BGIOSGA029292

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Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029292| Description = Os09g0555700 proteincDNA clone:J033029F02, full| Definition = Oryza sativa Indica Group BGIOSGA029292, complete gene.|...")
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Gene Name

BGIOSGA029292

Description

Os09g0555700 proteincDNA clone:J033029F02, full

Definition

Oryza sativa Indica Group BGIOSGA029292, complete gene.

LocusTag

OS09G0555700

Ensembl Transcript ID

BGIOSGA029292-TA

Ensembl Protein ID

BGIOSGA029292-PA

Length

5015

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20874577..20879591

Sequence Coding Region

20879417..20879591,20878932..20879328,20874577..20875618

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20874577..20879591 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20874577..20879591 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCCTCGTCCGCACCCTTCTTTGGGCTCGGCGACACGCAGATGCCGCCGCCGCAGAATCCCACCAATCCAGCCCTCCACCACCACCCCAACCCCTCCCCCGCTCCCGTCGCCGCCGCCGCGCCCGCGCCGAAGAAGAAGAGGAACCAGCCTGGAAACCCAAGCAAGTATCCAGATGCGGAGGTGATAGCGCTGTCGCCGCGGACGCTGATGGCGACCAACAGGTTCGTGTGCGAGGTGTGCAACAAGGGGTTCCAGCGGGAGCAGAACCTGCAGCTGCACCGGCGAGGGCACAACCTGCCGTGGAAGCTGAAGCAGAAGAACCCCAAGGAGGCTCGCCGGCGCGTGTACCTGTGCCCGGAGCCGTCGTGCGTCCACCACGACCCGTCGCGGGCCCTCGGCGACCTCACCGGGATCAAGAAGCACTACTGCCGCAAGCACGGCGAGAAGAAGTGGCGCTGCGACAAGTGCTCCAAGCGCTACGCCGTGCAGTCCGACTGGAAGGCCCACTCCAAGACCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCAGGAGGGACAGCTTCATCACCCACCGCGCCTTCTGCGACGCGCTGGCGCAGGAGAACGCGCGCATGCCGCCCATCGGCGCCGGCGTATACGGCGGCGCCGGCAACATGACACTTGGGCTCACCGGCATGGCCGCCCCGCAACTTCCCGCCGGCTTCCCTGATCAGGCCGGCCAGCCGTCGGCGTCGGCCGGCGATGTCCTCCGCCTCGGCGGCGGCAGCAATGGCGCCTCTCAGTTTGATCACCTCATGGCCTCGTCGTCGGGCTCCTCCATGTTCCGCTCGCAGGGATCGTCGTCCTCCTCGTTCTACCTCGCCAATGGCGCCGCCCATCATGCTCCCGCTCAGGACTTCGGCCCGGAGGACGGCCAGTCTCAGGCCGGCCAGGGCTCGCTGCTCCACGGCAAGCCGGCGGCGTTCCATGACCTGATGCAGCTCCCCGTGCAGCACCAGCAAAGCGGCAATGGTAACCTCCTCAACCTTGGCTTCTTCTCCGGCAGCAATGGCGGCGTCGACCAGTTCAACGGCGGCGCTGGAAACGGCGGGCAGGGCAGCATCGTTACTTCTAGCGGCCTCGCCGGCAACCACGGCGGCGGCGGCGGCGTCTTCCCTTCTCTGTACAACTCGTCCGAACCGGCCGGTACACTGCCGCAGATGTCGGCGACGGCGCTCTTGCAGAAGGCTGCACAGATGGGTGCAACGACGAGCAGCTACAACGCCGGCGGCGCCGGTGGCGCGAGCTCGCTGCTCCGTGGAGCTAGCTCCCACGGGATCAGCGCCGGTGAAGGGCCGGCCAACGAGAGGGCGTCGTACCAGAATCTCATCATGGGCTCCATGGCGAGCGGCGGCGGCGGCGCGGGTTTCGCCGGTAGCTTCTCCGGCGCGTCTGGATTCGGTGGCGCCGTCGACGACGGCAAGCTGAGCACGAGGGACTTCCTCGGCGTCGGCGTCGTCCAGGGCATCAGCGGCTCGGCGGCAATGGGGCCGCCGCGCCATGGCGCGGCTGGCCTCCACGTCGGCTCACTGGACCCGGCAAACATGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAAASSAPFFGLGDTQMPPPQNPTNPALHHHPNPSPAPVAAAAPAPKKKRNQPGNPSKYPDAEVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPSCVHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQENARMPPIGAGVYGGAGNMTLGLTGMAAPQLPAGFPDQAGQPSASAGDVLRLGGGSNGASQFDHLMASSSGSSMFRSQGSSSSSFYLANGAAHHAPAQDFGPEDGQSQAGQGSLLHGKPAAFHDLMQLPVQHQQSGNGNLLNLGFFSGSNGGVDQFNGGAGNGGQGSIVTSSGLAGNHGGGGGVFPSLYNSSEPAGTLPQMSATALLQKAAQMGATTSSYNAGGAGGASSLLRGASSHGISAGEGPANERASYQNLIMGSMASGGGGAGFAGSFSGASGFGGAVDDGKLSTRDFLGVGVVQGISGSAAMGPPRHGAAGLHVGSLDPANMN</aaseq>

Gene Sequence

<dnaseqindica>1..175#264..660#3974..5015#ATGGCGGCCGCCTCGTCCGCACCCTTCTTTGGGCTCGGCGACACGCAGATGCCGCCGCCGCAGAATCCCACCAATCCAGCCCTCCACCACCACCCCAACCCCTCCCCCGCTCCCGTCGCCGCCGCCGCGCCCGCGCCGAAGAAGAAGAGGAACCAGCCTGGAAACCCAAGCAAGTGTTCTTTCTTGATCGATTGATTTCCCCTTTCTTCTTCGTTCGATTGTATCGTGTTAAAATTAATCAGTTGTCGATTCTTCTCGTGCAGATCCAGATGCGGAGGTGATAGCGCTGTCGCCGCGGACGCTGATGGCGACCAACAGGTTCGTGTGCGAGGTGTGCAACAAGGGGTTCCAGCGGGAGCAGAACCTGCAGCTGCACCGGCGAGGGCACAACCTGCCGTGGAAGCTGAAGCAGAAGAACCCCAAGGAGGCTCGCCGGCGCGTGTACCTGTGCCCGGAGCCGTCGTGCGTCCACCACGACCCGTCGCGGGCCCTCGGCGACCTCACCGGGATCAAGAAGCACTACTGCCGCAAGCACGGCGAGAAGAAGTGGCGCTGCGACAAGTGCTCCAAGCGCTACGCCGTGCAGTCCGACTGGAAGGCCCACTCCAAGACCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCAGGTCCGTATGCTTCGATCTTGATCTTCCTCGTCTCGTCCATGGATTGATTCGTTCACGATCTAAGTTAATTAATTCGAGTAATTGATCCATATCTTTGCAATTAATTCTTTCGCACAGCAAAATCGGCTGGCTAGGATAGTAGCTAGATAGATATATTCCTTTCGAATTCAATGAGGTATTATTATCTTCCTGTTTTGTTCGTTCGCATGATTGGGTCATGATGAACTCGATCGCGGGAAAGTGATCGATCGATTTGATGGGTGGTGGTGGTAGTACGCCTTTGTTAGGGTTAGCTAGGGTTGTCGTCGTTCGTTCGTTGCTATAGCTCGTTGCTCCGCCATGGAAGAGATTGGATTCCTTCGAGAGAGAAGGAACGGTAGGGACGACGACGATCTCCATAGACGCGCCGCGCGCGCGTGCGCTGCGTGCAGTGGATCGAGCATGAAATGCGACGAGAGGGCATGAGCGCTGCTGCTCCCACGTGAACCGTTCTTGTCGGGAGGAGACGGGAGAGATATGCATCCTGACATGGGCGACGGCTCAAAAAGGAGCCATCTCCTCCTTTTTTCCACCTCGGAAACCACGCTCCTCTCTCTTCCCCCACCTGTTCACGTGGTGAGACATACGCGCCCCCGTCGTTCGTCTGCAAGCTGCTACAAGCCACGGCATCCAATCCAAACATGCCTCGCAGCGCGGCGGCTGGCTAGCTTGTTTCTCATGTGATCGTGTAGCTGCATTCCGTGGTGGGCAACTGGCCGGCAAGCAGTGTACTGTACTACTGCTGTTGCTGTGCTTGCTTGACCCATGCGTCCGGTAAAAATCTTAGCTTCTTCTCTCTCTCTCTCTCTACCTCCATCTATCTATATCTCTGGCATACTGCGCTGTCATTGGTTTTAATTACTAGCTAGCTGCATGACAATTATTAGCCACAAGCCTGCATGCAGCCGGATGCATGGATTGGCCGCTAGCTGGTGTTTTCTTGTGATTTATGCTTGCTACTCTCTGTTGATAGTAGCAGCAGATATGGTGCTAGTGCTACAGCTAAGATGATTTATTTTCGTTATTAATATTGGAGGTTTTTATGCGAGAATTTCATTTCTGTAGCTGTTGCATGCGTACGTTTACTCATTCATTAATTATTTGGTTTTATTTGCCAGCCTGCAACTAATCTGTACGCAATCAATCTACAGCTAGTAGTGACCAAGTATTTTTGGCAGTGAAATAAATTGATGATTAATTGAAATACTATCCTTGCATGCCATTAATTCTTCAGTTTTCTTCACCTCTGTATTACTGGTGATATGCACTAGTCATTAATAGTACACTTAAGATTGTTGCCAGAGCAGTGACAATAATCTACTGCTATGTATAGATTCCATGTTTTAATTACTACCCACAACTGAGACACCAGTAATTAATCAGCACATTTAAAATTCCCGCCATGTGTGATTTTCAATATATATATTGCAAATCAATGATGAATATATAAGCTTAATTGATTGTAAAAATGAACTGCCCATTTTTCTTTTTGCGAGGAAAAAAATGACCTGCCCATTATATTACAATGGAATATTGATCAACTGGCACTTAGGCTCAGTTTGAAATTAATCTCGTTAAGCTTTTTGCAACTTTTTTTAAACCACTATGTGTGTATTCTTTTAAAAAAAAGTTAATTATATACAAGTTTCTTTTAAAAAATAAAAAATACTTATTTTTATGTTTATAATAGTTAATACGGAATTAATCATACGCTAATGATATTTCTTATTTTACTTGCCTGCACCAAAACTAAGCCAAACCATTCGAAAGAACGGAGCCTTAGTTATGCATGTGTACACGCTTATATCATATGCTAGCCAGCTTTGGTTGCAGACCCGATCACAGAATATGTTGAGAAAAATTCACTATTATTTTGTAGCAAAAAAATATAATTTCACTCTAACTTGACTAAAGAGGCTGATCAGGGAACTGCCGTGCGCGCCGCACGTGCGTACCCAACCGTGTTCGAATCCCATTCGACGTGTGTGTTCACATTCTTTTCATTCTTTATCAATGCATACCATACCAAGTTACTCCTTGGTATCCAAAATTTAAAGGCTGCTTTTTTTAGCGAAAAATATAGTTTCACTCTAAGTTGACTAAAGAGGCTGATCAGGGCGTTGTCACGTCACGCGTGTGTTCCCACCCATGTTCAAATCCCATTCGACACGCGTGTTCACATTTTTTTCATTCTTTATCAATGCATACCATACCATGTTACTCCTTGGTATCCAAAATTTAAAGGTTACTTTTTTTAGCGAAAAATATAGTTTCTCTCTAAGTTGACTAAAGAGGTTGATCAGGGCGTTGTCGCGTCACGCATGCGTGCCCACCCGTGTTCGAATCCCATTAGACGTGCGTGTTCATATTTTTTTCATTCTCTATCAATGCATACCATACCAAGTTACTCCTTGGTGTCCAAAATTTAAGGGCTGCTTTTTTTAGCGAAAAATATAGTTTCCCTCTAAGTTGACTAAAGAGGCTGATGAGGACGCTGTCGCGTCACGCATGCGTGCCCACCCGTGTTCGAATCACATTTGGCATGCGTAGTCACATTTTTTTTCCTTCTCTATCAATTAATACATACCAAATTCCTCCACCATGGTATCCAAAATTTTAAATTAAGGCTGCGCTTGCATACCCGCCTGTGTTCGAATCCCATTCGGCACGCGTGTTCACATTTTTTTCCCTTCTCTATCAATAATTAGCCAATTAATCCCCTAACCATTCCATTTTTCTCCCTTTTTTTGAAATTTTTTTTGGCTCACTGTCTGATTTACATGTCGCTGCTCTCTCCTCCTGGCTTCTCGCGCGCGCCCAAATGACCGCTCGTAAGCAGTAACCGGTCAAACAAAATTTTGGGCGCCGTGGGAGACTGCATACGCGCCGGTATCCAATGCGAGTTGGAGCCGGTTGCATTACAAGGCTATTTTGCAAAAAATACATACCAAGTTTCTCCACCATGGTATCCAAAAATTTAAAGGCTGATTATCCTGGCTATAATTTAGTGTTCATGTTCACTCCCATAGTGAATGCTATAGCTCCTAGCTAGCTCCGATAGTGATGCTCCAGAATTTCAAAAACGAATTTCATTATTGCCCGCAGTGATTGAAAAGTAGTTGTGCTACTCACTGTAAATATACTATAGCGCCATATGTGATCATGTATAGTGGTACAATGAATTTTTACTGAGATTATTTCACGCATGCACAATGCATTCCATGAAATAATTTGATACATTTGTGTTCTTCACATATTGGATCAAAATATGCAGGAGGGACAGCTTCATCACCCACCGCGCCTTCTGCGACGCGCTGGCGCAGGAGAACGCGCGCATGCCGCCCATCGGCGCCGGCGTATACGGCGGCGCCGGCAACATGACACTTGGGCTCACCGGCATGGCCGCCCCGCAACTTCCCGCCGGCTTCCCTGATCAGGCCGGCCAGCCGTCGGCGTCGGCCGGCGATGTCCTCCGCCTCGGCGGCGGCAGCAATGGCGCCTCTCAGTTTGATCACCTCATGGCCTCGTCGTCGGGCTCCTCCATGTTCCGCTCGCAGGGATCGTCGTCCTCCTCGTTCTACCTCGCCAATGGCGCCGCCCATCATGCTCCCGCTCAGGACTTCGGCCCGGAGGACGGCCAGTCTCAGGCCGGCCAGGGCTCGCTGCTCCACGGCAAGCCGGCGGCGTTCCATGACCTGATGCAGCTCCCCGTGCAGCACCAGCAAAGCGGCAATGGTAACCTCCTCAACCTTGGCTTCTTCTCCGGCAGCAATGGCGGCGTCGACCAGTTCAACGGCGGCGCTGGAAACGGCGGGCAGGGCAGCATCGTTACTTCTAGCGGCCTCGCCGGCAACCACGGCGGCGGCGGCGGCGTCTTCCCTTCTCTGTACAACTCGTCCGAACCGGCCGGTACACTGCCGCAGATGTCGGCGACGGCGCTCTTGCAGAAGGCTGCACAGATGGGTGCAACGACGAGCAGCTACAACGCCGGCGGCGCCGGTGGCGCGAGCTCGCTGCTCCGTGGAGCTAGCTCCCACGGGATCAGCGCCGGTGAAGGGCCGGCCAACGAGAGGGCGTCGTACCAGAATCTCATCATGGGCTCCATGGCGAGCGGCGGCGGCGGCGCGGGTTTCGCCGGTAGCTTCTCCGGCGCGTCTGGATTCGGTGGCGCCGTCGACGACGGCAAGCTGAGCACGAGGGACTTCCTCGGCGTCGGCGTCGTCCAGGGCATCAGCGGCTCGGCGGCAATGGGGCCGCCGCGCCATGGCGCGGCTGGCCTCCACGTCGGCTCACTGGACCCGGCAAACATGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029292