BGIOSGA029255

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Revision as of 09:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029255| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029255, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA029255

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029255, complete gene.

LocusTag

OSJNBA0070E11.6

Ensembl Transcript ID

BGIOSGA029255-TA

Ensembl Protein ID

BGIOSGA029255-PA

Length

5087

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21332746..21337832

Sequence Coding Region

21336528..21337832,21336124..21336414,21335960..21336019,21334507..21334719,21334367..21334387
,21334069..21334288,21333869..21333985,21333675..21333772,21333466..21333554
,21333144..21333246,21332942..21333069,21332746..21332818

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21332746..21337832 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21332746..21337832 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCGACGAACCAAAGAAACGGACCAGCGCACGGCGCGCGCGCCGCCGCGCATCGGCTGGTTTGACGAAGGCAAGTGAAGAAGAAGAGCACGTGGTGGTGGTGGTGCCCCCATGGGCGGACCTCCCGTTCGATCTCCTCGCCGACATCTCGCGCCGCCTCCACGCCACCGCCGACTTCGCCCGCTTCCACGCCGTCTGCAAGTCATGGCGCCGCACGCTCCCGCCCCATCCCCCCACCTTCCTGCCGTGGCTCCTCTCCCCCGGCGACGCCACCGGCCACCGCACCGCCCGCTGCGTCTTCTCCAAGTCCAGCCGCCACCCCGCCGCCGCCCCGATCCGAATTCCAACCAAGAGCCAGCTGGCGATCGGCTACGACGGCGAGCCCTGCAGCCTCTACTACCCTCTGATCATGACCGGAGGAGCCGCCGCCACCACCCCTCTGCCCTCCTGCCCAGATGAGATGAAGACGTGGGCCGATCACTTCTTCTTCTCCGTCTCCGGCGACGGCACAGTCTTTGTGTACGCCCTTGGTGAAACCTATTGGGATCAATACGATCACGCGTACAGGTGCCACTTCCACGCCGCAATCCTGCGTCCCGGCGACGAGGCGTGGATGCTCATGGATAGGCATCTCATTGTCAACTTCCCCTACCTCTTGAGGGATGTCTGCCGTGTCCTATATACCGACGGCGGCAAGATGCTACTGCACAATGGTAAGGATTATTGGTGCGTCGTGACGACCGGAGCAGCCACCACCGCCGGCGAAGGCAAGTGGAGTCGGTGGTGGCCAGAAGAGCCAGGCAAGGAGATCCAATCCAGCCACCTCCTCGAATATCGCGGCGAGCTGCTCTGGGCGTTCGTCCTCGCCGACAGCGGCTACTGCAGCGACGTCCGTGGCTGCCGTGTCGCCGGCAGGCCGCTGGCGAGCGCGTTGTCGGTGTCGGTGTACGCGCTGGAGGCGGAGGGCGGCGGCAGCTGGGTGTGGGTGAGGAAGGACGGCCGGAGCATGGACGACCGCGCGCTGTTCCTGGGGCGCCCGGTCAGCCTCGCCATGGACGCCGCGCAGCTGGGCGTGGGCCGCGGCAGCGGGTGCGCCTACTTCGTCCACAGGTGGGCGTGGGCGACGGCGGCGGGGCGTGAGCGGTGCCGCGTGTTGAGGTACAGCTTCGGCGACGCCACGTCGGAGGTGGTGGAGCTGCTTCCTCGCGCGGTAGCCCAGTGGTGGAGCGAAGGCGGCGACGGCTGCATCTGGCTCGCGTCGCCGCCGCCGCCTGCCATTGCTCTTGCTCCCACCACCATCGAGGAAATCAAAGAGAGAGGCCTGCAGGTTGTTGAGCCTAATGTGCAACTAATGAGGATCCACGTTGGCAATCTGCCGAGGAAAGTAGACAGCCATGGGCTGAGACGCTTCTTGATGAGCAAGATCAAGAGCAAGCATGGGCATGGGCATGACGGATTCGTAGTGGTTACGGATGCGAGGGTGATGTGCGAGAGAGGTAGCAGGGGACGTTTTTCACGAGGTTTTGGATTCGCAACAATGGCGATCGCAGCGGATGCTGAACCGGCCGACGTTGTCACCATGCTCAATGGACAGATTTTGGATGGGCGTCCCTTGCGAGTAAAATTTGCAGACAAGGACCAAAGGGGATCATCTGCTCACCATGCTACTGTGAAACGCCTGCATCTTCGTGCTGAGCTCTTTCTTCACAGTCTTCTTCTTTCTTCGAGAATCGGCATGTTCTTTTCTACTTTCTTGCTGCTGTTCTGGACCATTTATTCTTGGACTGTACGCCTGAATAGAGATGAGATCGGCAACCTGAGGATCAACAACTCCTGGGATTCGCAGAGATATGATACCTTGGATCAGGTTAAGGAAGCTCTTGAAAAGCTTCCAAGAATAGAGATTTCTCATTGTTGCAGTGTTGCCTCACGTCATGGTTTAATCAGCGGGTGGAAATTTTCAGGGAAACATTGTTTCAACGGGAGAAGCCTGCATCACATTTCAGAGGACTCCCTCAATCCGTACGAGCAAGCGATTAGTATCATCGGCAAGACCTTATCGACGTTCGACGAAGACAACAGGATCCCATGTTTTGGATTTGGGGACACATCGACGCACGACCAAAATGTCTTCAGCTTCTACTCGGGCAGGCGACAGTATTGCAATGGTGTTTCTGAAGTTCTAAGGGGATACAGAGAAATTGCGCCACGTGTCCGGCTGTCAGGTCCGACATCTTTAGCTCCAATAATAGAAACTGCAATGAGAATAACTCAGGACTCCGGCTACCAGTATCACATCCTACTGATAATAGCTGATGGGCAGGTTCCAAGATGTTGTGGTGCTAACTCTGCGAACAATCGGGATGAGAACTACCTGGAAGAAAGGACTCTACAGGCTCTTGTTCAGGCGAGTCATTTCCCTCTTTCTATCGTGCTTGTCGGAGTGGGCGATGGTCCATGGGATGAGCAGCTGATGCACTGTCAGGAGGATCGACAGCTGTTTGACAATTTCCAGTTTGTTGATTTCACCAAAATAATAATGTCAAGAGAAATGCCTGAAACCGAGAAGGAGGAACAATTTGCTTTAGAAGCGCTGAAGAAGATACCGAGCCAGTACGCAGCCATAATCAGCAAGAGGATCAGTGATCTGGCTGCAGATGCGCCTTCAAGGATGCCTCTTCCTCCCCCTCCTTCAAGGCCTGTTATTTCTACCTAA</cdnaseq>

Protein Sequence

<aaseq>MPDEPKKRTSARRARRRASAGLTKASEEEEHVVVVVPPWADLPFDLLADISRRLHATADFARFHAVCKSWRRTLPPHPPTFLPWLLSPGDATGHRTARCVFSKSSRHPAAAPIRIPTKSQLAIGYDGEPCSLYYPLIMTGGAAATTPLPSCPDEMKTWADHFFFSVSGDGTVFVYALGETYWDQYDHAYRCHFHAAILRPGDEAWMLMDRHLIVNFPYLLRDVCRVLYTDGGKMLLHNGKDYWCVVTTGAATTAGEGKWSRWWPEEPGKEIQSSHLLEYRGELLWAFVLADSGYCSDVRGCRVAGRPLASALSVSVYALEAEGGGSWVWVRKDGRSMDDRALFLGRPVSLAMDAAQLGVGRGSGCAYFVHRWAWATAAGRERCRVLRYSFGDATSEVVELLPRAVAQWWSEGGDGCIWLASPPPPAIALAPTTIEEIKERGLQVVEPNVQLMRIHVGNLPRKVDSHGLRRFLMSKIKSKHGHGHDGFVVVTDARVMCERGSRGRFSRGFGFATMAIAADAEPADVVTMLNGQILDGRPLRVKFADKDQRGSSAHHATVKRLHLRAELFLHSLLLSSRIGMFFSTFLLLFWTIYSWTVRLNRDEIGNLRINNSWDSQRYDTLDQVKEALEKLPRIEISHCCSVASRHGLISGWKFSGKHCFNGRSLHHISEDSLNPYEQAISIIGKTLSTFDEDNRIPCFGFGDTSTHDQNVFSFYSGRRQYCNGVSEVLRGYREIAPRVRLSGPTSLAPIIETAMRITQDSGYQYHILLIIADGQVPRCCGANSANNRDENYLEERTLQALVQASHFPLSIVLVGVGDGPWDEQLMHCQEDRQLFDNFQFVDFTKIIMSREMPETEKEEQFALEALKKIPSQYAAIISKRISDLAADAPSRMPLPPPPSRPVIST</aaseq>

Gene Sequence

<dnaseqindica>1..1305#1419..1709#1814..1873#3114..3326#3446..3466#3545..3764#3848..3964#4061..4158#4279..4367#4587..4689#4764..4891#5015..5087#ATGCCCGACGAACCAAAGAAACGGACCAGCGCACGGCGCGCGCGCCGCCGCGCATCGGCTGGTTTGACGAAGGCAAGTGAAGAAGAAGAGCACGTGGTGGTGGTGGTGCCCCCATGGGCGGACCTCCCGTTCGATCTCCTCGCCGACATCTCGCGCCGCCTCCACGCCACCGCCGACTTCGCCCGCTTCCACGCCGTCTGCAAGTCATGGCGCCGCACGCTCCCGCCCCATCCCCCCACCTTCCTGCCGTGGCTCCTCTCCCCCGGCGACGCCACCGGCCACCGCACCGCCCGCTGCGTCTTCTCCAAGTCCAGCCGCCACCCCGCCGCCGCCCCGATCCGAATTCCAACCAAGAGCCAGCTGGCGATCGGCTACGACGGCGAGCCCTGCAGCCTCTACTACCCTCTGATCATGACCGGAGGAGCCGCCGCCACCACCCCTCTGCCCTCCTGCCCAGATGAGATGAAGACGTGGGCCGATCACTTCTTCTTCTCCGTCTCCGGCGACGGCACAGTCTTTGTGTACGCCCTTGGTGAAACCTATTGGGATCAATACGATCACGCGTACAGGTGCCACTTCCACGCCGCAATCCTGCGTCCCGGCGACGAGGCGTGGATGCTCATGGATAGGCATCTCATTGTCAACTTCCCCTACCTCTTGAGGGATGTCTGCCGTGTCCTATATACCGACGGCGGCAAGATGCTACTGCACAATGGTAAGGATTATTGGTGCGTCGTGACGACCGGAGCAGCCACCACCGCCGGCGAAGGCAAGTGGAGTCGGTGGTGGCCAGAAGAGCCAGGCAAGGAGATCCAATCCAGCCACCTCCTCGAATATCGCGGCGAGCTGCTCTGGGCGTTCGTCCTCGCCGACAGCGGCTACTGCAGCGACGTCCGTGGCTGCCGTGTCGCCGGCAGGCCGCTGGCGAGCGCGTTGTCGGTGTCGGTGTACGCGCTGGAGGCGGAGGGCGGCGGCAGCTGGGTGTGGGTGAGGAAGGACGGCCGGAGCATGGACGACCGCGCGCTGTTCCTGGGGCGCCCGGTCAGCCTCGCCATGGACGCCGCGCAGCTGGGCGTGGGCCGCGGCAGCGGGTGCGCCTACTTCGTCCACAGGTGGGCGTGGGCGACGGCGGCGGGGCGTGAGCGGTGCCGCGTGTTGAGGTACAGCTTCGGCGACGCCACGTCGGAGGTGGTGGAGCTGCTTCCTCGCGCGGTAGCCCAGTGGTGGAGCGAAGGCGGCGACGGCTGCATCTGGCTCGCGTCGCCGCCGCCGCCTGCCATTGCTCTTGCTCCCACCACCATCGAGGTAACCCAACCGCGCGCACAAAAGTGATCCATCTAGTAGAAATAATGATCAGTGATACTATATATATAATCTGCGAGTTAATTAATTAACCAAGCTTAGCTTGATCGATGCAGGAAATCAAAGAGAGAGGCCTGCAGGTTGTTGAGCCTAATGTGCAACTAATGAGGATCCACGTTGGCAATCTGCCGAGGAAAGTAGACAGCCATGGGCTGAGACGCTTCTTGATGAGCAAGATCAAGAGCAAGCATGGGCATGGGCATGACGGATTCGTAGTGGTTACGGATGCGAGGGTGATGTGCGAGAGAGGTAGCAGGGGACGTTTTTCACGAGGTTTTGGATTCGCAACAATGGCGATCGCAGCGGATGCTGAACCGGCCGACGTTGTCACCATGCTCAATGGACAGGTCAGTATGATGTATGTGCTTAATTAGTTAATTCGCTGCGTAAATCCACATGGGATTGATGTATAATCTTCCGTGAATGGTGAATTGATGATAACTTCTTGCAGATTTTGGATGGGCGTCCCTTGCGAGTAAAATTTGCAGACAAGGACCAAAGGGGATCATCTGTATGTGTCTAGCACTGCATGCGCTCAGTGAACTTGCAAATTGTTAAGAGCTGATCGAGGCAACGCAAATGGATGATCGATGCTGATGGTTATTTTCATGTGAAGGAGGAGAGGAGAGTCTGGAATACCAACCTTCATTTGGCAATCTCTTCTATTTGGAAGTTCATATGATTACATTCACACACACACATCTATATAAATATCCTCTTCTATATAAATATATCTGCATCGATCTTCAGGGGAAAAGAATATTACGCGGTTTTGTCATACTCACAAGTTGCTATGAATTTTAAGTTGCAAATTTGTAGAGTGATATATTACGTATTAATATATTTTATCAATTTTTTTTTTAAAAAATCATAACTATTTGAGTGGCATTGATCTTGGGGGGACTACTACACGGTTTTCTCATACTCACACATCAGAATATTGCTTTCTCTTTAGCGAATTCGATTACGAAATTAAGAAAGTTATTACATTCCGGGCAGGTAATTGCGGGAAAATAGAACAAGATTCTGAGCTGCTGGTCTAGTGCTCGCCACATGACTGTAGCATCCGGCTCGTCAGGTCAAGTCGTCGTCCTGCAGGCCGTCTCACTTTCACTGAACGCGGATTGCTTTTTTTCTTTTCTTCCTCTTCTCCCCGTCAAGGCAAATGCTACGCTTATGGCATCATGCAACTCGGTGATATTTTAATCATATGTTACTACATGGATACCATATTTTAGTATTGCTCTTAACTGAATTCTATGCTAGATAAATCCCATGCCACTACACTAGCCAGCCAACCACAACACCAAAGCATATTCCACTAGCCATGCCACTTTTCTTTTCTTTCAGGTATGAACTCACGAGTCAATTAAGAAGAACTCCAAGAATTCGCTGCCCTTCTTGCCTGCCACTACCGTATTTATACTTAATTAGTACGTGGTGCGAGAGCAAGAGATTACAGTAGTACTACTCAATTAGTCAGTGCTAGCAAAACAGCTGCACTTTGTCTGAAGACTGAAAGAATGAAAAATGCATCAAGCAATCAAGCATTGTAAAACAGCCTGAGCCTAGTATTTTCACGGCAACCACCATCTACTCGTTTCAGCGTACACAGCGACAACCCTTGCGCGTTCTTGCCATATTCTTTTATCTAAAATTTTAAATCAACGGAGTTGTTGCTCTGAAGCTTCCTGACGACCAATCGCTCGCCTTCGCTTCAGCTGATTCGCTTCCTTCGTTACTGTATATAGGCTCACCATGCTACTGTGAAACGCCTGCATCTTCGTGCTGAGCTCTTTCTTCACAGTCTTCTTCTTTCTTCGAGAATCGGCATGTTCTTTTCTACTTTCTTGCTGCTGTTCTGGACCATTTATTCTTGGACTGTACGCCTGAATAGAGATGAGATCGGCAACCTGAGGATCAACAACTCCTGGGATTCGCAGAGATATGATACCTTGGATCAGGTCAGTTGCAGCCTGTATGAGTAGTTCTTGAACTGAACTTTTTGCATGATTTGCCAATTTATCATCCAGTTACTCAGAAGTGTATTGTTGAGTTATCTTTGCATGATTCATCCATGCAGGTTAAGGAAGCTCTTGAAAAGGTCGGTCTCGAGTCGTCCAATATTATCATTGGAGTGGATTTCACCAAAAGCAATGAGTGGACAGGCATATATTTTTAGCTTCCAAGAATAGAGATTTCTCATTGTTGCAGTGTTGCCTCACGTCATGGTTTAATCAGCGGGTGGAAATTTTCAGGGAAACATTGTTTCAACGGGAGAAGCCTGCATCACATTTCAGAGGACTCCCTCAATCCGTACGAGCAAGCGATTAGTATCATCGGCAAGACCTTATCGACGTTCGACGAAGACAACAGGATCCCATGTTTTGGATTTGGGGACAGTAAGCAAAAGCTTCTCCATCGTCTTCTAGTTCTTTCTCTCTGCAATCTGCATTTCTCTGTTCAGAAATGAAGTGATTTTCAGCATCGACGCACGACCAAAATGTCTTCAGCTTCTACTCGGGCAGGCGACAGTATTGCAATGGTGTTTCTGAAGTTCTAAGGGGATACAGAGAAATTGCGCCACGTGTCCGGCTGTCAGGTATCTATATTGTGACCGACGAGTTCATTCTTGCGAAGGATGAACGATGAATTCATCTCTCTTCTTCAGAAAGATAACTGGTGAGTTGTGGTTTAGGTCCGACATCTTTAGCTCCAATAATAGAAACTGCAATGAGAATAACTCAGGACTCCGGCTACCAGTATCACATCCTACTGATAATAGCTGATGGGCAGGTGTGCCTTTTTCTCTGAACTTCTGAAAAGAAGTTGCCGTTCTTCCAGAATCTTATTGACACCTTACCTGTTCCACTAGTTTTTTTTTTAAATCCATGTATTTTGCTCATGCTACCTCAGGTTCCAAGATGTTGTGGTGCTAACTCTGCGAACAATCGGGATGAGAACTACCTGGAAGAAAGGACTCTACAGGCTCTTGTTCAGGCGAGGTACATAGTGGCAACACTAATTAGATTAGATGTTTCTGAATTCTATCTAAAAGTACTGACTGAACATAAGGTGCAACTTTTTTCCCTATATTAATAAACTTCGGCTGGCTTCCGCCAGCCCGGCGAAAAAAAAAAACATAAGGTGCAACTTACTATTCTTTTAAAATATATAGCTATACTTGAATTTGAGTAAGGAAAATGTGTACTTATGCTATGCAGTCATTTCCCTCTTTCTATCGTGCTTGTCGGAGTGGGCGATGGTCCATGGGATGAGCAGCTGATGCACTGTCAGGAGGATCGACAGCTGTTTGACAATTTCCAGGTGTTTGTTGGGCATCACAACATTGATTTATATGGGAGGATTTGCTCATAATTAAGCTAGTTTTGTCTTTGCAGTTTGTTGATTTCACCAAAATAATAATGTCAAGAGAAATGCCTGAAACCGAGAAGGAGGAACAATTTGCTTTAGAAGCGCTGAAGAAGATACCGAGCCAGTACGCAGCCATAATCAGCAAGAGGATCAGGTTTGTAGCATATCTGACAGGAACTGAAGATACAAATAGCTGGTTTCACCTGTTGCTACCTGCTAGGAATGTTCTTTTGGTTCTGAATTCTGATTCATTTTCCTATTGTGTTGTGGTGTTCAGTGATCTGGCTGCAGATGCGCCTTCAAGGATGCCTCTTCCTCCCCCTCCTTCAAGGCCTGTTATTTCTACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029255