BGIOSGA029236

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Revision as of 09:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029236| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029236, complete gene.| tag = B1331F1...")
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Gene Name

BGIOSGA029236

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029236, complete gene.

LocusTag

B1331F11.2

Ensembl Transcript ID

BGIOSGA029236-TA

Ensembl Protein ID

BGIOSGA029236-PA

Length

4182

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21619502..21623683

Sequence Coding Region

21623524..21623683,21623199..21623435,21622732..21622837,21620974..21621271,21619502..21620083

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21619502..21623683 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21619502..21623683 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATTCCGAATCCCAGCGACGAGGTGGTGCAAGTCCGGCACGGCGATGTCGCCGGCGAGCCAACCGTGGTGACCATTAGCTGCCCCGACAAGACGGGCCTCGGCTGCGACCTCTGCCGCCTTGTCCTCCTCTTCGGCCTCAACATCGTCAAGGGAGACATGAGCACTGATGGGAGGTGGTGCTACATCGTGCTGTGGGTGGTTGCAAGGCCCGGCCGCGCCATGGCAATGAGATGGGACCTCCTCAAGGACAGGTTGATCCAGCTCTGCCCTGTCGCCGCGCCATTCGGCCTCGACAACCACCACCTCGCCGCCGCTGGTCTCCACCTCCACGACCACGATGCACCTGCCCCCTCTCCCAACATCTTCTTGCTCAAATTCTTCTGCTACGACCACGTGACACGAGTGCTGTGCGAACTGGAACTCACAATTCGTAGAGTGAAGGTCTCCACCACACCTGATGGGAGAGTGCTGGATCTTTTCTTCATCACAGATGCTAGTGGGTGCCTGTCCACTGGCAGGAGGAGCTGTCGCTGGAGGCTAGAGCAGCAGACGGACGACGACCCCCAAGAGCTGCTTCACGGTCCTCGTGCGGTGCTACTGTTGGGATGCCCGAGGCAAGGGGCCAACGGGCTGAACGGCAACACCAGCGATGGGGTGAACAGATGGACGTGTCAGCAGGCAGACGGATGGACGGACAAACTTAGACAGACGACGCGCTCGAACCGAAAGGAAGTGGCACGGAATGAAGAAATTCGCAGTCCTGATGGTAAAATTGAAAGGCTTATAGATCAAATGAACCCAAATAAGCCACGTAGGTACATGGCTCCGAAGCAGAAGGAGGCGGCGAACAAGAAGAAGAAGGAGGTGGCAGTGTTGGTGAAGACCAAGACCAAGGTGGTGCAGCTCACCACCACCACCGCGGAGCTGGAGCTGGTGGACGGCAACAAGACGGGTGCAGCTGCAGATGAGACGCCGCCGGTGGTGCCGCTGCAGAGCCAAGAGACGCAGGACCCCAACGAGCCCAAGGCGGCGGCAGCGAAGAAGAAGAAGCGCGCGGGGCATGGAAGAAAAAGGAGTAGGAGGAGGAGAGGCGGTGCATTGGAGTATGGCGGGTACAAGAGGTACGTGTGGCGCGTGCTGAAGCAGGTGCACCCTGACTTGGGCGCCTCCGCCCAAACCATGGACGTCCTCGACATGATGATGGCCGACATGTTCGAGCGCCTCGCCGACGAGGCCTCTCGCCTCTCCAAGCTCTCCGGCCGCCTCACCCTCACCTCCCGTGAGGTTCAGTCCGCCGTCCGCCTCGTCCTCCCCGCCGACCTCGCCAACCACGCCATCTCCGAGGGCACCAAGGCCATCTCCAACTACCTTTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MGIPNPSDEVVQVRHGDVAGEPTVVTISCPDKTGLGCDLCRLVLLFGLNIVKGDMSTDGRWCYIVLWVVARPGRAMAMRWDLLKDRLIQLCPVAAPFGLDNHHLAAAGLHLHDHDAPAPSPNIFLLKFFCYDHVTRVLCELELTIRRVKVSTTPDGRVLDLFFITDASGCLSTGRRSCRWRLEQQTDDDPQELLHGPRAVLLLGCPRQGANGLNGNTSDGVNRWTCQQADGWTDKLRQTTRSNRKEVARNEEIRSPDGKIERLIDQMNPNKPRRYMAPKQKEAANKKKKEVAVLVKTKTKVVQLTTTTAELELVDGNKTGAAADETPPVVPLQSQETQDPNEPKAAAAKKKKRAGHGRKRSRRRRGGALEYGGYKRYVWRVLKQVHPDLGASAQTMDVLDMMMADMFERLADEASRLSKLSGRLTLTSREVQSAVRLVLPADLANHAISEGTKAISNYLS</aaseq>

Gene Sequence

<dnaseqindica>1..160#249..485#847..952#2413..2710#3601..4182#ATGGGGATTCCGAATCCCAGCGACGAGGTGGTGCAAGTCCGGCACGGCGATGTCGCCGGCGAGCCAACCGTGGTGACCATTAGCTGCCCCGACAAGACGGGCCTCGGCTGCGACCTCTGCCGCCTTGTCCTCCTCTTCGGCCTCAACATCGTCAAGGGAGGTAAAATATATAACATTCCTCTAGTATTCCCTCTTCTTTCCTCATTATAGCAGTCCAAGAGAAGAGATTGGATTGGATTGGATTGTAGACATGAGCACTGATGGGAGGTGGTGCTACATCGTGCTGTGGGTGGTTGCAAGGCCCGGCCGCGCCATGGCAATGAGATGGGACCTCCTCAAGGACAGGTTGATCCAGCTCTGCCCTGTCGCCGCGCCATTCGGCCTCGACAACCACCACCTCGCCGCCGCTGGTCTCCACCTCCACGACCACGATGCACCTGCCCCCTCTCCCAACATCTTCTTGCTCAAATTCTTCTGCTACGACCGTATGGGCCTCTTGCATGGTGGAGTACTCACTACCTTTTCTTTTCTTTTCATTTCTTTGCCCCATGGGTTTCCTTTTACTTTTTTGAGCCCTAATCTCACCACACAATGATGAATGAAATTACCAAGTTAGCAACCAATTCATATGCCCCAATCTCTTTGCAACAAACTGATTTACTAGTTTAGCCATAAACCTTTTCTTCAGCTTCATTTCTTCAAAATGTTGCTTCAATTCCTCACAAGACTTAGGAGCTCAGGATTACTAGCGAGCTAAGCCCTAAAAAAAATATTTAAGTGCTTCCAGTGAAGATATTTTACTAGAAAAAGGCCTAATTTGGAGCTGCTTGCTTCTGTGCTTTGCAGACGTGACACGAGTGCTGTGCGAACTGGAACTCACAATTCGTAGAGTGAAGGTCTCCACCACACCTGATGGGAGAGTGCTGGATCTTTTCTTCATCACAGATGCTAGGTCCACTTCTTATCTCCCCACACATCCTTTTCACTACTCCCATCCAGATTCTTTTGCTATAATTCCCAGAACAAAATATTATCTTTTCACAAATATCCCGCCATACTTTCTCTTAACCCTTGCAAAGTTGCTTATTGTTTGGTTCTGCCCCTCTACTGAAACTTACATGGTTGCTGATTATACACTTCTTCCTGAGGGATGTGCTATTCATTCTTCTAGGTAGGTAGTTATAGAGGAGTATCATTGCAATAGTATATACAACAGTATCTTGTTCATGTAGCAACTAGCTGTCATGTAACTAGGCCGGATTGGTATGCATATTGAGCTCAGGGCTGGCTAGGCCCAATCCGGCGACAAGCCGACCACTCCAGCCACTACAAAAGGAGCAGAGCCAACAAATGGGGAGGGAACATAACAGAACAAATGAAACTTGACTTCTTCCTTCCGATGCTCTCTCTTCTTCAACCTCTGTATCTCTCTTCTCTTCTCCAATCTCTAGCTATGTCTTCTTCTCCAACCTACTGCTGATTCTCAGTCTTGATTCCTTTTCCCCCATTTGTATCCCCAAATACTCATGTATCAAGTGTTGGAGGAAGAATTGTTTGCTTGTGCAGGAATTCACTAAATCACATGGAGTGGGTTCGTAACACTAGCCTGACAGGGTGAATACATCCATTCTTCCTTTTTTCAGATAAATCTGGTTGACTAGGTAGGTAGGTGAGAAATTCAGTATTTTCCATCCAATTCACTGGCCCGTAAGCCTTTCAAATTTTGCCATCAGGACTGCGAATTTCTTCATTCCGTGCTACTTCCCTCAGTTTGAGTGTGTCATCCGTCTGTGTTCGCCTGTCAGCTGGCACTGCCACTCTTGCTAGGTGTAGCCGACACCTGCCATTGCCGCTCAGCCGGAAAACATTTTCCCCTCCACAAGAGACCAAATCTATGCAATCAGATCATCGAGAACCAGATCGCCATGGCTGAAAGGCTCAGAATCAACTCTGGAAGAGTTTATACTACGATTACCAAAGAAAAGCACAAAATTGAGAGCATGCTAGAACAAACAAGCACAAGAGAATGTACGGGACAGTGGCGTCCATCGGCGGGCAGGGAGCAGGAAACAAACTCCATCCCACCGAATTTCGCTTGACTTTCGCTTGACTTTGCCGCTGTTTTTCTGATCTAAAAGAATCCAAAGAAAAGGAGAAGGGGATCCTTGTTGGGAGCAGAGCCATCGCCATTGCCATGGCGCTGAACCGATTCACCCAATGGCTGAGGCCAGTGAGCATGGTGCATGTGGCGACGATGGACGAGCTCTCGAGTACCCTAGGAGCCAGCGCTGGCGAGCGCAGCTGTGGAACACCGGGAACAGCCACTGCCACCATGGAAGCAGTCGTGCGGAGCCCACAGCAGAACGGCTGAGGAAGGGCATTCAATATAGTTACCGTGCCATCTGACGGCAGTGGGTGCCTGTCCACTGGCAGGAGGAGCTGTCGCTGGAGGCTAGAGCAGCAGACGGACGACGACCCCCAAGAGCTGCTTCACGGTCCTCGTGCGGTGCTACTGTTGGGATGCCCGAGGCAAGGGGCCAACGGGCTGAACGGCAACACCAGCGATGGGGTGAACAGATGGACGTGTCAGCAGGCAGACGGATGGACGGACAAACTTAGACAGACGACGCGCTCGAACCGAAAGGAAGTGGCACGGAATGAAGAAATTCGCAGTCCTGATGGTAAAATTGAAAGGCTTATAGATCAAATGGTAATTTCTTAAAGGCGGCAAATTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTGAGGGAGATCATTCTTCATTGCGGAGCAAGATTGTTGATGGAGTCACCAACATGCTCATGGGCTGGGACGACACTCCTCCATCCTAATCCTACTAGTAGTAGTTCTAGTTAGTTTTTTTTATGGAACACACGTCCTTTGCCTTGTACATAGTTGGTAGTGGCTGCTGTAAATTGTGTGCCTTGTTAAGTCGTTCGTGGTAGAATGCGTTGGCAGTAGCTAGCTTTGACTAATCAATCAGCAGCTAATTTCAGTCTGTTTAGTTAGGGAGCACTCCCCTCTAGTTGTATCACTATCAAAACTGAATAGTGCTCAAGTTATCTAACAGGAGGAAATGCTTACTCCTAATTACTAAAGTGGTAGTAAGCAAGCCAGTGAACCAATTGAATGCATTCATTCAATAGCCTTGTTGGCAAATGAATCTGGAGTAAATCTCAAGGTTAAGGCCAATATTCAATGGAGCTTTGGTTTTGAGTAGAGAGTTGACTGGTCGTATAGCTGAGGGCCAACATGCACGACACTGGTCTCTTGTCCAAACACTTGACATATGGCGCATTGGAATGATCGGGACGGGACGGGAGTACTCCACTCCACTGGCAAGTCCAAGGCAGGGCAGCTGGTGTAGTAGAGAGAGGGGTGGAATCGTGCAGAAGTTACCACGTCATTCCTGGGCGGCTGCCGCGTGTTCACCCGTATGTGACGTGCCGCGCCCCCGCGTCGCCATGGACATGGAAATGGTTTGCAGCTTCAACCCATAAATGAAAGGAAAGGAGAGGAGCTTTGGTAAATAATCCACTGACTTGAAGCAGAACCCAAATAAGCCACGTAGGTACATGGCTCCGAAGCAGAAGGAGGCGGCGAACAAGAAGAAGAAGGAGGTGGCAGTGTTGGTGAAGACCAAGACCAAGGTGGTGCAGCTCACCACCACCACCGCGGAGCTGGAGCTGGTGGACGGCAACAAGACGGGTGCAGCTGCAGATGAGACGCCGCCGGTGGTGCCGCTGCAGAGCCAAGAGACGCAGGACCCCAACGAGCCCAAGGCGGCGGCAGCGAAGAAGAAGAAGCGCGCGGGGCATGGAAGAAAAAGGAGTAGGAGGAGGAGAGGCGGTGCATTGGAGTATGGCGGGTACAAGAGGTACGTGTGGCGCGTGCTGAAGCAGGTGCACCCTGACTTGGGCGCCTCCGCCCAAACCATGGACGTCCTCGACATGATGATGGCCGACATGTTCGAGCGCCTCGCCGACGAGGCCTCTCGCCTCTCCAAGCTCTCCGGCCGCCTCACCCTCACCTCCCGTGAGGTTCAGTCCGCCGTCCGCCTCGTCCTCCCCGCCGACCTCGCCAACCACGCCATCTCCGAGGGCACCAAGGCCATCTCCAACTACCTTTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029236