BGIOSGA029287

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Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029287| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029287, complete gene.| tag = OS09G05...")
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Gene Name

BGIOSGA029287

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029287, complete gene.

LocusTag

OS09G0556500

Ensembl Transcript ID

BGIOSGA029287-TA

Ensembl Protein ID

BGIOSGA029287-PA

Length

5280

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20928351..20933630

Sequence Coding Region

20933263..20933630,20932531..20932594,20931965..20932126,20931345..20931515,20930918..20931199
,20930718..20930843,20929629..20929829,20929394..20929495,20928351..20928584

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20928351..20933630 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20928351..20933630 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGAGGCGCGCCGCTGGCCTCCTCCCTCTCCTCCTCTCCTCGCCGTCGCGAGCTCGCCTACCGCACCGCCAAGCGCTTGCCCTGACCCCTCCTCTGCTTCGCCCCCACCGCCTCTACTCCCACTCCCCCAAGCCCTCGTCGTCCGCCGCGTTTTCCGCCTCCGCCTCCGCCTCGAATGGCGCGCCTGCGGGGAGAGCCCGGGAGCTGCACCTCTACAACACCAAGTCGCGGAGGAAGGAGCTCTTCCAGCCCCGGGTGCCCGGCGGGGAGGTCGGCATGTACGTCTGCGGCGTCACCCCCTACGACGACAGCCACATCGGCCACGCCCGCGCCTACGTCGCCTTCGACGTCCTCTACAGGTACTTGCGTTATTTGGACCATAAAGTGCGCTATGTTCGGAATTTTACTGACATTGATGACAAGATAATTGCAAGAGCAAATCAATTGGGAGAAGATCCTTTTAGCTTAAGCAAAAGGTACTCTGATGACTTCCTATCAGACATGGCTAATCTTCATTGTTTACCACCATCTGTGGAGCCTCGCGTTTCAGACCACATTGATCAGATTATAAACATGATTAAACAGATCATTGATAATGATTGTGCATATGCAATTGGCGGGGATGTTTATTTCTCTGTTGAAAATTTCCCTGAATATGGGGATTTATCTGGTCGAAAATTAGATGATAATAGAGCTGGTGAAAGGGTTGCTGTTGATGAGAGGAAGAAGAACCCAGCTGATTTTGCTCTTTGGAAGGCTGCAAAAGATGGGGAGCCATCTTGGGATAGCCCTTGGGGCCCTGGAAGGCCAGGATGGCACATAGAATGCAGTGCTATGAGTGCACATTACTTGGGCCACTCTTTCGACATACATGGCGGTGGGGAGGACCTGATCTTTCCACACCATGAAAATGAAATTGCTCAGAGCCGTGCAGCATGTTGTGACAGCAGCATAAATTACTGGATACACAATGGCTTTGTCAATGTAAACAGCCAGAAAATGTCAAAATCGCTGGGCAACTTTGTCACTATACGCAAAGTTACGGAACTGTACCACCCACTTGCTTTGAGGATGTTTTTACTTGGTACACACTACAGGTCCCCGATCAACTATACCATAGAACAGCTTAATGTTGCATCAGACAGACTGTACTACACTTACCAGACACTACAAGATTGTGAAGAAAGTTGTCAACAGCACCAAAGCAAGGCTGGAGATCCATTACCTGTTAATACTACAAATTGTATCCAGAAGCTCCATGATGAATTTGAGACTTCAATGTCTGATGATCTTCACACTTCAGTAGCACTGGCTGCTATTTCTGAGCCATTAAAAGTTATGAATGACTTGCTGCATACTCGTAAGGGAAAGAAGCAGGAAAAACGGTTGGAATCACTTTCTGCTATGGAAGAGAAAATAAGGATGGTGCTTTCTGTCCTAGGGCTACTACCATCAAGCTATTATGAGGCTCTGCAGCAGCTGCGGGAAAAAGCACTAAGAAGAGCTTCCATGACAGAGGAGCAGGTGCTTCAGAAAATTGAAGAAAGGACTTCAGCAAGAAAGGCAAAACAGTATGAAAAATCCGATGAAATCAGAAAAGAATTGGCTGCTGTTGGAATTGCCCTCATGGACGGTCCTGACGGAACAACTTGGAGGCCATCTGTACCTCTTTCTGAGCAAGGGGTGGTTGCCAGTACATGA</cdnaseq>

Protein Sequence

<aaseq>MAAARRAAGLLPLLLSSPSRARLPHRQALALTPPLLRPHRLYSHSPKPSSSAAFSASASASNGAPAGRARELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLDHKVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSAMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQGVVAST</aaseq>

Gene Sequence

<dnaseqindica>1..368#1037..1100#1505..1666#2116..2286#2432..2713#2788..2913#3802..4002#4136..4237#5047..5280#ATGGCGGCGGCGAGGCGCGCCGCTGGCCTCCTCCCTCTCCTCCTCTCCTCGCCGTCGCGAGCTCGCCTACCGCACCGCCAAGCGCTTGCCCTGACCCCTCCTCTGCTTCGCCCCCACCGCCTCTACTCCCACTCCCCCAAGCCCTCGTCGTCCGCCGCGTTTTCCGCCTCCGCCTCCGCCTCGAATGGCGCGCCTGCGGGGAGAGCCCGGGAGCTGCACCTCTACAACACCAAGTCGCGGAGGAAGGAGCTCTTCCAGCCCCGGGTGCCCGGCGGGGAGGTCGGCATGTACGTCTGCGGCGTCACCCCCTACGACGACAGCCACATCGGCCACGCCCGCGCCTACGTCGCCTTCGACGTCCTCTACAGGTTCCCCCTAGCTTCATTCTTCTCCGGATTTGGTCCCGTTGGTGAATTGCGTGCTCTAGTGATAGTGATGTTGACTGTGCTGTGCAATTGACTCACCCAATGCGGCGTTATGTACTTAATTAGTTATATGGATGTGTCAACAAATGTACACCGACTTAATAGCAGTATTCTATACATGGAGAAATGAGGAGACATGTTTATAGCAGTAAGTGCATTGCAAAATTACACAATGTATTATGTACATTCACAATTTGTTTGTGGACACACTGTGAGAAACATTTTGCGCTCTAAATAGCTCGGTTTAGGATGTTCTGACATTAGAACTACAGCAAACTGTTATGGTAGTTGCGTGCGAAATGATCCTAACTCTTCCCTTAGCAACAGATCTGCCGGAAACAGAAAAGGTACTCTGGGAATGGTTGTTAATTTGTTATGACGTTAGGAAAACAAGCCAATTCACTGTTGCATCTCAATTAGCTAAGCATAACGGAGCAACTCAACCATCATACCCAGGAACAATTTCACACCCTGAATCCGGCCATATTCCTTTATGGTCTTTTTATTCACATTCAGCACACTCTTACCATGTTGTCTTGTCTTATTTTCCTCTCCTGCTAGAAAGTACCATACGGTCATATGCTTATCTCATGTATCATGATATCTGGCAGGTACTTGCGTTATTTGGACCATAAAGTGCGCTATGTTCGGAATTTTACTGACATTGATGACAAGGTGATTTATGGGTCAAATTTATTTTCAAACAAGTGATGCTGGTCCTCATTATCTGAAAGCTAAATTTAATGTAAACAAGGAATCGTATTGTATTTATTTATGCTACAGTTATTCTACCTGTTCATCTTCTATAGTTAGAAGTCATTATATCCATACCTTTAATATGGAGAAAACGTGTCATGTTGACCAGTTGAAGTAGAGTAGACCAAGGTCATGTTTGATTCATATTGCAACCAATGTTGTGTTTGTTTCAGATTAATACCTGAATTTAACTTCAAATTTGTTTCAATATATTTACCTCCCTCATTATATTAAGCTATTTTGCTTGAAACCTAGAAAGAAAATTTATATGCCAATTGCTAATCTGCACAGGATACCTGAGTTGCACTTCTGGAATTCTGTAGATAATTGCAAGAGCAAATCAATTGGGAGAAGATCCTTTTAGCTTAAGCAAAAGGTACTCTGATGACTTCCTATCAGACATGGCTAATCTTCATTGTTTACCACCATCTGTGGAGCCTCGCGTTTCAGACCACATTGATCAGATTATAAACATGATTAAACAGGTAAAATATGCATGCAGTATGGATCATTGGTGTTTTTCCTATGGTGCTTAATTTTTATTATTATGCAGTTCTTTCTGTTGTTCTCCTATTAAATCCACCATTTCGTGTAATAGGCAGTGAAAGTTCCTTATTTTGACTACTACTATCTAGAAAGAGATGATTCATCACACACCATTAAATCGATACCTGATAATGTGTTGCTTTCTTTCATTGTTAATGCATCATAGGATCCGTGTACAGAGAACATCCAATTCCAAATTATAAATTTGCAATTTGTTATTAAGAATGGTAAGCATGTAAAATATGAAAATGATTGTTATCACATATATGCAGTTACGAACAGTTGCACCTGATTGACAATATTGTGCTGCTATTGAATTCTCTGTGCAATATAATTGTTTTATGTGCTGCCCAGCTTGATGTTTTATCTATGACATTTCTTGGAACAGATCATTGATAATGATTGTGCATATGCAATTGGCGGGGATGTTTATTTCTCTGTTGAAAATTTCCCTGAATATGGGGATTTATCTGGTCGAAAATTAGATGATAATAGAGCTGGTGAAAGGGTTGCTGTTGATGAGAGGAAGAAGAACCCAGCTGATTTTGCTCTTTGGAAGGTATGTCTTGTTCTCAATTTGTAGATTTCTTCTATTTTTTGTGTATCTATTATGTACTCTTGTTCTATGAGGAAATTATTTATTTTAATTTCAAGATTTCTTTAGAGAGTTCAGTTTCAAATTAGCTGATTTTATGTTTCTCCAGGCTGCAAAAGATGGGGAGCCATCTTGGGATAGCCCTTGGGGCCCTGGAAGGCCAGGATGGCACATAGAATGCAGTGCTATGAGTGCACATTACTTGGGCCACTCTTTCGACATACATGGCGGTGGGGAGGACCTGATCTTTCCACACCATGAAAATGAAATTGCTCAGAGCCGTGCAGCATGTTGTGACAGCAGCATAAATTACTGGATACACAATGGCTTTGTCAATGTAAACAGCCAGAAAATGTCAAAATCGCTGGGCAACTTTGTCACTATACGCAAAGTAAGACAATATAACTTTCATTTTTTGTCTAATCGTTGCGCTTTATCTTTCTCAAAGATTTCCAACTTTCTCAGGTTACGGAACTGTACCACCCACTTGCTTTGAGGATGTTTTTACTTGGTACACACTACAGGTCCCCGATCAACTATACCATAGAACAGCTTAATGTTGCATCAGACAGACTGTACTACACTTACCAGGTATATTATATCTTCTTATATCCATGTTAGTTTTACTAACCTTATGCTTTATTTCTACCAGCAAAACAGTCGGGCCAGACCTTGGGGTGGTGGAAAGATGATCCTGAGCCTATTTGGCTTCTAGGACTTATTCAGGCCTTTGTACTTTGGCTTGCCTTGTTAAAAGCATCTGTAAATTCACATTCCAAAAGTGTCTATGCTACTATAAAAACTAAAGAGGGAATGACAATGGACCTTAAATTGGCATGCATGAATTAGTAACATTACTTAATTTTTTTTGTGAGAACAAGTGTAGGTTATGTTTATGCCAAGGCATTTACAAGATTAAGATACACATTTAGTCTATAGATATATTAATTAATGAACCATATTTTTATCTTTTGAAAGCCAAATATATCATTATTCAGATGGCCTGTGTGTCTGTGACCATGATTCATTCCTTAACCCCATACAACTTGCTATCTGCACTTGTCTTGGCTAAGCTGCAGTACTCCAAATAAAAGTTGGTTCGCTTAAATTGAAATGTCCATTGAACTTTTTTTTTTTGTCTTAGCTGATTAAAAACTGGTTGTGAATTGGCCCGAAATTTAGAATCACAGGGTAGCACTGAATTCATCTTAGTATAGCTATAGTTGCACGCATGGTCTGACCAGGCAGCCCTGGCTTTTGCTGCTTCTCAATCTCTAGCCAAAGCAAGATCACTTAAGTTCTGGTTTAACCTTTATGCCTGGAGACTGGGAAGCTGCTTCAATTTGAATGACTAGTCAGAACTTTTGAGTTTTGGTGGCACTGAAAGGGAGATGCTGCATTTTTGCTGTTTCTTCAGGAGATATTTCAATGCCATAACTCTTAATTAAAGAGTTTATGTTTTTTGTTTTTAATTTACAGACACTACAAGATTGTGAAGAAAGTTGTCAACAGCACCAAAGCAAGGCTGGAGATCCATTACCTGTTAATACTACAAATTGTATCCAGAAGCTCCATGATGAATTTGAGACTTCAATGTCTGATGATCTTCACACTTCAGTAGCACTGGCTGCTATTTCTGAGCCATTAAAAGTTATGAATGACTTGCTGCATACTCGTAAGGTAAATCGAATGAAAACCTTGTGGAGATACAGTTAGTGACTTTCAGGGATCTATGATTTGATCTGCTCGCACGCCACAAGTAAAATACTAAAATCATACCTAATGTTTCGATCTTTCTCTGATGTTTGAGCAGGGAAAGAAGCAGGAAAAACGGTTGGAATCACTTTCTGCTATGGAAGAGAAAATAAGGATGGTGCTTTCTGTCCTAGGGCTACTACCATCAAGCTATTATGAGGTGAGTGCTATGTAACATAGCCTATGTTTTATCAACTCTGCCCAAGCAGTTTGAATATATTTTGTTGTCTGTTGAAGAACACACTTTGTTTCTTTCCTCTGTGAATATGCATTGTCTGTCCTGATACGATCACTTGTATAGCCCATCTCCTGTATTTTGTTGTCATAGACATTATGGTATTCAATAAACCAAGGTTCAGAAAGTCACAGTTTACTGTCCGGTGACAAGTTGAGAAAACCACACCAGCAGGCCGTTTTATTAAACCTTGTCTTCTAGGGTATATTCCACCCCCTTAAACTCCACGCAATGTCTACTCAAGTATCCGACCTCAAATATGCAAAATCAAGATATTCAAATTTTATATCTTAAAGAACCAACCAGTACAACCTGTTTTTTTGCTAACAAATGGAACTGGATTCCTGCCATTTTCTTTTCCTGTTTTGTTAAGTTCCTGTTTCCAGAAAGTAAAAGGCAATAGAGGGTCAGGTTTGGTTTACCACTCAGCCTTATTCAAGTTTGAGCTTCAACTGTCATACTATTGAATAGCCAGGACAAATGTATCTCTTCAAAACTTGTGTTTCCTTTGGAAATGAAAGAGATACTGTGGTAACCACTGTTATAGGTGCTTAATTAATGTATCCGTGCCCAGAACAGGGCAGCTAGCGCAATCAAATTCCAACACGGTATTTAAGTTGTACTTTCCATAGGCACTCTGTTTATTATAATTCTACTCTAGTAAACATGACTGTGAGTAGCCAAACCTTTTCTCCTTCACACACCGGACATCACTAACAATTCTCTGTTCTCAGGCTCTGCAGCAGCTGCGGGAAAAAGCACTAAGAAGAGCTTCCATGACAGAGGAGCAGGTGCTTCAGAAAATTGAAGAAAGGACTTCAGCAAGAAAGGCAAAACAGTATGAAAAATCCGATGAAATCAGAAAAGAATTGGCTGCTGTTGGAATTGCCCTCATGGACGGTCCTGACGGAACAACTTGGAGGCCATCTGTACCTCTTTCTGAGCAAGGGGTGGTTGCCAGTACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029287