacggccagcaagggacacgattacatcatcgtgaagaactcgtggggatcgcattggggtgagaaggggtacatccggatgaggaggggcaccggcaagcacgacggcctctgcggcatcaacaagatggcctcctacccaaccaagaacgcttaa</cdnaseq>

Protein Sequence

<aaseq>MAASMNSKLPLALVLLLLCGGACVAVAMPSELSIVGYSEEDLAS HERLMELFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKKITGYWLGLNEFAD LTHDEFKAAYLGLTLTPARRNSNDQLFRYEEVEAASLPKEVDWRKKGAVTEVKNQGQC GSCWAFSTVAAVEGINAIVTGNLTRLSEQELIDCDTDGNNGCSGGLMDYAFSYIAANG GLHTEESYPYLMEEGTCRRGSTEGDDDGEAAAAVTISGYEDVPRNNEQALLKALAHQP VSVAIEASGRNFQFYSGGVFDGPCGTRLDHGVTAVGYGTASKGHDYIIVKNSWGSHWG EKGYIRMRRGTGKHDGLCGINKMASYPTKNA</aaseq>

Gene Sequence

<dnaseqindica>51..929#1294..1512#atgcacagcagcagcagcttgtatcatcctactagtagtagcttgcaacaatggcggcttcaatgaattcgaagcttcccctggctcttgtgctcctcctgctgtgcggcggcgcatgcgtagcggtagccatgcccagtgaattgtccatagttggctactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatggccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttcaaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggcctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctcaccctcactccggcgaggaggaacagcaacgatcagttgttcaggtacgaggaggtggaggcggcaagtttgccgaaggaggtggactggaggaagaagggggcggtgacggaggtgaagaaccaggggcagtgcggcagctgctgggcgttctcgacggtggcggcggtggaggggatcaacgccatcgtgaccggcaacctgacgcgcctgtcggagcaggagctcatcgactgcgacaccgacggcaacaacggctgcagcggcggcctcatggactacgccttctcctacatcgccgccaacggcggcctccacaccgaggagtcctacccgtacctgatggaggaaggcacctgccgccgcggcagcacggagggggacgacgacggcgaggcggcggcggcggtgaccatctccgggtacgaggacgtgccgaggaacaacgagcaggccctgctcaaggccctggcccaccagcccgtcagcgtcgccatcgaggcctcaggcaggaacttccagttctacagcggggtatgaaacaattaatcaacaatgttctctcttcaatagctaaaaaaacacaaatgctttgctatagataaaagaaaatatattatagtatgtaataaatattataaaaattatcgaacatattagtaccacttgtttatttgtttgaactgaatatttgggctattccataataacaaaagatatcagcagtcaatttttaaaaacagcagtgggtgtttgattcactgccaccatcactagagactttataggagtataggttaatggaatttaattgtagtagtaaattgtttgtaattacttcttaatttgccattttcttcttgtcctgacttgaaattaatggtgattaatcggtcagggtgtgtttgatggtccgtgcggcacgcggctggatcatggcgtgacggccgttggatacgggacggccagcaagggacacgattacatcatcgtgaagaactcgtggggatcgcattggggtgagaaggggtacatccggatgaggaggggcaccggcaagcacgacggcctctgcggcatcaacaagatggcctcctacccaaccaagaacgcttaaattaaatcagtttcttaatttcaaggatacaaaataataacacaagaagaggactctcttaattcatcctgcttgtaaagttcgttgttgttatctcggcacttccaagtgtttctcagtactcgtattcattgttattcattttcaattcccatccacatttcaagattgtttgtctctcattatttttcatcggtgaaaattaaagatggtgatggatagatgtaataattactgggattccctctttgtttctttgtaatatttattaataatcggtggctactttggggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0971400, RefSeq:Os01g0971400