Os01g0973000

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Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0973000| Description = Pyrimidine 5-nucleotidase family protein| Version = NM_001052079.1 GI:115442528 GeneID:4326398| Length = 2464 bp| D...")
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Gene Name

Os01g0973000

Description

Pyrimidine 5-nucleotidase family protein

Version

NM_001052079.1 GI:115442528 GeneID:4326398

Length

2464 bp

Definition

Oryza sativa Japonica Group Os01g0973000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44749009..44751472

Sequence Coding Region

44749497..44749557,44749937..44750002,44750088..44750185,44750308..44750345,44750417..44750504
,44750589..44750861,44750958..44751023,44751112..44751267

Expression

GEO Profiles:Os01g0973000

Genome Context

<gbrowseImage1> name=NC_008394:44749009..44751472 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44749009..44751472 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgcgagagcaactacagcaaggagcagaggctcaacggcgacagcctcgtcttcgaccttgatgacacgctgtatccggtgacctccggcattggagccgacgtcgtaaggaacatccaagcttatatgatcgaaaagcttggtgtggaagagagcatcagtttggagctatgcgtcctcctctacaagcagtatggaactaccatggccggtttgagggctgttgggtaccagtttgattatgacgacttccacagctatgttcatggaaggttggcttatgagaaaattaagcctgatccagtacttaggaacattctcctaagcttgccaatccgcaaagttgtcttcacaaatggtgacagaattcatgcttcaagggccctcaagaggctaggaatagaagattgctttgaaagagttgtgtgctttgagacactgaacccaacatcatcctctctttcggcagctggtcaggttgaaatttttgatataatgaagcatctggctcatccagagcctggggttgaactaccaaagtcgccaatcctgtgcaagccaaatatagatgccatgcggcaagctctcaaggttgcctccatcaatccgaagacatcgatattgtttgatgacagcgccaggaacatccaggctgcgaagctaataggaatgtatactgtcctggttggaacttctgaaagaataaagggtgctgaccatgcgttggaaagccttcacaacatgaaggaagcattgcctgagctgtgggatgaagctgtgaaggatgaggatgtcaggaagtcaagcaaagtcggaattgagacatctgtgatcgcttaa</cdnaseq>

Protein Sequence

<aaseq>MECESNYSKEQRLNGDSLVFDLDDTLYPVTSGIGADVVRNIQAY MIEKLGVEESISLELCVLLYKQYGTTMAGLRAVGYQFDYDDFHSYVHGRLAYEKIKPD PVLRNILLSLPIRKVVFTNGDRIHASRALKRLGIEDCFERVVCFETLNPTSSSLSAAG QVEIFDIMKHLAHPEPGVELPKSPILCKPNIDAMRQALKVASINPKTSILFDDSARNI QAAKLIGMYTVLVGTSERIKGADHALESLHNMKEALPELWDEAVKDEDVRKSSKVGIE TSVIA</aaseq>

Gene Sequence

<dnaseqindica>489..549#929..994#1080..1177#1300..1337#1409..1496#1581..1853#1950..2015#2104..2259#ccctttccttctcattcctcgcggggaggggcggcgccgacgcctcatcgactagttcactccatctccatctccatctccatctccatctacatatacggccgcttccaactgcaatctcctgcctgcccagcgattcttcccacgatttcctttcctgcttttctcatcccttttgtttcttcactccggctcaccgcgcgaaccaatcttctgccttcacacaaccaattcatcaagcaggtctgttttcccattcccttcttttcttggaccagccaaatttccttttttatttttgtgtgtatcaaggatggcggcagttcattggggatcctagtcaaatcttgtactagtccggcctgtaacgccaaagcttagatctgaatcggatatctctcttcaatcctgtgtttgtattgtttgtttgggcgtaaagtcgttactttttttttcttctgttggttggttggttgtatcagatcgagatggagtgcgagagcaactacagcaaggagcagaggctcaacggcgacagcctcgtcttcggtatgctacccattgcttaaccagtactccctccctccttaaacatttgacgccgttaacttttttaaatatgtttaaacgctcatcttatttaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatactactactcaagtttttgaataatattcacaaaattttttaaataagacaaatggtcaaacatgtttaaaaaagtcaacggcatcaaatatttagggacggagcgaatgattcaatagtaattcttgccatcactggtgctgtctccaattgcatttcagaaaaaaaaaaggaatttcatttaaagtgaaactgcaagattttcataccttgttcattttcctttttagaccttgatgacacgctgtatccggtgacctccggcattggagccgacgtcgtaaggaacatccaaggtacacaaacagtcaagcacaacgtattagcatttcttggaacagatatgttgatgaggtatgtggtgttgtttggatgtttcagcttatatgatcgaaaagcttggtgtggaagagagcatcagtttggagctatgcgtcctcctctacaagcagtatggaactaccatggccggtttgagggtctgtatgctttactctattccccagcaaagttgcccccctttttgggtgcttgttcatatcttccttgctgttctgtaaccctcttaagtattgttcctttcaatcttatgatgatgcaggctgttgggtaccagtttgattatgacgacttccacaggtattggcttctcaccaaaatacatgtttttgccagtaatcaggttcttagttgcttcattttctgtgcagctatgttcatggaaggttggcttatgagaaaattaagcctgatccagtacttaggaacattctcctaagcttgccaatccgcaaagttgtatgtacgcaaacctcaagtttattttgtacaaaacataataagcatttgattctaatgatagattttaattgttttgaccaggtcttcacaaatggtgacagaattcatgcttcaagggccctcaagaggctaggaatagaagattgctttgaaagagttgtgtgctttgagacactgaacccaacatcatcctctctttcggcagctggtcaggttgaaatttttgatataatgaagcatctggctcatccagagcctggggttgaactaccaaagtcgccaatcctgtgcaagccaaatatagatgccatgcggcaagctctcaaggttgcctccatcaatccgaagacatcggtaagcacttaatttcctgcctgctcatttttcagaatcacaggtctggtcctctttggtgtgtaaactgatcgacatgcttgaaacacctatcagatattgtttgatgacagcgccaggaacatccaggctgcgaagctaataggaatgtatactgtcctggtaattatccctttcggttaattaattttgagcgtaacgattatgtaatgtttaggtaaagtaactgatgataatgtgaatgtaccaggttggaacttctgaaagaataaagggtgctgaccatgcgttggaaagccttcacaacatgaaggaagcattgcctgagctgtgggatgaagctgtgaaggatgaggatgtcaggaagtcaagcaaagtcggaattgagacatctgtgatcgcttaaaactcccatgaatgtttctgatggagaacagcatgagatgagtggatcatttttcagagctcatctctgcactttcttatgtctgaaagtagatgtgctaatttaggggagattttactcttcttcatgtactgtgtgagtgtgtgactgcctgtaataaataaataaataaatgccatctatgaactgacaatacaattcctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0973000, RefSeq:Os01g0973000