Os01g0976200

From RiceWiki
Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0976200| Description = 11-S plant seed storage protein family protein| Version = NM_001052100.1 GI:115442570 GeneID:4324306| Length = 1478 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0976200

Description

11-S plant seed storage protein family protein

Version

NM_001052100.1 GI:115442570 GeneID:4324306

Length

1478 bp

Definition

Oryza sativa Japonica Group Os01g0976200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44931086..44932563

Sequence Coding Region

44931368..44932501

Expression

GEO Profiles:Os01g0976200

Genome Context

<gbrowseImage1> name=NC_008394:44931086..44932563 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44931086..44932563 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcagcgcacttcatccgattcggcggcgtcggctgaggccatggtcatggacctgagtcccaagcgtcccgccaagtcctacggcggcgaaggcggctcgtactttgattggtccccctccgagctgcccatgctccgcgccgcctccatcggcgccgccaaactctcgcttgccgccggaggcctcgccctccccttctactccgattcggctaaggtggcctacgtcctccagggcaagggcacctgcgccgttctcctccccgagaccccctccgagaagatcctacccatcaaagagggcgacgcgctcgcccttccattcggcgttgtcacctggtggcacaacctgcacgccgccaccaccgaactcgtcgtcctcttcctcggggacacatccaagggccacaccgccggccgcttcaccaacatgcagctcaccggctccaccggcatcttcaccggcttctccaccgagttcgtcgcccgcgcctgggacctcccgcaggacgccgctgcctccctcgtctccacccagcccggcgccggcatcgtgaagctcaaggatggcttcaggatgcccgagggttgcgacaaggacagggagggcatggtgctcaactgcttggaggcgccgctggacgtggacatcaagaacgggggccgcgtggtggtgctgaacacgcagaacctgccgctggtgaaggaggtggggctgggcgccgacctggtgaggatcgacggccactccatgtgctcgccggggttctcgtgcgactcggcgtaccaggtgacgtacatcgtgcggggcagcgggcgcgtgcaggtggtgggcatcgacgggacgcgcgtgctggagacccgcgccgagggtggctgcctcttcatcgtccccaggttcttcgtcgtctccaagatcgccgacgacaccggcatggagtggttctccatcatcaccactcccaaccccatcttctcccacctcgccgggaggacctccgtctggaaggccatctcccccgccgtgctccaggcctccttcaacaccaccccggagatggagaacctcttccgctccaagaggctcgactccgagatcttcttcgcccccaattcgaattcgatttga</cdnaseq>

Protein Sequence

<aaseq>MVQRTSSDSAASAEAMVMDLSPKRPAKSYGGEGGSYFDWSPSEL PMLRAASIGAAKLSLAAGGLALPFYSDSAKVAYVLQGKGTCAVLLPETPSEKILPIKE GDALALPFGVVTWWHNLHAATTELVVLFLGDTSKGHTAGRFTNMQLTGSTGIFTGFST EFVARAWDLPQDAAASLVSTQPGAGIVKLKDGFRMPEGCDKDREGMVLNCLEAPLDVD IKNGGRVVVLNTQNLPLVKEVGLGADLVRIDGHSMCSPGFSCDSAYQVTYIVRGSGRV QVVGIDGTRVLETRAEGGCLFIVPRFFVVSKIADDTGMEWFSIITTPNPIFSHLAGRT SVWKAISPAVLQASFNTTPEMENLFRSKRLDSEIFFAPNSNSI</aaseq>

Gene Sequence

<dnaseqindica>63..1196#aatcacttcaccttcttcattcagttcatccaatccacgatcacttcctagcaattaagatcatggtgcagcgcacttcatccgattcggcggcgtcggctgaggccatggtcatggacctgagtcccaagcgtcccgccaagtcctacggcggcgaaggcggctcgtactttgattggtccccctccgagctgcccatgctccgcgccgcctccatcggcgccgccaaactctcgcttgccgccggaggcctcgccctccccttctactccgattcggctaaggtggcctacgtcctccagggcaagggcacctgcgccgttctcctccccgagaccccctccgagaagatcctacccatcaaagagggcgacgcgctcgcccttccattcggcgttgtcacctggtggcacaacctgcacgccgccaccaccgaactcgtcgtcctcttcctcggggacacatccaagggccacaccgccggccgcttcaccaacatgcagctcaccggctccaccggcatcttcaccggcttctccaccgagttcgtcgcccgcgcctgggacctcccgcaggacgccgctgcctccctcgtctccacccagcccggcgccggcatcgtgaagctcaaggatggcttcaggatgcccgagggttgcgacaaggacagggagggcatggtgctcaactgcttggaggcgccgctggacgtggacatcaagaacgggggccgcgtggtggtgctgaacacgcagaacctgccgctggtgaaggaggtggggctgggcgccgacctggtgaggatcgacggccactccatgtgctcgccggggttctcgtgcgactcggcgtaccaggtgacgtacatcgtgcggggcagcgggcgcgtgcaggtggtgggcatcgacgggacgcgcgtgctggagacccgcgccgagggtggctgcctcttcatcgtccccaggttcttcgtcgtctccaagatcgccgacgacaccggcatggagtggttctccatcatcaccactcccaaccccatcttctcccacctcgccgggaggacctccgtctggaaggccatctcccccgccgtgctccaggcctccttcaacaccaccccggagatggagaacctcttccgctccaagaggctcgactccgagatcttcttcgcccccaattcgaattcgatttgatggacaatatccatcctccatctccagcacctgcccacctagcagcatcagcagattcagcttccttccttttatttagatcatgtcagtcgttagatttaattcggttctttggttgttagcatcacctacctcttttatttgataataacaataagctcgagatggagtggaatttgatagtcctatcatgcatatgtcctctttatttttttaaaactctgttttaaagtcaacagccgttcgattcgatctgccatgcatgaacgaactggttttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0976200, RefSeq:Os01g0976200