Os01g0972000

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0972000| Description = Zinc finger, RING-type domain containing protein| Version = NM_001052074.1 GI:115442518 GeneID:4326393| Length = 127...")
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Gene Name

Os01g0972000

Description

Zinc finger, RING-type domain containing protein

Version

NM_001052074.1 GI:115442518 GeneID:4326393

Length

1278 bp

Definition

Oryza sativa Japonica Group Os01g0972000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44679799..44681076

Sequence Coding Region

44679851..44680855

Expression

GEO Profiles:Os01g0972000

Genome Context

<gbrowseImage1> name=NC_008394:44679799..44681076 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44679799..44681076 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgacgcctcctcctacacctactgttgccacagctgcgacagcttcgtccacccgcacccccacctcgacgccgctgtgctctgtccccactgcaacgccgccggcttccttcacgaccacgagatgcctcccgccgccgaccactccccgttcaacccccccgtcatcgtcctccgccgctccgcatcccccgacgacgccaccaccttcgatctcctctacgacgacggcgcctcctccgccctccgccccctcttcgaccgcctcctcctccgcatcccctccgcctccgacaaccccaaccccccggcctccaaagccgccgtcgactccatgcccaccatcctcatcggggcctgccacctcgccgccgactcccactgcgccgtctgcaaggaacccttccacctcgccgccgaggccagggagatgccctgcgcccacatctaccaccacaattgcatcctcccctggctcgctctccacaactcatgccccgtctgccgccaccgcatgcccaccgatgaccacgactcgaccaatgctgctgctgctcaggctgccgccggaagcagcgacgaggacgccaccaccgtgggtactctcaccatttggaggcttcccggtgggggatatgcggttgggaggtttgctgctgctggtgggacaagagccggtgagagggagctcccggttctctacacccagatggatgatggcggcttcaacggcggcggcggctcgggctcgccgacgatgatcgggtggtcatctagagggagtcgttcgtcccagagacagagaagcatcatcccacgcttgtttcgcaacatgtttgcatgctttaggcatcatgatgcaactgcagattcaggagattattcctcacgggctgggaggagatcctcctcctctgtcttcacccgcagcctgaggagccagatcacgagctggagatcggaagatggccaccccgatgccattgctactagatga</cdnaseq>

Protein Sequence

<aaseq>MDDDASSYTYCCHSCDSFVHPHPHLDAAVLCPHCNAAGFLHDHE MPPAADHSPFNPPVIVLRRSASPDDATTFDLLYDDGASSALRPLFDRLLLRIPSASDN PNPPASKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHNCILP WLALHNSCPVCRHRMPTDDHDSTNAAAAQAAAGSSDEDATTVGTLTIWRLPGGGYAVG RFAAAGGTRAGERELPVLYTQMDDGGFNGGGGSGSPTMIGWSSRGSRSSQRQRSIIPR LFRNMFACFRHHDATADSGDYSSRAGRRSSSSVFTRSLRSQITSWRSEDGHPDAIATR </aaseq>

Gene Sequence

<dnaseqindica>53..1057#acatctctcacatctctctcctccactccgctcccgtcgccgccacatcgccatggacgacgacgcctcctcctacacctactgttgccacagctgcgacagcttcgtccacccgcacccccacctcgacgccgctgtgctctgtccccactgcaacgccgccggcttccttcacgaccacgagatgcctcccgccgccgaccactccccgttcaacccccccgtcatcgtcctccgccgctccgcatcccccgacgacgccaccaccttcgatctcctctacgacgacggcgcctcctccgccctccgccccctcttcgaccgcctcctcctccgcatcccctccgcctccgacaaccccaaccccccggcctccaaagccgccgtcgactccatgcccaccatcctcatcggggcctgccacctcgccgccgactcccactgcgccgtctgcaaggaacccttccacctcgccgccgaggccagggagatgccctgcgcccacatctaccaccacaattgcatcctcccctggctcgctctccacaactcatgccccgtctgccgccaccgcatgcccaccgatgaccacgactcgaccaatgctgctgctgctcaggctgccgccggaagcagcgacgaggacgccaccaccgtgggtactctcaccatttggaggcttcccggtgggggatatgcggttgggaggtttgctgctgctggtgggacaagagccggtgagagggagctcccggttctctacacccagatggatgatggcggcttcaacggcggcggcggctcgggctcgccgacgatgatcgggtggtcatctagagggagtcgttcgtcccagagacagagaagcatcatcccacgcttgtttcgcaacatgtttgcatgctttaggcatcatgatgcaactgcagattcaggagattattcctcacgggctgggaggagatcctcctcctctgtcttcacccgcagcctgaggagccagatcacgagctggagatcggaagatggccaccccgatgccattgctactagatgataatggtggtatgatttggaaattgatcatcacctgcatctttttgctaccttttgcttgatgattttgtgtaagtagtagataatatcaagaaagatatgatgagtattattgtttgtaggcatagcaaaattgctgcttaatttgtacatatagcagattgttcaggtaacaatgtaacattacaattcaaatatcatatatctttggtttgcctattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0972000, RefSeq:Os01g0972000