Os10g0532000

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0532000| Description = Similar to GRAB2 protein| Version = NM_001071680.1 GI:115483103 GeneID:4349213| Length = 6444 bp| Definition = Oryz...")
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Gene Name

Os10g0532000

Description

Similar to GRAB2 protein

Version

NM_001071680.1 GI:115483103 GeneID:4349213

Length

6444 bp

Definition

Oryza sativa Japonica Group Os10g0532000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21127080..21133523

Sequence Coding Region

21131186..21131348,21131463..21131731,21132764..21133357

Expression

GEO Profiles:Os10g0532000

Genome Context

<gbrowseImage1> name=NC_008403:21127080..21133523 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21127080..21133523 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatcatggagtcatgtgtgcctcctgggtttaggttccaccccaccgacgaggagctcgtcggctactacctccggaagaaggtggcctcgcagaagatcgacctcgacgtcatccgcgacgtcgacctctaccgcatcgagccatgggatctccaagagcattgcaggatagggtacgaggagcagagcgagtggtacttcttcagctacaaggacaggaagtacccgacggggacgaggacgaacagggcgacgatgacggggttctggaaggcgacggggagggacaaggcggtgcgtgagaggagcaggctcatcgggatgaggaagacgctcgtcttctacaagggcagggcacccaacggccacaagaccgactggatcgtccacgagtaccgcctcgagtccgacgagaacgccccgcctcaggaagaaggctgggtggtgtgccgcgcgttcaagaagcgaaccatgcagccgccgcggagctccatcggagcatgggaggcgagctactcctaccacgaccccgccgtcttcgtcggcggcggggaacacttcaagcaagaggccgcggccgagctggacggcgtcgccgccgccgccggagctaacgccttcctgcggtactccacccgcctggccgagctcccgcagctggagagcccgccgctgccaagccaggggagccaggcggcctcggccgtcgtcgacggcgaggaagataacgccgattctagcaggcgccctggcggcggcggcggcgccgccgccgcggtgaccacggactggagggcgttcgacaagttcgtcgcgtcccagctcagccccgaggagcagcacacctgccgggccaccgacgacgacgacatggcagcgctgctgctcctcgacggcggcgggcaggaggacgacgccgggaggtggctgggctccgccgggttgctgagcgccgtggcggccgacgcgacgacggactgcggcctcggcaccagctgcgtgcctggcgacatcaactga</cdnaseq>

Protein Sequence

<aaseq>MVIMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDVD LYRIEPWDLQEHCRIGYEEQSEWYFFSYKDRKYPTGTRTNRATMTGFWKATGRDKAVR ERSRLIGMRKTLVFYKGRAPNGHKTDWIVHEYRLESDENAPPQEEGWVVCRAFKKRTM QPPRSSIGAWEASYSYHDPAVFVGGGEHFKQEAAAELDGVAAAAGANAFLRYSTRLAE LPQLESPPLPSQGSQAASAVVDGEEDNADSSRRPGGGGGAAAAVTTDWRAFDKFVASQ LSPEEQHTCRATDDDDMAALLLLDGGGQEDDAGRWLGSAGLLSAVAADATTDCGLGTS CVPGDIN</aaseq>

Gene Sequence

<dnaseqindica>4107..4269#4384..4652#5685..6278#aatttgcttctcatctttcttctctactcctctcaaatacaagagctcacactgctccctagcttccttcttcatcccttgaactagttgtcagctactgaccagcctgaagatagatgctagtttgtgtagagaattcgatcttctgaggtgagttgcagtgatcacaagtttgcggtttcatcgatcaattgatttggtgaatgagttgcgagttggatccacattttcatgttctctgttcttacttttttttttaaagaggctgtatgccgtttctgtctttgatctgttcggttatccgttttcatctctcaaagctatccttctttcttggtttggtagcgattgatgtgtccactctatttccatcagatctttgtcatgtctttagaatttgagtgactgatgtgagggagcacaatctccatgctacgatctaacttagcttgtagttttttcaaccgttttttaatctcttccaattaattactggttggatacatatgtgatgagaacttactaccggatttttcttgatgttcatgtgctgatacatctcaacaaataggttataatattgacaggaatcgacgggatatcttcccagttccaacgtttgatgtactactctattaggccatgctcggtttgaaagagattaaagagtattgagctattgggccatgttcggtttgaaagagattgaagagtatcgagggggaataatttcacaccacaacaggtgtgaaataaattccctccaatccctaacggaacatgttcttactgcaacaagcagtaatatgttaacaagaggaaaactggaaaattatctttagactttgttgatataaacacctttttataagtcaaatttgacattggatcaaagaggaaagtagaattagtcgctatatattggatatatagacttaattgattctatctattcctatgataaatacatggtccaaacccagaaatgatttcatctagaatttaaatcagtccaaaggacaaaggttgtatcacaagaagatgaaaatgtagagcaccccattttttgtgcaatatattttcatagaaaataccagactcccccccctccccacgggaaaaaaatgtggatatagacctaaaatgttgatattgatgatttttttttcttgaaaagaactgatattgatgattgattctggtatttcgaactagattagttttgtttgtattcctacatattatgtatcttcatattgattgtgtcactctcagcagaatgtttgtttaccagagcagaatctactacaaaatggtttgaaccattttaatttcctaaaaaaaattatgccacattaaatcaagatagaacaaaaaaaatacagaaatatgtttatataaccatatgtagctttttgttgaagtagggagctgatataatcgttatactccagagaagtaattctcatgggtcttgagtggagtgcaactgtgtatagtagatcgaaaatccaaacttttcttattttcctatagcaatggaaatgaagtactccctccgggctgataatacttgtcgttttagacaaaagtgagatcaaactttaaaatatttgattatgaatcattttaaaaatatttgtctttcaaatatggtaactatatgtatatattagtcttaaaaagtactttaataaaatcatatatttgttaatacttatatatattataatagaaaataatggtcaaagttgttatttgaatatcgtgttcttatccaaaacgacaagtattatcaacccggagggagtaggagtaaggaacgagagtaccccttttccattattattttcctaaacttttgaaagcggaatttataatgcatacagtaacacgttaaaacattaaccatcattaaaaaaaaactttaaccatcaatctcaatttaaataatttgattcaacttttgaatgtgatatcattatgttatttttcaaaaatagtttcaaaatactcacttcgttttttaatatatgaagccattgacttttgacacaatgtttaactatttattttgttaaaaaatataaatgtcatttattttgttgtaatttgttttatcattaaagaaactataatcttaagttatacctttacatatttacactaattttttaataaaatgaatgtattattaaaattttatataaaaataggtggtagtattatacccttggcatataatttttaaaattttatactagtaaataatactccctccatctatttttgatagtcatatttccaaatatgaaaattttatttttgataggcatatttcaatccaacaacctatcatcataatgactttctcggatttaatgcatgactctccattctttcacactagattggctacatgggcattgaaaatgtaaatattaatgaatcgcatgtttacgagaaatgactagtaacatgtttaaatggatgataagtagaattacttatctttggtctgtgtgctaagataaaatatgactatcaaaagtagatggagggagtaatcaatagtgtcttagtgactgcactctctattccagaaaaaaaccaacttctggctagatatcatctgaggttgcttttttctagaaacaaatcgagggagtgtaatataaatgtcgaaaatgtcacttgtttgtggctagagggattatataacttaggggattagtcaggcatgcaacaagttagttatgcatccccataaagggcacaggaccagagatgtgccatggaattcctagacaaagggacagaatggtcagaggccgtgcaaagaaccaatggttgtgcaatgccctagctgcttgctgctttatagagctagcccctcagtccccggtgcaggcagcaggcctgatcgatcacaaaaggggctctcccatctcctactgatctccatttctattcctacatgtctactgctacaacaaatgcatgctgatctctgcatggcgtattgccaatgtcattggcatatattgccttctctcagtgtattctaaaaaggatttctgttttgttgtgacgatacattggcatatcatattactgaatctctgaatccctgccttctctgtgtattgctaaccactaaagagtactccagtttgcaatgcatccatgaatctctgtcaaattcttcgtgctaaagtgcatgactgtctgtagtagaagactcaactagctaacatatacactttgttgaggaaaaaagcaagctcaagttatgacagatcctatattcagaaacaacatgtctgcatccatccatatagtatgtgttacactggtccatgtctctgtagcagctatgattcactgctgactatatagccaatatgctcctgatcacagagtcgacactatcattcacagcctgcaactttgctgcatccaggcccgccctggagctcaggctttgccgtactttgccagtagtaaaattgttcagacttcaccatacactattctactactacctccgtcccatattacttgtctttttgagtttttgtttatcaatgtttgatcattcgtcttattcaaaaaattttggaattattatttattttgtttatcatttgctttattatcaaaagtactttacatatgacttatctttttttatatttgcactaatttttcaaataaaatgaatggtcaaacgttgcaaataaaaagtcaaaaacgtcacctattatgggacggagggagtagtaactgtcctagaaaccagaaagcaagaactaaaccccagcatggcgcctgcgttaaacttttctgaaagcactgaaacccatgcacgcgcttaggcaagttcatggatggtggtttagttcacatccaaccagtagtcaagtatgcagtactgcactactgtctcctcctgcaaactgcaactgatgagaactagctagctagctttgctatatagaaaaatgcagcttcgaatgattctaccactcgatcgctagctgtgtgcatgtctgcttggagatataaagattgagttgtttgctgaattttatgcatgcaggcgtatggtgatcatggagtcatgtgtgcctcctgggtttaggttccaccccaccgacgaggagctcgtcggctactacctccggaagaaggtggcctcgcagaagatcgacctcgacgtcatccgcgacgtcgacctctaccgcatcgagccatgggatctccaaggtttaattaatcttcatacatatatacttaatttcatgcatgcatagctagatcaatcgagctagctatatatagatcgatgctgatcatgcatggattggggtgggtgagaagagcattgcaggatagggtacgaggagcagagcgagtggtacttcttcagctacaaggacaggaagtacccgacggggacgaggacgaacagggcgacgatgacggggttctggaaggcgacggggagggacaaggcggtgcgtgagaggagcaggctcatcgggatgaggaagacgctcgtcttctacaagggcagggcacccaacggccacaagaccgactggatcgtccacgagtaccgcctcgagtccgacgagaacgccccgcctcaggcaagatctccatttatctctctctcaatcaacaagatcgatctacagtttctagaaaagattaattagctagatcttggtttcttacggcatccagtagattcagtgattcacatgcagcagtttgccgcgtaataaaaaaaatgcacgctagcatgagtatatggtacagtagaacagtaatgcatgaactgatcgatgagcattggaaatcgttgtgaatcttattgccttgaggcgtgcgtagttttggcttctaacctgaaggccgaattcatcatggacgcgcgcgctcctccgatccgcatgctgctgatgatgagttcagcggcgaaccagtgatggatagccacgtcggcgggaggactggactttggcggagtgtagcggcggcggcggcggcggcgggaggacggattgatcggaagttacagagacgacggcgcctcgtggattgggcttactaggccgaatttgcttttttgtttggcccggcttatttctaagaatagcccaatagcagccttgaaggcccaattggtttagcaaactcttactctctcttctcttgacacgtttagcaaaccgcccgtcaaaactaacgcaagattcgtgacaacaaaaccacttcgaaaaacgggagttttttttcccggatttctactgatatccaactgtttaatgtataagggcatgtttgatagaacttcaacttctaaatttagctctaggagttgggtttggagtggaattgtggagctggctaaccccagctccacctctatagatcattttgtgagagagctccacccagcttcgcttctatttttgttggagctgaaactatttgcctgagctccaactccagaagagatagagctggagctggagatgtgccaaacaggccctaaatttaaatgtttttcaaacatggggtcgaatgtttttcaaacatggggtcgattttgtttcacaagtactccttactattgatcatcgagtcattcaccatgaatggtgcgtgcattgcaggaagaaggctgggtggtgtgccgcgcgttcaagaagcgaaccatgcagccgccgcggagctccatcggagcatgggaggcgagctactcctaccacgaccccgccgtcttcgtcggcggcggggaacacttcaagcaagaggccgcggccgagctggacggcgtcgccgccgccgccggagctaacgccttcctgcggtactccacccgcctggccgagctcccgcagctggagagcccgccgctgccaagccaggggagccaggcggcctcggccgtcgtcgacggcgaggaagataacgccgattctagcaggcgccctggcggcggcggcggcgccgccgccgcggtgaccacggactggagggcgttcgacaagttcgtcgcgtcccagctcagccccgaggagcagcacacctgccgggccaccgacgacgacgacatggcagcgctgctgctcctcgacggcggcgggcaggaggacgacgccgggaggtggctgggctccgccgggttgctgagcgccgtggcggccgacgcgacgacggactgcggcctcggcaccagctgcgtgcctggcgacatcaactgattcagggccaagccgatcgagctctcacttctccttagcataaagtgtgagatatctacgaattgtatggatggctatatatacgtacgcctatacatatgtagctggtcaaagcatcgtttcagtttcagtttcagttcttggaagtcaatggatgttgaccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0532000, RefSeq:Os10g0532000