Os01g0976100

From RiceWiki
Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0976100| Description = ABC transporter, transmembrane region domain containing protein| Version = NM_001052099.1 GI:115442568 GeneID:4324305...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0976100

Description

ABC transporter, transmembrane region domain containing protein

Version

NM_001052099.1 GI:115442568 GeneID:4324305

Length

3423 bp

Definition

Oryza sativa Japonica Group Os01g0976100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44925926..44929348

Sequence Coding Region

44925926..44925951,44926053..44926273,44926354..44926664,44926745..44927004,44927324..44927524
,44927620..44927795,44927877..44927931,44928703..44929080

Expression

GEO Profiles:Os01g0976100

Genome Context

<gbrowseImage1> name=NC_008394:44925926..44929348 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44925926..44929348 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttcgcggggcctcttcggctggtccccgccgcacgtccagcctctcactcccgtctccgaggcctccgagccgccggaatccccctctccctacgccgctgacctcgccggggacgccgcgccgcctccggaggatgacgccgccgccgccctcgacgatggggacgacgagcccgatccgccccccgccgccgtccccttcaagcgcctcttcgcctgcgccgaccgcctcgactgggcgctcatgtccgccggcgcccttgccgccgccgcccacggggtggccctcgtcgtctacctccacctcttcggcaccgccatccactcgcttcatggccgccacaaccacgaccttttccaccacatcaaccagcatgctttacacttcctatatattgccattggcgttttctttgcgggatggatagaggtttcatgctggattcttactggggaaaggcagacagcagtgataagatcaaagtatgtacaagtgttgttaaatcaagacatgagtttctttgatacctatgggaacaatggtgatattgtcagtcaagtgctgagtgatgtcttactcatccagtctgcgctgagtgagaaagttgggaactacattcacaacatggctaccttttttggtggtcttatcatcggtttggtcaactgttggcaaatagctcttttgacattggctactggtccgttcattgttgctgcaggaggaatatcaaatatttttctccacaggcttgcagaaaacattcaggatgcgtatggtgaagcagcaagcgttgccgaacaggcaatcttatacattaggactttgtactcattcacaaatgagaccctcgcaaaatattcttatgctacttcacttcaagcaacactgcgctatggaatcctgataagtctggtgcaaggtcttggtcttggatttacatatggccttgccatatgttcttgtgccttacaactttgggttgggaggttccttatatctcatggaaaagctaatggtggtgaagttgtagtagccctgttttctattatcctgagtggcctgggacttaatcaagcagcaacaaacttctattcttttgaacaaggacgtatagctgcatacaggctctatgaaatgattagccgttcaacctctgttgtaaaccaggatggccgtaccttaccttcagtgcaaggcaacattgagttccgcaatgtctacttcagttatctatcccgcccagaaatccccattttaagtggtttctaccttactgtacctgctagaaagactgtcgctcttgttggcagaaatggttcagggaaaagcagcattattcctctcatggaacgtttctatgatccaactttaggtgaagtgcttttggatggagagaatataaagaacctgaagttagagtggttaagaagccagataggacttgtgacccaggaaccggctttattgagcttgagcatcagggaaaatattgcatatggaagatctgccacaactgaccagattgaggaggcagcaaagacagctcatgcacatactttcatcagttcacttgaaaaaggatatgatactcaggttggtcgggctggcctttcactgac</cdnaseq>

Protein Sequence

<aaseq>MVSRGLFGWSPPHVQPLTPVSEASEPPESPSPYAADLAGDAAPP PEDDAAAALDDGDDEPDPPPAAVPFKRLFACADRLDWALMSAGALAAAAHGVALVVYL HLFGTAIHSLHGRHNHDLFHHINQHALHFLYIAIGVFFAGWIEVSCWILTGERQTAVI RSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGL IIGLVNCWQIALLTLATGPFIVAAGGISNIFLHRLAENIQDAYGEAASVAEQAILYIR TLYSFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFL ISHGKANGGEVVVALFSIILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSVVNQ DGRTLPSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPARKTVALVGRNGSGKSSIIP LMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRSATT DQIEEAAKTAHAHTFISSLEKGYDTQVGRAGLSLT</aaseq>

Gene Sequence

<dnaseqindica>3398..3423#3076..3296#2685..2995#2345..2604#1825..2025#1554..1729#1418..1472#269..646#agtagtaggctagtgtggcgagtagtagtggtattcccctcttggtcttggtgttgggctccgatccgggtcggccggcgatcgaggtccgccaccactgaccgattcacctcgccgcccgccgcccgcccatgaagcattcttcttcttcttcttcttcttgggtcttcttctagactggactaccttgtttgactagctagctactaaggtagtgtggatgccattcaaatctgcctccgccgccgacgagtactagccgctgctcatggtttcgcggggcctcttcggctggtccccgccgcacgtccagcctctcactcccgtctccgaggcctccgagccgccggaatccccctctccctacgccgctgacctcgccggggacgccgcgccgcctccggaggatgacgccgccgccgccctcgacgatggggacgacgagcccgatccgccccccgccgccgtccccttcaagcgcctcttcgcctgcgccgaccgcctcgactgggcgctcatgtccgccggcgcccttgccgccgccgcccacggggtggccctcgtcgtctacctccacctcttcggcaccgccatccactcgcttcatggccgccacaaccacgaccttttccaccacatcaaccaggtaaggttccttcattcccctttctcatacgtactaccagatctccatttttctcatatacatgccactccactcctacatatatggtatacgtacgccccgccccaccccgcaaatcaacattccttcttacttggcgcagtaatcatgcaaatttccttggttgttacagttacaattcttctgccagctttgcattagttatctccaatttcataagcaaactacctagttagtattagactgcagatttattcttaggcttgtttggtaagctgtcattatttatttctgcctctctctgatgttgatttagataagctgctgaccttttacgatatggtattgctaccggtgtttataggcgtatggttgaagcttatatcactccatgtctgaatgtgccgctttcgctagcttttctatgacctatgcatttatgcgtgttcagctggaaccaacctttcgctccaacacactgaatgaaacaattcgctctcacgcgatgaacctttgcaaattcatttactagtaaaattactttggcagcttgctggttttctaaaccttcacaattttctaacctccacactaatatctgtgcatttctacactcatttatgcatctcttgtccatctatctaattggttacactcacttttatgtgaatatcagcatttgcttgtccttctatctctgtataatcattttttctcagaattatgtatctttgtgttttggaagttagtaactaagtgttttacccgcagcatgctttacacttcctatatattgccattggcgttttctttgcgggatggataggtaagatgaggctacatcagctttttatgcactctctgttttcttttattctaacaaattcactgtctgttatatctatagaggtttcatgctggattcttactggggaaaggcagacagcagtgataagatcaaagtatgtacaagtgttgttaaatcaagacatgagtttctttgatacctatgggaacaatggtgatattgtcagtcaagtgctgagtgatgtcttactcatccagtctgcgctgagtgagaaagtgagtaattatgagccttcatgattattcacaacaaatcgcatgcttatctgactgacaagggttattctcccattctggctttgttcttttaggttgggaactacattcacaacatggctaccttttttggtggtcttatcatcggtttggtcaactgttggcaaatagctcttttgacattggctactggtccgttcattgttgctgcaggaggaatatcaaatatttttctccacaggcttgcagaaaacattcaggatgcgtatggtgaagcagcaagcgttgccgaacaggtattcaaattctttgactttcttttatcctgtaatgactgcccacatctcatccgtgaataaccttggtttgtcctactttctcgctacaaacgactatttctaaaaagatgagagtacaacatcatcgtctaaaaggataataaatttatggtcttgaaattggtaggcctctagtgatgtgcggaatggtggatttagctaggaatatacctcttgctaaaatacaaaacacactttcctttcgcaactgcatgtagcattattattaattgctaatgaaggtatgcatccatttgaatcattctcattattgcaggcaatcttatacattaggactttgtactcattcacaaatgagaccctcgcaaaatattcttatgctacttcacttcaagcaacactgcgctatggaatcctgataagtctggtgcaaggtcttggtcttggatttacatatggccttgccatatgttcttgtgccttacaactttgggttgggaggttccttatatctcatggaaaagctaatggtggtgaagttgtagtagccctgttttctattatcctgagtggcctgtaagcatccaattttaagagattgccttacttatagttttatattgatcagcacactcatggttcccaattgtttgtaggggacttaatcaagcagcaacaaacttctattcttttgaacaaggacgtatagctgcatacaggctctatgaaatgattagccgttcaacctctgttgtaaaccaggatggccgtaccttaccttcagtgcaaggcaacattgagttccgcaatgtctacttcagttatctatcccgcccagaaatccccattttaagtggtttctaccttactgtacctgctagaaagactgtcgctcttgttggcagaaatggttcagggaaaagcagcattattcctctcatggaacgtttctatgatccaactttaggtattatgcttacaagctattctttgctattttctgtttactcaattatgaatttgaatcatctttgttatatgttgcaggtgaagtgcttttggatggagagaatataaagaacctgaagttagagtggttaagaagccagataggacttgtgacccaggaaccggctttattgagcttgagcatcagggaaaatattgcatatggaagatctgccacaactgaccagattgaggaggcagcaaagacagctcatgcacatactttcatcagttcacttgaaaaaggatatgatactcaggtgctgttcatgctttattctaacatatattgaaactgtgaaacttcttattctcttttaccggtgaacgtgcttatttagtgaacctaaatatgacataggttggtcgggctggcctttcactgac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0976100, RefSeq:Os01g0976100