BGIOSGA029257

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Revision as of 09:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029257| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029257, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA029257

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029257, complete gene.

LocusTag

OSJNBA0070E11.4

Ensembl Transcript ID

BGIOSGA029257-TA

Ensembl Protein ID

BGIOSGA029257-PA

Length

6462

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21322870..21329331

Sequence Coding Region

21328120..21329331,21326721..21326966,21326097..21326417,21322870..21323556

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21322870..21329331 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21322870..21329331 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGCCGTCTCGTCCAGCTGCGGCTGGCCCAACCTCCCGCCGGACCTGCTCCGGGAAATCTCCGGCCAACTCCATGACGCCGTCGACTTGTCCCGCTTCCACACCGTGTGCACGGCATGGCGTGACATGGTCCGGTTGCCGGCGGCGGAGCCCCAATGCCCCGCGCTGCTGCCGTGGCTCGTCGCCCGTGGCTGGCCCGGCTGCTTCTCCCGCTCGCACCTCCGCTCCATCTTCTCCAACGCGACGCCCGCCTGGCACTCCCCGAGGCCGACCACCCGCGACATGTGGCTGGCGTCCACGGACGGCGCCGGGGTATGGGTCCTCACCGCCGACGGCGACAGGCTCGTCGACCCCCTCACCGGAGCCACCGTCCGCCGGCTCCCTCGCCTCCCTCGCACCAGCAACAATGACCACGTCTGCTACATCGACGGCGTCGTCTGCGGCGACGGCACCATCGTGGCGTACGCCACTTCAGATGGGTTCAAGCACTCCTCCCAGATCGAGGCAGCCATCCTCCGCCCCGGCGACACGGCGTGGACGACGGTAGAGTCGAAGGGGATGATGCACGCCGCCTTCGGGTACGGCTGCTGCACCACGTATCACCAAGGCGGCGTCGTGTTCGCCGACCTGTACCAGACGTTCGTCGTCAGGGTGCTCGTCGACGACGACGACGCCGCCGGCGGCGGCCGAGTCGTGGAATCCAGGACAAGAAGATGGCCGCCTGATTATGGCTTCCTGCACAAGCGGCTGCTATCGACGTACACCTTCGAGTTTCGGGGCAAGCTGATGTCCGCCTGCGTTGAGATTCCATGGCAGAGCAGCGCCTACCAGATCGACGCCGCCGCGCTGTCGGTGTCCCTGTACACGCTGGAGACGACGGCGGCGGCCGGCGACGGCGGTGAGCTGGCGCATCTGTGGGTGAGGGCGGCGGACGGCGGGAGGCTGCTGGGTGAGCACGCGCTGTTCCTGGGGTGCCCGACCAGCTTCGCCGTCGACGCCGCCAGGTTCGGCGCCGGCGGCGAGGTGAGCGGCGGATGCGCCTACTTTGTCATTTGGACAATGCCGGATGTGTGCCACGTGTACAAGTACTCCTTCCACGACGATGTGGCGACGCCAATAGCAGAGCTGCCATTCGAATGGACCTTCATGATCAAGAGAACACTGTGGTTCCTGCCCCAGTATTCCAGCGTAGCCCCAACTCCAACCCAAGAAATCAGAGAGAGGCTGATTCGGCATGGAGAACGACCAAAAACTTTCAAGATTAAGTTGAACAATCTGACACCACGGGCTAGGCTAGGATCGAGTGGAGATTCTTGGTTGCGAGGGGAATTCCGCTATCATGGCTACGTGATCGATGCTAACGTTCACTACCGCAACGGCGCAATCTTCGGGGTGGTAACAATGACCACCGTTCAGAAATCGGCTGATATTGTCGCTGCCCTCGACAAAAGAGGGTTGCTGGACTTGCATCCCCTGTTAGCAGTGGAATTTGCAGAGCAGCGGCCGCGACAAGAGTGGATCCTGACAGAGGCGGCTCTAGCTATAGCTCCAACGACTGTTCATAGTTTTTCACCGAAAGATTTCAGTATCTACGTGGGAAATCTTCGATGGGATGTTGATCGCCTTCGTCTGCTAAAGTTTTTCGGAGAGCATGGACGAGTTTTGGTAGCTCAAGTCGTGTGTTACAGACAAACCGGGCGCTCCAGAGGATTCGGCTTCGTGAGCATGGCCACATTGAGGGAACCAGACGATGTCATCGCTTCCCTCAACGGACAGGAAGGTAGGGTGGACGAGCGAGGCGGCGGATGCACGGCGGCGGCAGACGTGGGCGGCGGCGGCGACGGGGCGAGGAGGAGCGGCGGCGACGGCGACGGCGAAGTGAGCACTGAGCAGGAGGAGACGCGGGCGGCGGCGGCAGATGCGGACGAGCGCGGGTGGCGGGGCGAGGAGGAGCGGCGGCGGCAGATGCGGACGCGCGGGAGTGGCGGGGCGAGGAGCAGCTGCCCCGCGGGCTCCTGCTCCGGCGCCGGCGAGGAGGGCCGTCGCCCCGCGGCATCCGCCTCCTCCGGCTCCGGGTCTGGCTCGTCCCGCGCGTCACTGAAGAAGTTGGCGTCGATGCGGTCGTCGGCGGCGCCATCCTCGTCGTCGTCGCCGTCTCCCCACGAGCGGTTGCGGCGGGAGCCGCCGCGGCGGCAGCAGCGGATGCGCTGCGGCGTGCGGCGGCAGACGCGGGCGGTGGGGCGAGGAGGAGCGGCGGCGGCAGCAGACGCGGGCGGCGGGGCGAGGAGGAGCGGCGGCGACAACGAAGTGAGGAGTAGGGAGGAGCGACGCCCGTGGGAGAAAAAAAGAAACGCCAACCGTATTTTGTGTAATGCAGAGGTGGATAATTTTTTCCCCGAAAAGCAGGGGGTAGAGGTGATTTTGATTTTTACTACACTAAAAGCTAGCTTTGGGCAAAAATAG</cdnaseq>

Protein Sequence

<aaseq>MDAVSSSCGWPNLPPDLLREISGQLHDAVDLSRFHTVCTAWRDMVRLPAAEPQCPALLPWLVARGWPGCFSRSHLRSIFSNATPAWHSPRPTTRDMWLASTDGAGVWVLTADGDRLVDPLTGATVRRLPRLPRTSNNDHVCYIDGVVCGDGTIVAYATSDGFKHSSQIEAAILRPGDTAWTTVESKGMMHAAFGYGCCTTYHQGGVVFADLYQTFVVRVLVDDDDAAGGGRVVESRTRRWPPDYGFLHKRLLSTYTFEFRGKLMSACVEIPWQSSAYQIDAAALSVSLYTLETTAAAGDGGELAHLWVRAADGGRLLGEHALFLGCPTSFAVDAARFGAGGEVSGGCAYFVIWTMPDVCHVYKYSFHDDVATPIAELPFEWTFMIKRTLWFLPQYSSVAPTPTQEIRERLIRHGERPKTFKIKLNNLTPRARLGSSGDSWLRGEFRYHGYVIDANVHYRNGAIFGVVTMTTVQKSADIVAALDKRGLLDLHPLLAVEFAEQRPRQEWILTEAALAIAPTTVHSFSPKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVAQVVCYRQTGRSRGFGFVSMATLREPDDVIASLNGQEGRVDERGGGCTAAADVGGGGDGARRSGGDGDGEVSTEQEETRAAAADADERGWRGEEERRRQMRTRGSGGARSSCPAGSCSGAGEEGRRPAASASSGSGSGSSRASLKKLASMRSSAAPSSSSSPSPHERLRREPPRRQQRMRCGVRRQTRAVGRGGAAAAADAGGGARRSGGDNEVRSREERRPWEKKRNANRILCNAEVDNFFPEKQGVEVILIFTTLKASFGQK</aaseq>

Gene Sequence

<dnaseqindica>1..1212#2366..2611#2915..3235#5776..6462#ATGGATGCCGTCTCGTCCAGCTGCGGCTGGCCCAACCTCCCGCCGGACCTGCTCCGGGAAATCTCCGGCCAACTCCATGACGCCGTCGACTTGTCCCGCTTCCACACCGTGTGCACGGCATGGCGTGACATGGTCCGGTTGCCGGCGGCGGAGCCCCAATGCCCCGCGCTGCTGCCGTGGCTCGTCGCCCGTGGCTGGCCCGGCTGCTTCTCCCGCTCGCACCTCCGCTCCATCTTCTCCAACGCGACGCCCGCCTGGCACTCCCCGAGGCCGACCACCCGCGACATGTGGCTGGCGTCCACGGACGGCGCCGGGGTATGGGTCCTCACCGCCGACGGCGACAGGCTCGTCGACCCCCTCACCGGAGCCACCGTCCGCCGGCTCCCTCGCCTCCCTCGCACCAGCAACAATGACCACGTCTGCTACATCGACGGCGTCGTCTGCGGCGACGGCACCATCGTGGCGTACGCCACTTCAGATGGGTTCAAGCACTCCTCCCAGATCGAGGCAGCCATCCTCCGCCCCGGCGACACGGCGTGGACGACGGTAGAGTCGAAGGGGATGATGCACGCCGCCTTCGGGTACGGCTGCTGCACCACGTATCACCAAGGCGGCGTCGTGTTCGCCGACCTGTACCAGACGTTCGTCGTCAGGGTGCTCGTCGACGACGACGACGCCGCCGGCGGCGGCCGAGTCGTGGAATCCAGGACAAGAAGATGGCCGCCTGATTATGGCTTCCTGCACAAGCGGCTGCTATCGACGTACACCTTCGAGTTTCGGGGCAAGCTGATGTCCGCCTGCGTTGAGATTCCATGGCAGAGCAGCGCCTACCAGATCGACGCCGCCGCGCTGTCGGTGTCCCTGTACACGCTGGAGACGACGGCGGCGGCCGGCGACGGCGGTGAGCTGGCGCATCTGTGGGTGAGGGCGGCGGACGGCGGGAGGCTGCTGGGTGAGCACGCGCTGTTCCTGGGGTGCCCGACCAGCTTCGCCGTCGACGCCGCCAGGTTCGGCGCCGGCGGCGAGGTGAGCGGCGGATGCGCCTACTTTGTCATTTGGACAATGCCGGATGTGTGCCACGTGTACAAGTACTCCTTCCACGACGATGTGGCGACGCCAATAGCAGAGCTGCCATTCGAATGGACCTTCATGATCAAGAGAACACTGTGGTTCCTGCCCCAGTATTCCAGCGTAGCCCCAACTCCAACCCAAGTACTCACTTATACTCCTAACTACTACTCCGTCACTGGAAAAAACAAATCCTATTACAAATCTAAACATATATATATATATATATATATATATATGTAAGCTAGGAGGATTTGTTTTTTTAGGACGAAGGGGTACTTCCTTACTCCCTTCCACAATGCGACTAGTTTTGTTTTGTCCAAATGGCTTGTACATCTGGTTTGAAAAGGAGATGGCCGTGTTTTTAATCTATTTTTAAAAAAGAGAGTTTTTTCTAAGTCAAATTTGTTAAACATTGACCGATCGAGTTTATGAAAACATGCATCAACATCTACAAGATCAGAATAATCTTATTATTAAATTACCCATCAAAGATATTTTGTTAATGATATATATTGTTCTAGGTGTTGGGTATATTTTCCTTAAACCCGGTAAACGTTAGATAAGTTTAACTTAAGATAAAGCTAAAATAATTTACAATATTAAACGGAGGGAGTACCCATCTTTCTAGTAACAAACTTGCAAATTCTTAACTTGTTTAGGTCACTAAAATTGCTTTACCTTTAACCTAGCTTTGGATTTGGGAGAAATAGGAGGGGGTGACTCACCGATGACAACGACTTCCATGCGGTGGTGACTAGATGGCGAGCTCTTCTTCGGCAACTATGTGGTGGTAGGAAGGTTAGAGTCTGGAGTTTTTGGGTAGGGGTCAGGATGGAAAGGTGCTTGGGGAGTGGAAATGATATCTCTACTGTTTACATATGAAATTTCGACGCAATCCTAGTTGTCTAAAAAATTAACCGCAAATTTATGGTATTTTCATACGGTTTTGCAATTTTACTTGCGATAGAATTTTGGCTCCTATATTTCACTTTTTTCATCCATATGATCTTGCATCAAGATTCATGTTCTTGTATGTTCAACTTATAGTTTCATAGCGCTCATTTACACTCAGTTACAGTCCACCAAAGTTGATTTTATAATATTTTTTTCCTCTAGATTTACAATTTTTGACATGTTTGTCTTTTAGTTATTTCATTTAAAACGAGCTATATGCATTGGTTGAAAATTTTACAAGATTCGAAACTACAATTCTGTCGAAAGCTCAATAGATAGTCCCATTTTCATATGCTTGAAAAACTAGACAGACCCATAACACATTTGTGTCGTTTGGCAGGAAATCAGAGAGAGGCTGATTCGGCATGGAGAACGACCAAAAACTTTCAAGATTAAGTTGAACAATCTGACACCACGGGCTAGGCTAGGATCGAGTGGAGATTCTTGGTTGCGAGGGGAATTCCGCTATCATGGCTACGTGATCGATGCTAACGTTCACTACCGCAACGGCGCAATCTTCGGGGTGGTAACAATGACCACCGTTCAGAAATCGGCTGATATTGTCGCTGCCCTCGACAAAAGAGGGGTCAGACCTTGAGTTCTTTTTAGCAGCTACCTTGATATAAATATATAGTCTGAATGACTGACTTTTTTTTTTAGAGAAGCACCATTTGCAAATTCATCATTTGCATGATTACCTGCATATATACTTATGTTTCACCATGTTGGATCAATTCTGCATTATCAGTAGTTTTTTTTTGAACAAGCATTATCAGTAGTAACTCAGTTTTATTTCCTTGAGAATCTTGGCTTGCTATATATGAATTCACCTGCTTATAATTTTAATCTTCACCTTGTTGAATTAACCCCTGCATCTGCATGCATGCAGTTGCTGGACTTGCATCCCCTGTTAGCAGTGGAATTTGCAGAGCAGCGGCCGCGACAAGAGTGGATCCTGACAGAGGCGGCTCTAGCTATAGCTCCAACGACTGTTCATAGTTTTTCACCGAAAGATTTCAGTATCTACGTGGGAAATCTTCGATGGGATGTTGATCGCCTTCGTCTGCTAAAGTTTTTCGGAGAGCATGGACGAGTTTTGGTAGCTCAAGTCGTGTGTTACAGACAAACCGGGCGCTCCAGAGGATTCGGCTTCGTGAGCATGGCCACATTGAGGGAACCAGACGATGTCATCGCTTCCCTCAACGGACAGGTGAGGCGCCACAACTAGATCAGTGCATATTATTACCCTGCTTATTTACAATTTGTTATGGTCTTTTGTACAAATATTTCCCTTACTATATTATTTGAAGAGATAATTATTATTTTTCTAATTGTAATCCACCTTCATGTTAAATCATGCAGATCATGGATGGCCGTCCCATGAGAGTGAGCTTTGCAAAGTGGCAACCACGGCTTGGTTACTAAGACACTATTTAGGAGAGCTTTTAGTTCCAATTCTCTCTAGATTAACAATGCTAGATTCTCGCTGGCTATCATTACTAATTACTTCTTACGATCTCTAGCTCCCTGAATATGGCTCATCAGGAGCCAGAATACGAAATGTAAATGGAATGGGGGCATTATTCACTAGTGTTGCAATTCACGCAGAACAAATTAAATGGATTTCTTATCAAAGAATAACAAATTTCTTATTACTGGTAACAAAAGATTTCGTTCACTCTTGCTTTGCTAGCCTCTCAGAGATCAAATTCGTTTTAACTCAAAAGGAAAAAGAATCAATTCGTTTATGCTTGTCTATCTTATTCTTGTTTTGGGAGGAGCTCGTCTATCTGTTGATCAACACGTAAGCAAACACACAGCCACGGGGAGGGCCCAATTATAAAACAGCCCACTCGCCTTCATGTAATCTTTCGCGAAGGAAAGGCCCAGACGTCCGATGAAATTCCATGTGGGCCGAGAAAACGGGCTTTTCTCTTTTTGTTCATTTTTCTTTTTTGGAGGGATGGCTACGATCGTTTACTACTCCATTATATGGTACCCCTCCATCCCTAAATATTTAACGCTATTAACTTTTTTTTAATTATCTTTGGTCATTAGCCTTATTCAAAAACTTTTGAGAAATATGTAAAAATATATGTATACATAAAAGTATATTTAACAATGAATCAAATGATAGGAAAATAATAATAATTACTTTTGTGAGGATTGAGCCTTTTTTTTTAAAAAAAACGAGAATAAGAGATGAGTCGTTAGCACAAGATTAATTAACTATTAGCTATTATAAATTTTAGAAACAAATTTATTCGATTTATTTAAATTTTTTTAAGAAACTTCATCTGTGAAAAATTAAGCACACTTTCTACTTATACGTAAATGGGCCACATCCACACATACAGCTTCACCAGCGTGGCAACTGTTAATGTTATAAAGTTTGGTGCTGAGCCGTCATGGTTTATTTTCAAAATAAGTTTTGGGCACGAATAAGTTTTATAGAAGGATTAAATTGTCAAATTGTAGTTACTTCCTCTATCTAAGTAGGGGAAAAAATTTGAATGGACGAGAGAGTACGTACTATGACGTAATGACGAAGTCAGTAGAAATACAAATCGAAGTGATCATCAATTAATTAATTATTATATATTATTAACTCGTTCAGATTAAGCTGACATACGTCCATCCTGCGAACGTTCGTATTACGTGCAGAAATAAATACTCGATCGCCTTGTAGGCTGTATCACGAGTACTGCGTATTGCGCTCCCTTTACATGAAAATATGTCGTTTTGAGTACGTACACGGATGTGTTCTTTTTTCGAGGGAAAATTACCGATGTGTTACGTTCTTTCAATACATATTTTGACCACTATATTTGTATATTGCAAATTAAAATATGTACAAGTGATCTCAACGAATTATATATATAGTATCTATGAAATACATATTCAGTATATTATTATAATAAGATGTATACAAATTAATATCTATGAATTGATCATGAATCCAATCTAAATGTCTTAAAAGGTAGTATTATTAATACTGAAAGTTTTTCCGGAGTTTTTGACTTTCCAAAACAATGTGTTTTTGTAACGGATAGGCGGATAGCGAAAGCTGGGTCTCGATCGTCCTAGCAAAGCAAATTGAAATGTAGATGCATGCACGCATGATTGGCATGATCCTCGATCGATCTCTTTTGACTGCAAATTAAATGGCGACCAAATAATGCGAACCCAGCATATATACCGTACCGTACTCAATTAAAAGCAGGTACAACCAAGAGCAACTGTGTAACAACAGTTTAGAGATCTATGGGTTGGTTTGGTTTGTGGCATAAATAGGACTTGTTAAATTTTATCAATGCTAAATTTTAGCAAGTTTTGGCATGACTAATTTTGGTAAGACAAAGTTGTGTTTGGATTAAAGCCAAAATAGCCTAAGTTCACTATTGAAATGGCCTATTTTCTAAGGCATGTCAAAATTTAGCTTCAAACCAAATAGACACTAAACACTATTGAAATTAACAAATATTGGTAAGCCTAATTTAGGCCTCAAACCAAACCAGCCCTATATTACCATATCGTCCATAGGTTTTGAAGGGTGTGTTTGGTTGGGCTGTGACTTTTGAAAAAGCAGCTCTGGGCTGTGACTTTTTGAAAAGTAGCTTTAGAAAAGTAGCTGTGAGAAAGCCAAAAGCTTGTTTGGTTACACACATGTGGCTTTTGGAAAAGCTTCTCTCCTGACGAGTGGACCCCACATGTCATACACATGTATCTTCTCCATCTACACAAACACAGGAAGGTAGGGTGGACGAGCGAGGCGGCGGATGCACGGCGGCGGCAGACGTGGGCGGCGGCGGCGACGGGGCGAGGAGGAGCGGCGGCGACGGCGACGGCGAAGTGAGCACTGAGCAGGAGGAGACGCGGGCGGCGGCGGCAGATGCGGACGAGCGCGGGTGGCGGGGCGAGGAGGAGCGGCGGCGGCAGATGCGGACGCGCGGGAGTGGCGGGGCGAGGAGCAGCTGCCCCGCGGGCTCCTGCTCCGGCGCCGGCGAGGAGGGCCGTCGCCCCGCGGCATCCGCCTCCTCCGGCTCCGGGTCTGGCTCGTCCCGCGCGTCACTGAAGAAGTTGGCGTCGATGCGGTCGTCGGCGGCGCCATCCTCGTCGTCGTCGCCGTCTCCCCACGAGCGGTTGCGGCGGGAGCCGCCGCGGCGGCAGCAGCGGATGCGCTGCGGCGTGCGGCGGCAGACGCGGGCGGTGGGGCGAGGAGGAGCGGCGGCGGCAGCAGACGCGGGCGGCGGGGCGAGGAGGAGCGGCGGCGACAACGAAGTGAGGAGTAGGGAGGAGCGACGCCCGTGGGAGAAAAAAAGAAACGCCAACCGTATTTTGTGTAATGCAGAGGTGGATAATTTTTTCCCCGAAAAGCAGGGGGTAGAGGTGATTTTGATTTTTACTACACTAAAAGCTAGCTTTGGGCAAAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029257