Os01g0973200

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Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0973200| Description = Kinetochore-Ndc80 subunit Spc25 family protein| Version = NM_001052080.2 GI:297598411 GeneID:4326399| Length = 3593 ...")
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Gene Name

Os01g0973200

Description

Kinetochore-Ndc80 subunit Spc25 family protein

Version

NM_001052080.2 GI:297598411 GeneID:4326399

Length

3593 bp

Definition

Oryza sativa Japonica Group Os01g0973200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44761391..44764983

Sequence Coding Region

44761391..44761498,44762416..44762630,44763139..44763261,44763372..44763461,44763545..44763652
,44764111..44764296,44764346..44764411,44764800..44764983

Expression

GEO Profiles:Os01g0973200

Genome Context

<gbrowseImage1> name=NC_008394:44761391..44764983 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44761391..44764983 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggcggcggcggcggaggaggaggagccatcgagttgcgcaggaggatggcggcgcagtgtttggcgttcgagcggcagatcgccgacggccgcgagcgcaccaaggcagcggcctccgcattcagcgccgccctcctctccgcccgctccctctccaaccacaccatttcccagcgagaaaaatccaaccaactaaaggatcagctgcgcaaacttgaagcagattttgcacaagctctgtccagtcatggaaggtctgagacccttcaaacttcctctgcagtccaaggtagcaacaagacaaagtatgaccttactggtcaatccattacgaacgcaattgcaactaatgatcagctcagctgtttggtcactgataagagggccagtagagatgaatatgcaaatgtcatatcaagtcaacttgaagctattgaagcccttgaagctaaaactgacgcagcagggaaaaagaacctagatgaagcttttatgtggtacaaaaagtttcttggttttcaagttgttggtggtgaaggggtgaaatttgtcttcagcaaaattgacattcaaaaccctgacaatgaatattcgttttgcataaagctcaacaaagatagatacaacctacttcaatgtactccatttctgaaagattctgaagaattggtgaaggatctaaactgcagtaatgatctattcaagtttgtgagaatcatgagagagaggttccaggctgctgcaatcaacgggtttcttcctgctagctcattatgcccagacatgtcgtcatccataacagattcatcaccaccggctttatcaattgatactggacgtgaaagtaccactaccaccagccaaagtcactctcgaagtcgggcgaaaaatcaagataatcctactaaaagaggagcccgtcctagtaatttgctatctagcactcgtcgatctccacgtgttgcggatcaaatgttggacgcgctgcctacacatgacatgactggatccggcaggtcgtggggctcctctgatcttatgccgttatgcggtctgctctggggactaaagtaa</cdnaseq>

Protein Sequence

<aaseq>MEGGGGGGGGAIELRRRMAAQCLAFERQIADGRERTKAAASAFS AALLSARSLSNHTISQREKSNQLKDQLRKLEADFAQALSSHGRSETLQTSSAVQGSNK TKYDLTGQSITNAIATNDQLSCLVTDKRASRDEYANVISSQLEAIEALEAKTDAAGKK NLDEAFMWYKKFLGFQVVGGEGVKFVFSKIDIQNPDNEYSFCIKLNKDRYNLLQCTPF LKDSEELVKDLNCSNDLFKFVRIMRERFQAAAINGFLPASSLCPDMSSSITDSSPPAL SIDTGRESTTTTSQSHSRSRAKNQDNPTKRGARPSNLLSSTRRSPRVADQMLDALPTH DMTGSGRSWGSSDLMPLCGLLWGLK</aaseq>

Gene Sequence

<dnaseqindica>3486..3593#2354..2568#1723..1845#1523..1612#1332..1439#688..873#573..638#1..184#atggaaggcggcggcggcggaggaggaggagccatcgagttgcgcaggaggatggcggcgcagtgtttggcgttcgagcggcagatcgccgacggccgcgagcgcaccaaggcagcggcctccgcattcagcgccgccctcctctccgcccgctccctctccaaccacaccatttcccagcgaggtatcggcccttcttccttactggagtaggactatatcactacggatggactggatctggtttactctcgtctcatctaaaatctcacactagactatgttaggtttaggttttctgtgggatccgcgcaagcaatttctctgtcttgctttttttccatttcggagattcgactctttccaaatgtcgcatacttaatccctgcttctgcacgcataaataagccaagcgtgtggcctatggttaattgttcccttcttgcattcctgcaactaatttatcgttgactgtgcactgcgatttgtgaattgtgagtacaaattctgtttcacggtaataaaaaaaaagatggggaactgacttgggcttgtgcctttctggatgacagaaaaatccaaccaactaaaggatcagctgcgcaaacttgaagcagattttgcacaagctctgtccagtaagtacaaccttttcttcactatttagtgttttgggatattcttcaggtcatggaaggtctgagacccttcaaacttcctctgcagtccaaggtagcaacaagacaaagtatgaccttactggtcaatccattacgaacgcaattgcaactaatgatcagctcagctgtttggtcactgataagagggccagtagagatgaatatgcaaatgtcatatcaagtcaacttgaaggtaacataagtttgcggttctagtacaggaatttggagtgagatagatacctttatgacttacggttcactcaatttgtttgataggatatttaggcttcacttccgttgggcacaagtcgtttcagaatcacagcctttaatgcatcatttgtggggttttattttattaaggaactccagttttggtgcattggctcagctattgcttggtctctaagtgctttactctgcattacaaataaaaaggccagattgagaattgattggagctcttaggtccaatgtatcgtattttcagatccttttctaatgatatgggttttatcttttgctatgtatgcatttctagctgtgtctatgctaatttggttcttttgtttcaatattttccattggccatacagaaactaaaatatataggccataagcccttaatgtctcttcatttgatggcagctattgaagcccttgaagctaaaactgacgcagcagggaaaaagaacctagatgaagcttttatgtggtacaaaaagtttcttggttttcaagttgttggtggtgaaggtaatggaagttttagtgatattgccaattaaattagctcagtgttatctctgctgacaaagttacaattaccgttttgcaaggggtgaaatttgtcttcagcaaaattgacattcaaaaccctgacaatgaatattcgttttgcataaagctcaacaaagatagatacaaccgtgagttacaactgtctaatatccatgcaattatactgcctaagtcatattattatattctttggtgaaagtgttgttgttaatgatgccttcttttgtgttgataacagtacttcaatgtactccatttctgaaagattctgaagaattggtgaaggatctaaactgcagtaatgatctattcaagtttgtgagaatcatgagagagaggttccaggctgctgcaatcaacggtactccattttgcatgttttcattataaatctgcgttgagttccttttccccagaacacatgatcagtgcatgtgtttaccaagattaccgcctctctcttaaaaacactaccacaagccctactgaaattcatcctgaaaaggatatgggtaccatatctctttctagagaaatgaaccccttatccctatatccatgaggccacgataaacctcttaacttcaagaaattttgaagagttaaatgcagggagcccaacaaaatacagacttacagaggttccatacaggaagataaacaattaattctccatttcccaaagtcaaatggacacagacctgacaacaagatcgatattaatggtcattgcatgatgagaggttgtctagctttccaggtttttggagttaaaacagaatttttttcatggttccattgaaaagctgtaagatgtcactgaaccggttgtcccattttcatcttactgttgttgttgttgtctacagggtttcttcctgctagctcattatgcccagacatgtcgtcatccataacagattcatcaccaccggctttatcaattgatactggacgtgaaagtaccactaccaccagccaaagtcactctcgaagtcgggcgaaaaatcaagataatcctactaaaagaggagcccgtcctagtaatttgctatctagcactcgtcgatctccacgtgttgcggtaagtgcattgtatcatcccctcaggcataattttagctggttattgatatttacctggtgccttttttgttcacaggctgcagatgcaactaataggtactaggcacagtctaagagccacttgggttgcacgagctattgctgatatttgtgtacaatttgatgcaatatggatgtatcgcgtttcatgtagtcactgtaggaatgagattgagtttagatggctatggtggagtgatttcacgcgtgaagaagctgaacttgcaaacacaggctatattctgtgcatacgcggggagatccatctcgaactccccattattcatctttgactatgacacgttgatctctccacctgacagtgataaaactgtacagtacgtattatctccatttgtcctttgcaatagagcttatcatgtgtcaaataaaatcgttgtgtatccaatgcttttgagtagggatgtattcatttgtataggtaattctgatatgctatctactgaagaatgttcactatgttggcacaccacatgttgtatcataactctctgcagtttaacagttgatgcttgcttgcacagatttgctatgaattttataccgcgagcatatgatatggttgggggtgtgctgctgctcccggtgtttgcttgttgctttgatcccgtttgtgaagttacctgtgcaattttgtctgatcattactggtctcaagcgagcgggctcggccgaaggagaaacggagcctgctcgtcgccaagaagcagccatgaagaagagcagcgagacgggcatgtgctctcctccaactccaagctcgccaagttccttgtcgactctacccacccaaccctgcagcagcagctgcttcagcttgttggatcatcttcttgatggatgttgtcttggcaggatcaaatgttggacgcgctgcctacacatgacatgactggatccggcaggtcgtggggctcctctgatcttatgccgttatgcggtctgctctggggactaaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0973200, RefSeq:Os01g0973200