BGIOSGA029254

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Revision as of 09:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029254| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029254, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA029254

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029254, complete gene.

LocusTag

OSJNBA0070E11.7

Ensembl Transcript ID

BGIOSGA029254-TA

Ensembl Protein ID

BGIOSGA029254-PA

Length

4719

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21338286..21343004

Sequence Coding Region

21342993..21343004,21340456..21341454,21340289..21340365,21339732..21339843,21339499..21339615
,21338286..21338633

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21338286..21343004 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21338286..21343004 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTTATGTGGCGCAGCGCCTGCACGACCTGGCCGCCGAGCTGGAGGAGGAGCGCCGCCTCCGCCGCAAGGCCGAGGAATCCCTCGCCGAGGCCGAGAAGCGCTCCGAACGCGTCAAGGCCTTAGCGCAGAACGTCCTCCGCAAGCACGACGACCTCAAGACCGAGGCCTCCACCGCCTCCTCCATGCTCACTTCCGGCTTCGAGAGGATCTCCGCCAAGGCCTCCCCCTCCGCCGCCGCCTCGCCCGCGCCGCTCCCCACCTCCCAAAAGTACTCCTCCGGCCTCCCCGCCATCGCCTACGGCGTCCTCAAGCGCGCCAACGACATCGTCGATGACCTCCTCTCCCAGATCGACGCCGCCAACCGCGACCGCGACAGGGCGCGCGAGCAGATGGAGCACCGCAACTACCAGATCGCCATCGAGGTCTCCGAGCTCGAGGCGTCCCTCGCGTCCAGGTCCGCCCACTGCGACTCCCTCTCCAAGTCCCTCTCCGACAAGGACGCCGAGATCTCGGACCTCCGGAACAACCTCGCCTTCCTGGAGACCAAGCTGGACGCGCAGAGGCCCGTGCTCGCCGACCAGATCGCCTGCGCCTCCAAGGTGTACGACGAGATACGTGAGGTGGTCAAGCTAGTGGACGCGGATGCCGCGAGCGCGCTCTCTGACTCGGTGTTCGTCTGGAAGGAGACCGACGTGGAGGAGAGCCTCAAGGTGTCCCTGGAAGGGACCAAGATGGCGTACGATCTCGCTACCACTGCCCTGCACAAGGTTGGGGCATGGGTTGACAAAAAGGAAAGCAAAGTGAGGGATTTGGAAGCGAGGGTGGATGAGCTATTGCGGGAGAAAGAGCACATTGGGGTGTTGCTCCGCAGCGCGCTGCAATCAAACACCAGCGAGGTGCTCAAGGTTGCCGAGGATGGACTAAGGGAGGCCGGAATTGAGGTTGGGCTCAAAGAGCGCAGGGAGCACAGGCCAGGGAGCATGGAGAAGGATGAAGTCTATACCCTAGCAGGGGAATTGGAGAATAGCATGAAGGAGTCCCAAGTTAAGATTGTTGAGCTGCAACATCTTGTTGAAGCACTAAGGGCGGAGTCTGGTCTACTTCGGACAAGACTGGAAGGGCAAGAAAAAGAGATTGCCCAGCTACGGAAGCAAATAAAGCATCTTGAAGAGAAGGAAAGGGTGGCAAATGAAAGTGTTGAGGGTCTGATGATGGATGTAACAGCTGCTGAAGAGGAGATCAAAAGATGGAAGATGGCAGCAGAGGAAGAAGCTGAAGCTGGTAAAGCAATTGAGCAAGAGTTTGAAACTCAGCTATCTTCCCTAAACAAGGAATTAGACGAAGCTAAACAGGCAATGCTGGAGCTAGAGAACAAACTGAAGTTCAAGGAAGAGACAGCGGCTGCAGCAATGGCGGCACGTGATGCCGCAGAGAAATCATTGAAACTAGCGGATATGAGATCAACCAGGCTGCGAGAGAGACTGGAAGAGATCAATAGGCAGCTCGAAGAATCAGACAACAGAAGGGACTCGAGCAATCGCAACGGGCATAGGTATATGTGCTGGCCATGGCAATGGTTGGGGCTGAACTATGTGCGATTGCCACCGACAGAGGCAGATCAAACCTCCAACGAGATGGAGCTATCTGAACCTCTGATATAG</cdnaseq>

Protein Sequence

<aaseq>MVYVAQRLHDLAAELEEERRLRRKAEESLAEAEKRSERVKALAQNVLRKHDDLKTEASTASSMLTSGFERISAKASPSAAASPAPLPTSQKYSSGLPAIAYGVLKRANDIVDDLLSQIDAANRDRDRAREQMEHRNYQIAIEVSELEASLASRSAHCDSLSKSLSDKDAEISDLRNNLAFLETKLDAQRPVLADQIACASKVYDEIREVVKLVDADAASALSDSVFVWKETDVEESLKVSLEGTKMAYDLATTALHKVGAWVDKKESKVRDLEARVDELLREKEHIGVLLRSALQSNTSEVLKVAEDGLREAGIEVGLKERREHRPGSMEKDEVYTLAGELENSMKESQVKIVELQHLVEALRAESGLLRTRLEGQEKEIAQLRKQIKHLEEKERVANESVEGLMMDVTAAEEEIKRWKMAAEEEAEAGKAIEQEFETQLSSLNKELDEAKQAMLELENKLKFKEETAAAAMAARDAAEKSLKLADMRSTRLRERLEEINRQLEESDNRRDSSNRNGHRYMCWPWQWLGLNYVRLPPTEADQTSNEMELSEPLI</aaseq>

Gene Sequence

<dnaseqindica>1..12#1551..2549#2640..2716#3162..3273#3390..3506#4372..4719#ATGGTTTATGTGGTGTGCACTATTTGTGTTGGGTTTCTCAAAAGAATGTAATATGTGCTATAAGACACAAGACTATATGTTTATTTTACCATTTCTCTAGATTTTACTATTAATTTTCCTTCAATACATAATACCATATAATAAAAATTCAAAGGCATACTCTTAAATTTGGGGGTTTTCTTGGGAGTTCATGGGACTTTTGTTATTCCTATGAATAACACTTGGATGGTAACAATTTGGCAACATCGATAAAAAGTTTCTCATGGCAAACTTTCCCTTGAAAAAAAAGATTATCATCAAACAAAACACTAACGACCACTTACACTCGATCGATTTGGTTGAGACATGATTTTTAGCATGACCAATGTTGTAAGAGCGTTCGATATCCTTTATGTGGGATGGCTACTATAGGACAGCCCTTTAAAGTCCTCAATGGGTGGAAATGGCTAAATGACCAGTGATATCATAGCCGATAGAAATTGAAACTATCCAAGTTGATGGAGATTTCACGTAAGATATAGTTTGCCATGTTACGTTGTTTTGTGGGTAGGGATTCAGATGCTTTGTGCGACCATGTTCTATATACAATATATGTATTAGACACATCAAGTCCGAGTAGTATCAAACCATCTTATATCAAGAGTATAATTGGATACACTGTTATTTTTGTCATGGAGTTTGTGAAGCTAGATAAGAAAAAAAAATATAACCTATTTACCGTACAATTGAAAAAAAACAAGTATCAACATAATGAATAAATATACAATTAGATTAGTTGTTTCTCTACTCAAATATATTCTCTTTGTCAATAGAAACATACAGTATTCATATGAGTATACGACATATCGATGGTGCATAAATTGAACCCATTTGAATCGTAGACGCAAAAGGATAAGTTTTAGTGAATTGGCCATTAAAGGCTTTGAACAACATTTTTAATTGGAGATAGAGCAGATAGTGAGTTGTTAACCCACCCGATCCGCGTTATACCCAAGTGAAGTAACCCACCGTTGAAGACTCGAGGGTGGCCTTTGTTGAGCCGTGTCGCCGTCGCAATCGTATAAGCCCAAACTCTAACGGCCTATTTGGTTGGAGGGAGTTTTTAGGAGAGATTGGGACTTGGGAATTTAGAAGGATGAGGCTATTAACTGTTTTGTTTGGTTGGGACACATGTGAATTTTGGTAGGATGGGGATGGGGAATTGAGAAAGGAACTCCCTCCTTTTCAATACCTAGGTAGGAGGAGGTAATTGGGAGGTAATTTCTCCTTTAATTTGTGTAAACAAATCTCAGCCATCCGTTTTTATTAATGACCTAATCTCTGACTAAACTAAAAATCAAATTCCCATATTAATTTCACCATCAATTCCCTCGTGTAAACTCTCAATCCCCTTCTCTCGAGTTACCAAACAAGCCATAACCCTATTATCTTTTGTAATACAGACACGTGGTATTGATGTACGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCTTCACAACCCCAACCCCAACCCCATGCGCAGGCGCAGCGCCTGCACGACCTGGCCGCCGAGCTGGAGGAGGAGCGCCGCCTCCGCCGCAAGGCCGAGGAATCCCTCGCCGAGGCCGAGAAGCGCTCCGAACGCGTCAAGGCCTTAGCGCAGAACGTCCTCCGCAAGCACGACGACCTCAAGACCGAGGCCTCCACCGCCTCCTCCATGCTCACTTCCGGCTTCGAGAGGATCTCCGCCAAGGCCTCCCCCTCCGCCGCCGCCTCGCCCGCGCCGCTCCCCACCTCCCAAAAGTACTCCTCCGGCCTCCCCGCCATCGCCTACGGCGTCCTCAAGCGCGCCAACGACATCGTCGATGACCTCCTCTCCCAGATCGACGCCGCCAACCGCGACCGCGACAGGGCGCGCGAGCAGATGGAGCACCGCAACTACCAGATCGCCATCGAGGTCTCCGAGCTCGAGGCGTCCCTCGCGTCCAGGTCCGCCCACTGCGACTCCCTCTCCAAGTCCCTCTCCGACAAGGACGCCGAGATCTCGGACCTCCGGAACAACCTCGCCTTCCTGGAGACCAAGCTGGACGCGCAGAGGCCCGTGCTCGCCGACCAGATCGCCTGCGCCTCCAAGGTGTACGACGAGATACGTGAGGTGGTCAAGCTAGTGGACGCGGATGCCGCGAGCGCGCTCTCTGACTCGGTGTTCGTCTGGAAGGAGACCGACGTGGAGGAGAGCCTCAAGGTGTCCCTGGAAGGGACCAAGATGGCGTACGATCTCGCTACCACTGCCCTGCACAAGGTTGGGGCATGGGTTGACAAAAAGGAAAGCAAAGTGAGGGATTTGGAAGCGAGGGTGGATGAGCTATTGCGGGAGAAAGAGCACATTGGGGTGTTGCTCCGCAGCGCGCTGCAATCAAACACCAGCGAGGTGCTCAAGGTTGCCGAGGATGGACTAAGGGAGGCCGGAATTGAGGTTGGGCTCAAAGAGCGCAGGGAGCACAGGCCAGGGAGCATGGAGAAGGATGAAGTCTATACCCTAGTAAGATCTTTGTAATGCTATAATGTTGCAGGTTCATGGACCACTTAATACGGTACAACTAAATTATCTATCATGCACTCAATGCTGCAGGCAGGGGAATTGGAGAATAGCATGAAGGAGTCCCAAGTTAAGATTGTTGAGCTGCAACATCTTGTTGAAGCACTAAGGTAGCTATCTCCACTGACGAATTTTTGTTCTGTTTACTCCCAGTGTACCATAAGTTTAGTTTGAAGGGTAGCAGGAAACTCACTAGAACTGTGTGTTTCCTTTATTGTGTTGTCACTTTCGCTGCCTGTTGAACTACATGGCAACAAACAATTTTAAAAGACCAAGACACACTTGCTGTCAATTAGACATGTGGTCTGAAGCATTTGTCTTTTGAAGTTCTGTGTAAGAAACAATAATATCTACGATTTACAATGAAACATTGGGAAATGCAACACTCTTGACATCTCGATATGGACAACTGAGCTGCAATGTGCTAAATGCTATCACTTATCACCTAGTGCATTTTTCTTCTTCAAAATATCCTGATTTTGTTCCAGCCCGTGCACTGATTCTATATAATTATTTTTTAAACTTATCCTAATTGTGTGCTTTGCTTGTTTCAAGGGCGGAGTCTGGTCTACTTCGGACAAGACTGGAAGGGCAAGAAAAAGAGATTGCCCAGCTACGGAAGCAAATAAAGCATCTTGAAGAGAAGGAAAGGGTGGCAAATGAAAGTGTAATTTTCTACTACTGATTTTTTTAGGTTTAATAGTTATCACACCTTTCTTTTCCGAGTTATTTTACACTGATGCTTGTATGTCAACGACTAAACGTGTTATGTACACTCTTAAGGTTGAGGGTCTGATGATGGATGTAACAGCTGCTGAAGAGGAGATCAAAAGATGGAAGATGGCAGCAGAGGAAGAAGCTGAAGCTGGTAAAGCAATTGAGCAAGAGTTTGAAACTCAGGTACTTTGTTACAAACATGCTTCATGCGATCATAATCTTGCATGTTTTCATAAGTTGCACTATGAAAGAGATAACTCAGTGCATATTAATCGTAGCATGGTAAACTTGTTTTGTCTGCCAACATGAGACTGTCATATGCTGTGTTGCAGCTTCTTTTAGGTGTGCTGACAGCATGTAGTTACAGTATATAGAAAAGGAGATAATCTGCAAGTCGTATTGCAGCTGTTTAAATGATGTGTCTAAAGGAAGAGATTGGAGTCTAAATGATGTGTCTGTTGTACATTTAGTGAAAACATCATTAATACCCTGACATGAGTTTGGAATTAAGCAGGGGCTGTGTCCTTTTCCAAGACGTAACAATGTTTGTGAAACCTGATCAATACTCTGATTAATAATCCATGATAGAATTATTATGGCTGCGCTGCTCCATTCAGTTGTCAATTTGTCATCAATGAAAAGCTTCTACACCTGTTTTTTGTTAGGCCATGGAAATTAATGACACCTGGATTTCATTATCCCAATTTTTGGTTAAGGTGTGGTCTTATTGCTTGATTATACTAAAAACCAAATGGGTTTTAGTTTGTTCAGGTTGGTTATTTCCATTGTTGAGTCTAAGAAAACAAATTAAAGATGCCTAAGGATGAAATTTGCTAGGTATCTGTGGTGGCGTTGGCATTAGATGTAGCTGTTCCCCATTAGCTATGCAGTGGCTGTATGAACTGTGAAGGGTACAGAATCTTAAGGAGCCCTTGATAGAGTCATTGAATCCTTTTTGCTCTTCATACTACAGGCTTTTGAGATCTGTCTTGTAGAATAACCGATAGCTGATAAGTTGTCCTTGTTCTAACTATGCTTTGTTGCACAGCTATCTTCCCTAAACAAGGAATTAGACGAAGCTAAACAGGCAATGCTGGAGCTAGAGAACAAACTGAAGTTCAAGGAAGAGACAGCGGCTGCAGCAATGGCGGCACGTGATGCCGCAGAGAAATCATTGAAACTAGCGGATATGAGATCAACCAGGCTGCGAGAGAGACTGGAAGAGATCAATAGGCAGCTCGAAGAATCAGACAACAGAAGGGACTCGAGCAATCGCAACGGGCATAGGTATATGTGCTGGCCATGGCAATGGTTGGGGCTGAACTATGTGCGATTGCCACCGACAGAGGCAGATCAAACCTCCAACGAGATGGAGCTATCTGAACCTCTGATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029254