BGIOSGA029279

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Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029279| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029279, complete gene.| tag = OJ1065_...")
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Gene Name

BGIOSGA029279

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029279, complete gene.

LocusTag

OJ1065_E04.12

Ensembl Transcript ID

BGIOSGA029279-TA

Ensembl Protein ID

BGIOSGA029279-PA

Length

5340

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21027877..21033216

Sequence Coding Region

21032845..21033216,21032705..21032764,21032528..21032604,21032348..21032405,21032174..21032257
,21032056..21032092,21031457..21031526,21031108..21031302,21030934..21031026
,21030595..21030823,21030417..21030500,21030197..21030348,21030023..21030119
,21029017..21029166,21028861..21028938,21028430..21028552,21028234..21028347
,21027877..21027957

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21027877..21033216 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21027877..21033216 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGCGCTGAGGCCGTCGGCGCTGGACCTGGTGGCGGCGCTGCTCACGGGGCGGGGACGACCGGAGGAGGAGGGGTGGCCGCCCTCGCTCGCCGAGAACCGCCACCTCCTCGTCCTGCTCACCACCTCCCTCGCCGTCCTCGTCGGCTGCGGCGTCGCGCTGCTCGTCCGCCGCTCCTCCATCTCCGCGCCCGCCGCGAGGGCGCAGGAGCCGCAGCCGCGGGCCCCCGCCCCCGCGAAGAGGAAGCAGGAGGCCGAGCCTGACCCCGACGACGGCAGGCAGAGGGTCGCCGTCTTCTTCGGCACGCAGACCGGCACAGCCGAGGGCTTCGCCAAGGCGCTTGCGGAGGAGGCCAAGTCGAGGTACGACAAGGCCGTCTTCAAGGTGCTCGATCTGGATGAGTATGCTGCGGATGATGAGGAGTATGAGCAGAAGCTTAAGAAGGAGATCATCGCCTTGTTCTTCGTGGCAACGTATGGGGATGGGGAACCAACTGACAATGCGGCGAGGTTCTATAAATGGTTTGGAGAGGGGAATGAGAGAGGTGAATGGTTGAGTAATCTTCGGTTTGGGGTCTTTGGCCTCGGAAATAGGCAGTACGAGCATTTTAACAAGGTTGGAAAGGTGGTTGACCAACTCCTCGCTGAACAAGGTGGAAAACGCATTGTTCCTCTTGGTCTTGGAGATGATGATCAATGCATTGAGGATGACTTCAATGCATGGAAGGAACTTCTATGGCCAGAATTGGATAAATTGCTCCGTGTTGAAGATGATAAATCGGCAGCACCAACTCCCTACACAGCTGCTATTCCTGAATATAGAGTTGTATTGGTCAAGCCAGAGGAAGCCATGCATATCAACAAATCCTTTAGTCTCAGTAATGGTCATGCTGTATATGACATTCAGCATCCTTGCAGAGCAAATGTGGCTGTGCGGCGGGAGCTTCACACGCCGGCTTCTGACCGGTCCTGCATTCATTTAGAGTTTGATATTTCAGGGACTGGTCTTACATATGAGACTGGAGATCATGTTGGTGTATATGCAGAAAACTGCACAGAGACTGTAGAGGAGGTAGAAAATCTGTTAGGTTATTCACCAGATACCTTATTCTCAATTCATGCTGACCAAGAGGATGGCACTCCACTTTTTGGGGGTTCTTTGCCACCTCCTTTCCCATCCCCCTGTACTGTGAGGACTGCACTTGCCAGATATGCTGACCTTCTGAGTTTTCCTAAGAAGAGTGCTTTAATTGCTTTGGCTTCCCATGCGTCTGATCCCAAAGATGCTGAGAGGCTAAGACATCTAGCATCTCCTGCTGGAAAGAAGGAGTATTCTCAATGGATAGTTTCAAGTCAACGGAGTCTCTTGGAAGTTATGACAGAGTTCCCATCAGCAAAGCCTCCACTTGGTGTCTTCTTTGCAGCCATTGCTCCTCGACTGCAGCCGAGATACTACTCGATATCTTCCTCACCGAGGATGACTCCAACAAGAATTCATGTAACATGTGCGCTAGTGTATGGGCAAACCCCTACTGGAAGGATCCATAAAGGAGTTTGTTCTACTTGGATGAAGAACTCGATTCCCTTGGAAGAGAGCCAAGAATGTAGCTGGGCTCCAATTTTTGTTAGGCAGTCAAACTTCAAACTGCCTACTGATCCTACTGTGCCTATTATAATGATAGGTCCTGGAACTGGTCTTGCACCTTTTAGGGGCTTCTTACAGGAAAGATTAGCTCTAAAAGAGACTGGTGTGGAACTAGGCCATGCCGTCCTATTCTTTGGGTGCAGAAATCGAAAGATGGACTTCATATATGAGGATGAGCTCAACAATTTTGTTGAGACCGGTGCGCTGTCTGAATTGATTGTAGCCTTTTCTCGTGAGGGTCCTTCAAAGGAGTATGTTCAGCACAAAATGGCAGAGAAGGCTCCCGAGATTTGGAGCATCATTTCTCCGGGTGGTTATATTTATGTCTGTGGTGATGCAAAGGGCATGGCAAGAGATGTACACCGCACACTACACACCATTGTGCAGGAACAGGGTTCTTTGGACAACTCAAACACAGAAAGCTATGTAAAGAGCTTGCAGATGGAAGGGAGATACTTGAGAGATGTCTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MDSGGGGGGGGGAALRPSALDLVAALLTGRGRPEEEGWPPSLAENRHLLVLLTTSLAVLVGCGVALLVRRSSISAPAARAQEPQPRAPAPAKRKQEAEPDPDDGRQRVAVFFGTQTGTAEGFAKALAEEAKSRYDKAVFKVLDLDEYAADDEEYEQKLKKEIIALFFVATYGDGEPTDNAARFYKWFGEGNERGEWLSNLRFGVFGLGNRQYEHFNKVGKVVDQLLAEQGGKRIVPLGLGDDDQCIEDDFNAWKELLWPELDKLLRVEDDKSAAPTPYTAAIPEYRVVLVKPEEAMHINKSFSLSNGHAVYDIQHPCRANVAVRRELHTPASDRSCIHLEFDISGTGLTYETGDHVGVYAENCTETVEEVENLLGYSPDTLFSIHADQEDGTPLFGGSLPPPFPSPCTVRTALARYADLLSFPKKSALIALASHASDPKDAERLRHLASPAGKKEYSQWIVSSQRSLLEVMTEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRMTPTRIHVTCALVYGQTPTGRIHKGVCSTWMKNSIPLEESQECSWAPIFVRQSNFKLPTDPTVPIIMIGPGTGLAPFRGFLQERLALKETGVELGHAVLFFGCRNRKMDFIYEDELNNFVETGALSELIVAFSREGPSKEYVQHKMAEKAPEIWSIISPGGYIYVCGDAKGMARDVHRTLHTIVQEQGSLDNSNTESYVKSLQMEGRYLRDVW</aaseq>

Gene Sequence

<dnaseqindica>1..372#453..512#613..689#812..869#960..1043#1125..1161#1691..1760#1915..2109#2191..2283#2394..2622#2717..2800#2869..3020#3098..3194#4051..4200#4279..4356#4665..4787#4870..4983#5260..5340#ATGGACTCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGCGCTGAGGCCGTCGGCGCTGGACCTGGTGGCGGCGCTGCTCACGGGGCGGGGACGACCGGAGGAGGAGGGGTGGCCGCCCTCGCTCGCCGAGAACCGCCACCTCCTCGTCCTGCTCACCACCTCCCTCGCCGTCCTCGTCGGCTGCGGCGTCGCGCTGCTCGTCCGCCGCTCCTCCATCTCCGCGCCCGCCGCGAGGGCGCAGGAGCCGCAGCCGCGGGCCCCCGCCCCCGCGAAGAGGAAGCAGGAGGCCGAGCCTGACCCCGACGACGGCAGGCAGAGGGTCGCCGTCTTCTTCGGCACGCAGACCGGCACAGCCGAGGGCTTCGCCAAGGTTGGATAGATTTTCTCGCTCTCTGTCTGTCACCTCTCGTGCAGCAAAACCCTGGGTCTTAATTGGTTGCGGATTCGCAGGCGCTTGCGGAGGAGGCCAAGTCGAGGTACGACAAGGCCGTCTTCAAGGTGCTCGATCTGGTAAGCCGCCACGATTTGCCACTAACGCTGCTTCAGAATTTCATGTGCTTTTGCATTCTATGTATTGATTGATTCATGCCTGTTTCGTTCTGGGGTTCAGGATGAGTATGCTGCGGATGATGAGGAGTATGAGCAGAAGCTTAAGAAGGAGATCATCGCCTTGTTCTTCGTGGCAACGTAGGTGCCATCTCCACTTTTTACTATACTTCTGACGGGATATTGATTAATTCAGGAGAAACTAGAATGGTTGAATTTTGATTCCAATGAATATCTGAGTTGCATTCTTGTTATCGTTGAAGGTATGGGGATGGGGAACCAACTGACAATGCGGCGAGGTTCTATAAATGGTTTGGAGAGGTTTGCTCTCAAATCCACAGTTCATATGGCCCTTTCATGGGTGAGCGTTGTATTTTCTGTTGACGGCCTGTTTGTTTGGCTGGAGTGCAGGGGAATGAGAGAGGTGAATGGTTGAGTAATCTTCGGTTTGGGGTCTTTGGCCTCGGAAATAGGCAGTACGAGCATTTTAACAAGGTTTGCTGGTGCTTCTACATTGATATTGTGCTTTTATATAGAGCCCAATTTGTATACTTACATTGTCTTTTTAAACTGAAGGTTGGAAAGGTGGTTGACCAACTCCTCGCTGAACAAGGTAACCATCGTTCGAATAACTAAAATGCACTATTTTTTTCATCTATATTACAAAGGCATAACTTTGCCTGTACTGTTCATGCTCACCTAAGAATTGTATGCCACTAAACATTGTCAGAAATTATACTATATGAGAAGAGTACAGGATAAGGGATACAACTTATCTAATCTTTTTATGTAGGTAGTTAGTAACGTGCTCTGGAAAGCATCATAATTTTATCAGGGTGGTTTGCTACTAGGATCATATGCTTTAAGACTTTAATGCTGTGCCTTTTTTGTCTTCATCCTTTTCTGTCTACCGATATTCTGTAGAGTGTTTTAGACTCAGAAGGGGAGCTAGTATTAATGTAGTGTAAGTGTGCAACTAAATCAAATCGGACTTGTCTCCGATAGATCTGAACAACAGGTTTACCATGTAATAATTCAGTGAGATATTGTTGATCTTTGCAACATTCTGGTCACATGATTTTCCCGTCTGTCGTGTTCTGTATCATTTGGTGGTGGTTAACTTTTCTCCACATCTCTTTTAGGTGGAAAACGCATTGTTCCTCTTGGTCTTGGAGATGATGATCAATGCATTGAGGATGACTTCAATGCATGGTACGTACCGTAATTAGCTTAGTCTTTGTCTCAACTTTGAACTCAGGCATCATTTTGACACTGATTCTATTTGTGCACACTTTTTAAACATTGATATCAACTTTAGACTTTGAGACATAAAACAAAAGCTAATGCTTTGGTTGTTCAACTAAAGGAAGGAACTTCTATGGCCAGAATTGGATAAATTGCTCCGTGTTGAAGATGATAAATCGGCAGCACCAACTCCCTACACAGCTGCTATTCCTGAATATAGAGTTGTATTGGTCAAGCCAGAGGAAGCCATGCATATCAACAAATCCTTTAGTCTCAGTAATGGTCATGCTGTATATGACATTCAGCATCCTTGCAGGTATGAGATTATTTCTTTAATTTGACTGCACTGGGACACTGGGTGTGGTCTGAACAAATTCTGATCATGCTTTCCTTGCAGAGCAAATGTGGCTGTGCGGCGGGAGCTTCACACGCCGGCTTCTGACCGGTCCTGCATTCATTTAGAGTTTGATATTTCAGGGACTGGTCTTACGTAAGTATCTGAATTTGTTACTTTCCAAATTTAGTAGTTGGTTGACAAAATTGCAGGCACGGTTTTCTTACTGGTGTTTAGACTGCTGATGACCCCTATTTTCTTAACAGATATGAGACTGGAGATCATGTTGGTGTATATGCAGAAAACTGCACAGAGACTGTAGAGGAGGTAGAAAATCTGTTAGGTTATTCACCAGATACCTTATTCTCAATTCATGCTGACCAAGAGGATGGCACTCCACTTTTTGGGGGTTCTTTGCCACCTCCTTTCCCATCCCCCTGTACTGTGAGGACTGCACTTGCCAGATATGCTGACCTTCTGAGTTTTCCTAAGAAGGTGAACTTTTGCAGATCTATCTTGTTACATTCTATATGCATTTTTTTTCTGGATATTTGTATTGATGTTAATATTTTTTAATTTGTTGATGCAGAGTGCTTTAATTGCTTTGGCTTCCCATGCGTCTGATCCCAAAGATGCTGAGAGGCTAAGACATCTAGCATCTCCTGCTGGAAAGGTTGGTTTTTAATATAAGTTTATGCTTTTGGATGTTCGTTTTGGCTTCACATGAGCTTCATTTGGCAGAAGGAGTATTCTCAATGGATAGTTTCAAGTCAACGGAGTCTCTTGGAAGTTATGACAGAGTTCCCATCAGCAAAGCCTCCACTTGGTGTCTTCTTTGCAGCCATTGCTCCTCGACTGCAGCCGAGATACTACTCGATATCTTCCTCACCGAGGTACCTTGGTCAGGAATAATACCCTTCTAACCTGAGCAAATTGACCTATCTATTTAAAACCATTCACATTGCTGCAGGATGACTCCAACAAGAATTCATGTAACATGTGCGCTAGTGTATGGGCAAACCCCTACTGGAAGGATCCATAAAGGAGTTTGTTCTACTTGGATGAAGGTAAGCCCTTGTTCTATCATAGTGAAAGGGCACTCTGTTTCAATATTATAGTCACTGTGCTTTCTGCATTTCTTTTGGATGATTGGTAGATAATTGAATATGACCGTCATAGCTCGCTTTGATGCTTATATATCAAGATCCAGTCTTCATTACATGTGTCCAACTTTAACTGGTTAAGTGAACCTGTTTCTTACCCACTTTAAAAACTCCACGTGAATCATAATTTCTCAAGTTTCTTGATGTATGGACAAAGTGTCAGGTTAACAGTTCTCATGATGAACTTACCGTGATGGCCTTGCCAATAACACTAAACAACTCATTCTATTCAGTAACGCAACCTTGTATCACTCCCTGAAAATTCTATAGTTATATAGTAACTCCATCCGTTTCATATTATAAGTCGTTTTGACTTTTTTCTTAGTCAAACTTTTTTTAAGTTTGACCAATTTTATAAGAAAATATAGCAACATTTCCAACAAGAAAAACATATTATCAAAATATATTCAATGTTACATTTGATGAAACTAATTTGGTGTTGTATATGTTGCTAATTTTTTCTATAAACTTAGTTAAACCTAAAGAAGTTAGTTTGACTAGAAAAAAAGTCAAAGTGACTTGTAATATGAAACGGAGGGAGTGCATCTTTCCCTCAGCAATATGAAAGACTTCGAAAAGTTCTTGATACATATATTCTGTAGTTGTCGATTTGTTTCATATATAATGAGAGTTTATATTTTCGAAGGAGAACACTTTGAAAACAATGGTCATACATTTGGTCAAGCATAAAAACTTTGTTTGAAGTATGTGATGGTCGTGCTGACCAGTAAACATTTTAATCTGATGATTGTGTATGCAGAACTCGATTCCCTTGGAAGAGAGCCAAGAATGTAGCTGGGCTCCAATTTTTGTTAGGCAGTCAAACTTCAAACTGCCTACTGATCCTACTGTGCCTATTATAATGATAGGTCCTGGAACTGGTCTTGCACCTTTTAGGGGCTTCTTACAGGTTTGTTTTTCCTCCCCCTTTCCTCAAATATTGACTCTTATAATTCAATTGATTATATTATGCATTTGGCACTGGCAGGAAAGATTAGCTCTAAAAGAGACTGGTGTGGAACTAGGCCATGCCGTCCTATTCTTTGGGTGCAGAAATCGAAAGATGGTATGACATACATTCCTACTTTATTCATATTCATATGCAGTTTGTACTTAGAAAACTTTACAATATACGAAATCTGTTGGTCATAGGTATTCTTATAAATCTTAGTAATTAAAAATATCAACACATCTGCCATTGATGTTGCACAATGTGGTTATGCACATATGTGCTTTGTCAGAGCTCTCCTTGTCTTTCAGAAAACTTTTCTGCATTGTAGTTTGAGTGTAGGAGAGTATCTTATTGGTGATTGGCAATTAGAAAACTTCCTAGCCTCTTAAATAACTCCCCTCACCAGTATTTTCTCTGTTCAGGACTTCATATATGAGGATGAGCTCAACAATTTTGTTGAGACCGGTGCGCTGTCTGAATTGATTGTAGCCTTTTCTCGTGAGGGTCCTTCAAAGGAGTATGTTCAGCACAAAATGGCAGAGAAGGTACATGAAATGATCCTTTTTGTTTAATATAAGGTGTAGTGTTTTATTACCCTTTTTCACCATTGCTTTGTAATATTCCCAGGCTCCCGAGATTTGGAGCATCATTTCTCCGGGTGGTTATATTTATGTCTGTGGTGATGCAAAGGGCATGGCAAGAGATGTACACCGCACACTACACACCATTGTGCAGGAACAGGTATTGTTTGGGTATATCATTACCTTTGGTACCTGTTAGATTCAGTTAATTCTTAGTGGGAGGATGCAGTGGTGCTCTACCTCTAGAAAGTTTGCACTTTCTTGATTGAGGTCAAAACAAATCCAGAACTCTGTCCCTTAGTATTTATCACCTAGCCTAGCCTCTTTCTAAGCAGGCATTATGAGTAATTGTGTGAAGTGCCATGAAAGCTCTTTAGAGTTTAACAGTAGCTTTGCTTTCATCTCCACTTTGCTGAATGTTACCTTGAATTTTCAGGGTTCTTTGGACAACTCAAACACAGAAAGCTATGTAAAGAGCTTGCAGATGGAAGGGAGATACTTGAGAGATGTCTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029279