BGIOSGA029272

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Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029272| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029272, complete gene.| tag = OJ1065_...")
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Gene Name

BGIOSGA029272

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029272, complete gene.

LocusTag

OJ1065_E04.22

Ensembl Transcript ID

BGIOSGA029272-TA

Ensembl Protein ID

BGIOSGA029272-PA

Length

4074

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21085447..21089520

Sequence Coding Region

21088897..21089520,21088207..21088401,21088030..21088132,21086965..21087608,21085868..21086563
,21085588..21085769,21085447..21085504

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21085447..21089520 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21085447..21089520 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTCCAGTGCGGTTACCTCCAAAGGCAAGGCCGTGTTCGAGCTGAAGCACAGGCTGGTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAGATTGGATTGGATGAGCTTGAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCCTTCTTGTCTTGCGTGGTTGACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGCATCAAGGTGATTGGCACATTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACGAAGATGGTGACCAGCATTGTCAAGCGCCTCAAGGATGCTGACTCTGTTGTTAGGGATGCCTGTGTTGATACCTGTGGTACCCTTGCATTGTGTGCTAGAGATTATGGGGATGGTGGCGCTGCATTGGTTGCGTTGGTGCGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTTCAGGCTGGGGCAGCGTCTTGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGCCCTGTTCTGCCGCAGATGCTTGTTCGTGTTGTTAAACTGCTAAAGAATCCCCATTTCATGGCAAAGCCTGCAGTGATTGAGTTGATCAGAAGTATTATTCAGGCTGAAGGTGCTTCTACAGAGCAGTCTTTAACATCTGCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGGACTACAAGGAAAGCAGCTTCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTGGTTGCCTCCTTTAGAACTTCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTCAAACCAGTGCGTGATGCAATTACCCAAACCATTCAGTTGTGGAAGGCTATTCCAGGGTCTGATACTCCCGAGCCATCAGAAGCTGGATCATCCACAAAAGAAAACTTCTTTGGTGACCATCATGATGGTAGAAGTATAAATGATGGTGGATCACGAGATACTTCTTTCAGGAGAGTTGATCCTGCATCTTCTGTTTCTGCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCTCCTCTGTCTATCAATAAAATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTGAGCGATTGGCATGTTGAGATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTTGAAGAAAAGGTGTCTGGCAATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAAATCGTAGACAATGACAGCAAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCCTCTATGTCAGAAGTAGCCAGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAATGCGTTGAGGATTGTGATTCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGTAAGAGCATAGACTCCACTGTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTGAGTGCAATGAAAGAACTATCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAAGCAAATATCTTTGATATGTTGCAGCAATTCATGTCTAACTCAGTGGAGAACATGTCAGTATTAAGCATGAAAGTGCATAATTTGGAGAATGCTGTAGACAAAACTGTGTACACAATTACTCAAAGTGAAAGCCGCTATCACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACTTCTTCACCGAGGGTTTCTACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCACCACCAATTCCTCATTTGAAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGCTTAAACATGGGTGTAAAAGAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGAAAGCCTGGGGTTGTGAGATCGGAAAGTACTCTGGGAAGATATGTTCCAAGCTCAGCAAGGACTCGAGCATCAGGGGTTAAGGGACACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTGAGCTGCAAAATGCATTGCGTGCTTCTAAGGAATTTGATGGTAATGATGACATGGAGTCTGCATATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGATAGAACTGGACCTGTTCTTGAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTTATAGCTGGCCAGTTTCTGAATAAAAAAATGTTTGATTTGGCACTGCCTTGGCTTCAACAGGTAGCGGATTTGAGCATGATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAAAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCTGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTTTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MKSSAVTSKGKAVFELKHRLVQAINKIADRDTYQIGLDELEKAADTLPPDMVGPFLSCVVDTDAEQKSAVRKECIKVIGTLARSHGSLVAPHMTKMVTSIVKRLKDADSVVRDACVDTCGTLALCARDYGDGGAALVALVRPLFESLGEQNRYVQAGAASCLAKVIDESNYFPGPVLPQMLVRVVKLLKNPHFMAKPAVIELIRSIIQAEGASTEQSLTSALTSIMDALKSSDWTTRKAASIALSSIALSSGYLVASFRTSCLRSLERSKFDKVKPVRDAITQTIQLWKAIPGSDTPEPSEAGSSTKENFFGDHHDGRSINDGGSRDTSFRRVDPASSVSAISGNSITSSKKRSPLSINKIALNNAANQQRSKLSDWHVEISVPKQNMIPLVDFEEKVSGNGSMLKGSNRSPYEIVDNDSKYEYDPMDDKQDCSSMSEVASRSCETKHVTSAQECVEDCDSARDIEQFPRAQKSKSIDSTVTDITSHGTHTCCLSAMKELSHIRKQLQEMERKQANIFDMLQQFMSNSVENMSVLSMKVHNLENAVDKTVYTITQSESRYHLPGSKFIKNQSATSSPRVSTSTPRSSVDANYKPPPIPHLKQEKKWMQDQPSKGLNMGVKEGEFLKSHTHDKTRKPGVVRSESTLGRYVPSSARTRASGVKGHFPVSLTNSCEQPELQNALRASKEFDGNDDMESAYVEALNSGDCDYLIDVMDRTGPVLEKLSRETTSELLRVIAGQFLNKKMFDLALPWLQQVADLSMIYKPSQLFVSVRAQKEFLALLEEAATSGSTEPAIRIAIAQLAFKLTKVCEVAPCRKVLSRVCRGNETIMATAM</aaseq>

Gene Sequence

<dnaseqindica>1..624#1120..1314#1389..1491#1913..2556#2958..3653#3752..3933#4017..4074#ATGAAGTCCAGTGCGGTTACCTCCAAAGGCAAGGCCGTGTTCGAGCTGAAGCACAGGCTGGTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAGATTGGATTGGATGAGCTTGAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCCTTCTTGTCTTGCGTGGTTGACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGCATCAAGGTGATTGGCACATTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACGAAGATGGTGACCAGCATTGTCAAGCGCCTCAAGGATGCTGACTCTGTTGTTAGGGATGCCTGTGTTGATACCTGTGGTACCCTTGCATTGTGTGCTAGAGATTATGGGGATGGTGGCGCTGCATTGGTTGCGTTGGTGCGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTTCAGGCTGGGGCAGCGTCTTGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGCCCTGTTCTGCCGCAGATGCTTGTTCGTGTTGTTAAACTGCTAAAGAATCCCCATTTCATGGCAAAGCCTGCAGTGATTGAGTTGATCAGAAGTATTATTCAGGTCTGAATTTTGCTCTTGTATCATCAACACCATTCGCTTCAAGCTTATCTAGTAGTACCTAATTAATGTGCTTTCAGTATTTTAAGGTGATTGCATTCCATGCTTATCTCTGGTGGTTGTTTAAGTAGCTTAGCATAATTAATTGCAATGGAGTAATTAGTATAATGAGCCAGGAGTACTTTATTATATGACTGCTCAGTCAGTTTCACATCAAAAAAGGAGTTCTCAAAAAGTCGAGTGTCTATTTTTATTTCAAACTTCTAGTTTCATCTTGAGACTGTTAATCTGGCTGTCTCTTTCTATGGATTTTCAGCAATACAATTGTCAGGATAATTGTGTTAGCTATGTTCATCCTTTTGGTGTCATAGATCAAATTTTCCTTCTTGGAAGTAGATTAGTCATATTCATCCTTTGATTTCGTCCTACAAGTGTTAGCCAAAACAGGAGATTGATCTTTTATAACATTTCTTATTTTTCTGCTGTCCCACTTTTCAGGCTGAAGGTGCTTCTACAGAGCAGTCTTTAACATCTGCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGGACTACAAGGAAAGCAGCTTCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTGGTTGCCTCCTTTAGAACTTCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTCAGCATACTAAGCATTCATGCTGTAATATTTTCTTGCATATGCTACACTTATTTTTCTGACTTCTGTCACAGGTCAAACCAGTGCGTGATGCAATTACCCAAACCATTCAGTTGTGGAAGGCTATTCCAGGGTCTGATACTCCCGAGCCATCAGAAGCTGGATCATCCACAAAAGGTATTACAATCCTTATAAGTAGATTTTTGGCCTGGTGTGATCTTCTGACTTCTGCAAATTAAAAGAAGAGATTGGATACTACTTTCTGAAGCTTGTTGACAATACTAATCCCTTTGTTTTTTTTAGCAATTTGTACTCTCATAATACTTTTTAGTTTCTTGAGAACTAGTGCATTGACCCCAAAAGATAAGGGGTTTATCAATGATTTGCTATTCAATGTTGCTTGTTGCATGCCAAGTCTATCTACTGCTTAGGTCTGTCCAAGGATCAGGATTTTTTTCCCAGATTTCCAGATCTCTATGGTCTTTTTTCTTAAAATTTTCTTGTTAGTCCTTTACGAGCTTAACATAGAATCTGTTTGAAGTTTACATCAGCCACATAAATTTCTCCCTTTTTTGTTTATTGATTTCATTTATGGCAGAAAACTTCTTTGGTGACCATCATGATGGTAGAAGTATAAATGATGGTGGATCACGAGATACTTCTTTCAGGAGAGTTGATCCTGCATCTTCTGTTTCTGCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCTCCTCTGTCTATCAATAAAATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTGAGCGATTGGCATGTTGAGATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTTGAAGAAAAGGTGTCTGGCAATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAAATCGTAGACAATGACAGCAAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCCTCTATGTCAGAAGTAGCCAGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAATGCGTTGAGGATTGTGATTCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGTAAGAGCATAGACTCCACTGTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTGAGTGCAATGAAAGAACTATCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAAGCAAATATCTTTGATATGTTGCAGGTAATTCTTTTTATTTTGTGTTGTTTTTTTTATTCTACTCTCTATAGTTTGGTTGTTTCTGGAAAAATGTTTATATATGTGATCTGATTGTTAAGTTCAGCAATGGTTTTTTCTTCAGAATGTAATAGCAAGGTTTTGATTAAAGTTATGAGGGAAATTATATTGTTTGAAAATCAATAAGCTCTGTGCATTTCAGTTACCTGTATATATAAGTCCATTGCCAGATTAAACAAAAAGGGAAATTGATAATGACAATAGGCATCAACTCATACCAGTGATTGTCTTTTGCTATCCTCCATAATATCGTGTAGGAAAGAGCACTGCACAAGTCAATTATGTAATGAAAGTATAGGGGGGGTCCTAAATATTGTCCTAATTGCTTACTTTCTTTCACTGTGCAGCAATTCATGTCTAACTCAGTGGAGAACATGTCAGTATTAAGCATGAAAGTGCATAATTTGGAGAATGCTGTAGACAAAACTGTGTACACAATTACTCAAAGTGAAAGCCGCTATCACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACTTCTTCACCGAGGGTTTCTACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCACCACCAATTCCTCATTTGAAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGCTTAAACATGGGTGTAAAAGAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGAAAGCCTGGGGTTGTGAGATCGGAAAGTACTCTGGGAAGATATGTTCCAAGCTCAGCAAGGACTCGAGCATCAGGGGTTAAGGGACACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTGAGCTGCAAAATGCATTGCGTGCTTCTAAGGAATTTGATGGTAATGATGACATGGAGTCTGCATATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGATAGAACTGGACCTGTTCTTGAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTTATAGCTGGCCAGTTTCTGAATAAAAAAATGTTTGATTTGGCACTGCCTTGGCTTCAACAGGTAAGTTCACTTGTAGTCTATTAATGTTTCGCAATAACTGCTAATGCCAAGAAAGCTTATACGCTTTATTCATATTGTGGGTTTTATTGTTGTCCTAGGTAGCGGATTTGAGCATGATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAAAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCTGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTTTGTGAGGTTGCACCATGCAGGTAATCTACATTGTCCATTGAAAATGCCTGGATGCATCTCATCTGTTCTGTTACTTAATTTGAACATCTTTTCTCTCCTGTAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029272