Os01g0976700

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Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0976700| Description = Similar to Protein phosphatase 2C-like protein| Version = NM_001052104.1 GI:115442578 GeneID:4324311| Length = 3420 ...")
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Gene Name

Os01g0976700

Description

Similar to Protein phosphatase 2C-like protein

Version

NM_001052104.1 GI:115442578 GeneID:4324311

Length

3420 bp

Definition

Oryza sativa Japonica Group Os01g0976700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44958309..44961728

Sequence Coding Region

44959160..44959390,44959993..44960229,44960422..44960783,44960858..44961158

Expression

GEO Profiles:Os01g0976700

Genome Context

<gbrowseImage1> name=NC_008394:44958309..44961728 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44958309..44961728 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgggcagacggtcatgcggattgtgcgcccctgcttcaagcccgaccaccagctcgccgtcggcggcaccagggatggattgctctggtacaaggacaccgggaggcacgcttgcggcgacttctctatggccctcgtgcaggcaaacaaccttctcgaggatgccagccaggtcgaagctgcccctcttcttctctcccactcctcctccaccacttttgtcggcatctacgatggccatggtggcccggagactgctcatttcatcgcacaacatttcttccccaatctaaagaaatttgctacggaacagcaaactgtttcagttgatgtcattcgcaaatcctatgctgccacggaggaagggtttctcaatcttgtaaggaagcaatggctcatcaaaccgcagcttgcctccgttggttcctgctgtttggttggcatcatcaatgaaggagttctttatgtagcaaatactggtgattcccgtgctgttctagggagacttgaaaggggtgttattaaggcggttcagctgtcagccgagcataacgcaagcattgagtctgtaagggaggaattaagacagtttcacccagacgatccacgaatcgtggtcctaaagcacaacgtttggcgtgtcaaaggccttattcaggtttccagaacgttaggcgatgcttacctaaaaagtactgaatttaaccgagagcctcttttggcgagattccggctttcagaacccttccacaaaccaattctttctccagaaccatccatagaagtacataaactgtgtacagaagaccaatttgtgatatttgcctcagatgggctatgggagcacctgaccaatcaggaggctgtggatatagttaactgtgcgccaagaaatggtattgcaagaagactaataaaagcggctctgcgagaggcagcaaaaaaaagagaaatgaggtactcagacttgaaaaagattgatcgcggggtcaggagacactttcacgatgatattactgttgtagtactattcctggactctgctctagttggcaagagattctatggtggcccattactttcactgaggggtggtgatggtgcttcaacgcttacacagaaatga</cdnaseq>

Protein Sequence

<aaseq>MVGQTVMRIVRPCFKPDHQLAVGGTRDGLLWYKDTGRHACGDFS MALVQANNLLEDASQVEAAPLLLSHSSSTTFVGIYDGHGGPETAHFIAQHFFPNLKKF ATEQQTVSVDVIRKSYAATEEGFLNLVRKQWLIKPQLASVGSCCLVGIINEGVLYVAN TGDSRAVLGRLERGVIKAVQLSAEHNASIESVREELRQFHPDDPRIVVLKHNVWRVKG LIQVSRTLGDAYLKSTEFNREPLLARFRLSEPFHKPILSPEPSIEVHKLCTEDQFVIF ASDGLWEHLTNQEAVDIVNCAPRNGIARRLIKAALREAAKKREMRYSDLKKIDRGVRR HFHDDITVVVLFLDSALVGKRFYGGPLLSLRGGDGASTLTQK</aaseq>

Gene Sequence

<dnaseqindica>2339..2569#1500..1736#946..1307#571..871#gggatagatagatactccttcctccttccccctctcttccaatcctaatcctaatcctaaagaaagaagttggagaaatctcacggcggaatcaatcccacgcgattcgtcgtcgatctggccacggcactccgcttctctcttctcctctactccagcacagcagtatgagtatgaattaggataggagggagggagggagaggaatagcatagcagcagcctgcaggcggaggaattccgcccgatttgatttggatttgggattcttctctttcgttttcgtgtgttttttttttctttgttactacccttcaattcctccctttatttggggccaagccaaagccaaagcaatcaaccccgatttcacgccgcaagattctcttccttctcatgcaccgcctcttaatttcttcttctttcttggggccagaccccaacccccaatcccttgaccaccaagctcctgcttcttgcaatcttgatcgatagtctcctccatcttcttcgtcaagcctctcctccttggatctttcttactacctaggtttcctggtgcaagtgcaacatggttgggcagacggtcatgcggattgtgcgcccctgcttcaagcccgaccaccagctcgccgtcggcggcaccagggatggattgctctggtacaaggacaccgggaggcacgcttgcggcgacttctctatggccctcgtgcaggcaaacaaccttctcgaggatgccagccaggtcgaagctgcccctcttcttctctcccactcctcctccaccacttttgtcggcatctacgatggccatggtggcccggagactgctcatttcatcgcacaacatttcttccccaatctaaagagtatgttcattcctctatttctctcaatactactactactactacaatctaaagagtatgttgcttccctgcagaatttgctacggaacagcaaactgtttcagttgatgtcattcgcaaatcctatgctgccacggaggaagggtttctcaatcttgtaaggaagcaatggctcatcaaaccgcagcttgcctccgttggttcctgctgtttggttggcatcatcaatgaaggagttctttatgtagcaaatactggtgattcccgtgctgttctagggagacttgaaaggggtgttattaaggcggttcagctgtcagccgagcataacgcaagcattgagtctgtaagggaggaattaagacagtttcacccagacgatccacgaatcgtggtcctaaagcacaacgtttggcgtgtcaaaggccttattcaggtagtatttgtttcactttgatcacttctgtatgacagattgtgcctcaaaatattattccatgtgcaccgcactccggtttattaactgagtgggtgcacaatttgtgacgtttcacaatattgctcacctttaccatataatagcgcaagtactcataccttttgccttgccaatttgtgatgtgctcaggtttccagaacgttaggcgatgcttacctaaaaagtactgaatttaaccgagagcctcttttggcgagattccggctttcagaacccttccacaaaccaattctttctccagaaccatccatagaagtacataaactgtgtacagaagaccaatttgtgatatttgcctcagatgggctatgggagcacctgaccaatcaggaggctgtggatatagttaactgtgcgccaagaaatgtaagatgatatcctaactttctctgacaataattttttttcgtggagttctgaattagtttccatgtcagtcatgtctttatcgttgaaatttaagaagaatcaacattaattgttatgtcagacgtgctgagtttatttgttagaacagcaaacatcctagggatattcaacaacatctgtgctgggtcacacataacatgatgttgcttcagatgcttcaagccatatatttagctctaatggaattaatatcttttgaatttataagttccattcgctgatcagttccttaagttcttgtttcaaaccagattaactgtgcgctttcccctgagttcactctgttttctgaattaattcattgacttatgtttatccagggtttgctttattgttgtgtcttttgatttttgttgtatctttgtagaatcgagtatagtatctcgggcaaagtgaatttgccttgctcaggtagatcttcacatgtctcatgttcatattttgcaaccgtgatccccttttctttataatcgctgcgtgctctgaatgttctgatgctaacatcttgttgctaacttttgccccccaaaaaactgtagggtattgcaagaagactaataaaagcggctctgcgagaggcagcaaaaaaaagagaaatgaggtactcagacttgaaaaagattgatcgcggggtcaggagacactttcacgatgatattactgttgtagtactattcctggactctgctctagttggcaagagattctatggtggcccattactttcactgaggggtggtgatggtgcttcaacgcttacacagaaatgatgaagatcatagaggttttctgagtgaataatccatggtatcttggctggttaaagggtggagcatattaattttgattctataatatgtacggatagacttgtacctttgcatgagctcaggaatgcaaatattgatcatattactcctatgcggttggcgaaacctgggagctgcataacttcaggtaccattgcttaatctttcagtggatgaaactcaagcaatttttttttgaaacatggcttgagatgattatatctcatatccttcctttcattttgcagcatctccctccgcctctcaagtctccgttgtactatgtgctagagagggctttggagagtttgaagctggaggtagccctgtgcaatgagagccggacttgtttgctttcagctttggactttgaatgtatgtccatcttcaccgcggcagaagaaagatccattccatctcgttcattcagtattttcgttctgcggtagtacatatatttatataacagagaacacatgcaagtgagaatcacaattttgattgcagcatcgaattgaactgccctatttgtaaagcgttcctttggcaagtctttggattttgagagcaaattagtgatcgtcatccatcagtttgtcactatgtaaagagttgcagcgatgtgagcaaaatatccaatttatagaatttgttagttacttgctctgcccatttttataggaccattttgatttcaaaaggtcgaaatttgaagattttgaccaactagttagtccatgcatattacggtgcaaaagttagtaaccttcgtcccaaaaagagtacaatgaacatggactagtattggtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0976700, RefSeq:Os01g0976700