BGIOSGA029233

From RiceWiki
Revision as of 09:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029233| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029233, complete gene.| tag = B1331F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029233

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029233, complete gene.

LocusTag

B1331F11.10-2

Ensembl Transcript ID

BGIOSGA029233-TA

Ensembl Protein ID

BGIOSGA029233-PA

Length

1577

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21637722..21639298

Sequence Coding Region

21639026..21639298,21638742..21638942,21638569..21638639,21638167..21638306,21637722..21638023

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21637722..21639298 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21637722..21639298 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTCGCAAGAGGAACGTTCTCAAATTCGTCAAGGACTCCAGTATTCTCAGACCTGGCTATTACATTGCCATTGATCCACGCACTAAATTGGTCATCCTTGGGATTCGTGGGACTCACACTGTTTATGACCTAGTTACCGATTTGATTGCTCTAAGCGATAAGAAGGTATCACCTAAAGGTTTCTCGACACACTTTGGAACATATGAGGCCGCCCGTTGGTACCTTCGCCATGAGTTGGGACTTATCAGAAAGTGTTTGGAAAAGCATAAGGATTACAAGTTGCGCCTGGTAGGGCACTCCCTTGGAGGTGCTTCAGCCGCGTTGCTTGCTATAATGCTAAGGAAGAAGTCAAAGGAAGAGCTTGGATTTAGTCCTGACGTTATATCAGCTGTTGGATATGGAACCCCGCCTTGTGTCTCAAGAGAAATTGCTCAAAGTTGTGCAAGCTATGTTTCAACTGTTGTACTGCAGGATGATATCATCCCTAGATTAAGTGCAGCTTCACTGGCAAGATTGCGAGCCGAAATACTCAAAACAGATTGGGTAAGTGTTTTGGAAAAAGAAGACTGGAAGCATATAGTGGACATTGTGACTAATGCTAAGCTTGTAGTTTCGTCAATTCAAGATGTGGCGCGCAAGCTTGCTGATTATGCTAAAATTGTCACAGTATCAACTAGTTCTGATGCCATCAAAGATCAAGATCGCCCCCTGAGCACCAGTGAAGTATTGTCACCGGATAGTAAAGAGGATGTATTTGTGCCAGAAGATCTGTTCCTTCCTGGGACTCTGTATTACCTCAAGAGGGACATTGAGGATATAAACGGTGTAGAAGATGAGTCGTATACACTCTGGAGAGGTGATGCCGGGGAGAATTTTCAGAGGATACTGTTATCTGGCAATCTGATATCCGATCACAAATGTGAAAGCATATATTACGCCCTGAGGGATGTGCTCAAGACTCTGCCGCCCCAGGAATCAGGATGA</cdnaseq>

Protein Sequence

<aaseq>MLRKRNVLKFVKDSSILRPGYYIAIDPRTKLVILGIRGTHTVYDLVTDLIALSDKKVSPKGFSTHFGTYEAARWYLRHELGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGYGTPPCVSREIAQSCASYVSTVVLQDDIIPRLSAASLARLRAEILKTDWVSVLEKEDWKHIVDIVTNAKLVVSSIQDVARKLADYAKIVTVSTSSDAIKDQDRPLSTSEVLSPDSKEDVFVPEDLFLPGTLYYLKRDIEDINGVEDESYTLWRGDAGENFQRILLSGNLISDHKCESIYYALRDVLKTLPPQESG</aaseq>

Gene Sequence

<dnaseqindica>1..273#357..557#660..730#993..1132#1276..1577#ATGCTTCGCAAGAGGAACGTTCTCAAATTCGTCAAGGACTCCAGTATTCTCAGACCTGGCTATTACATTGCCATTGATCCACGCACTAAATTGGTCATCCTTGGGATTCGTGGGACTCACACTGTTTATGACCTAGTTACCGATTTGATTGCTCTAAGCGATAAGAAGGTATCACCTAAAGGTTTCTCGACACACTTTGGAACATATGAGGCCGCCCGTTGGTACCTTCGCCATGAGTTGGGACTTATCAGAAAGTGTTTGGAAAAGCATAAGGTGGGAAACTGACTGTCTTCAAATTTGCTCCGCATCTTTTCTTGGGTGATATATATGCCTGAGTTTTACCCTTTTCAAAGCAGGATTACAAGTTGCGCCTGGTAGGGCACTCCCTTGGAGGTGCTTCAGCCGCGTTGCTTGCTATAATGCTAAGGAAGAAGTCAAAGGAAGAGCTTGGATTTAGTCCTGACGTTATATCAGCTGTTGGATATGGAACCCCGCCTTGTGTCTCAAGAGAAATTGCTCAAAGTTGTGCAAGCTATGTTTCAACTGTTGTACTGCAGGTTATGCTTGACCCTTTCTCGGAGTGACATCCTATTTATGATATCTTTGCTGCATACTAGAATTTTTAAGTGAGCTGACATTTTCTGCCCTTTTTTTTCTAGGATGATATCATCCCTAGATTAAGTGCAGCTTCACTGGCAAGATTGCGAGCCGAAATACTCAAAACAGATTGGTAAGCAATGGCTTTTGTTGAGGTAGCATTTATAGAAAGAAGCTTGTGATTGTTCTCCTTATTGGGATAATTTGACTTCTTGTTGAACAATTCTTTTTACCCACTCTGAATGGCTTAATCCTGACATGTAACATAGCTTTCAGCCGCACATTTGTGACTTGCACTCGTAGTTGTGAAACATGAGCAACATCATGACACAGTGATAATAAAACACTAAATGGGGAACTATGTATACAATTGTTTAAATCATGTTCTTTTGTAGGGTAAGTGTTTTGGAAAAAGAAGACTGGAAGCATATAGTGGACATTGTGACTAATGCTAAGCTTGTAGTTTCGTCAATTCAAGATGTGGCGCGCAAGCTTGCTGATTATGCTAAAATTGTCACAGTATCAACTAGTTCTGGTAAGCCCCTTGCCTTTTTAATAATTTTGCAAGTTACTATTATTTATTTATTTCAATCGTCAGTTTCTGCAAAAGTGGAAAATTGAGAGGGTTTGGGGGTTTAGTATTGTATTGAATCGCATTGGTCTTTCTTGTGTTGTTAGATGCCATCAAAGATCAAGATCGCCCCCTGAGCACCAGTGAAGTATTGTCACCGGATAGTAAAGAGGATGTATTTGTGCCAGAAGATCTGTTCCTTCCTGGGACTCTGTATTACCTCAAGAGGGACATTGAGGATATAAACGGTGTAGAAGATGAGTCGTATACACTCTGGAGAGGTGATGCCGGGGAGAATTTTCAGAGGATACTGTTATCTGGCAATCTGATATCCGATCACAAATGTGAAAGCATATATTACGCCCTGAGGGATGTGCTCAAGACTCTGCCGCCCCAGGAATCAGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029233