BGIOSGA029306

From RiceWiki
Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029306| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029306, complete gene.| tag = OsI_323...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029306

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029306, complete gene.

LocusTag

OsI_32316

Ensembl Transcript ID

BGIOSGA029306-TA

Ensembl Protein ID

BGIOSGA029306-PA

Length

5436

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20706782..20712217

Sequence Coding Region

20711758..20712217,20709797..20710389,20707434..20709543,20706782..20707287

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20706782..20712217 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20706782..20712217 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCACAACTGACCCCACGCCGTCCGTATCTGCTGCGCGCCTTCTATGAATGGCTGCTGGATAACCAGCTCACGCCGCACCTGGTTGTGGATGTGACGTTGCCGGGCGTGCTGGTTCCAATGGAATATGCACGCGACGGACAAATCGTACTGAACATCGCGCCACGCGCGGTGGGTAACCTCGAACTGGCCAACGACGAAGTGCGCTTTAACGCGCGTTTCGGCGGTGTACCGCGTCAGGTTTCTGTGCCGCTGGCTGCGGTGCTGGCGATTTATGCGCGTGAAAACGGTGCAGGCACCATGTTTGAGCCGGAAGCGGCGTATGACGAAGACGCAATTCACGTCAATGACGATGAAGAAGCTGGCGCTGAAGGTGAAACGGTCATGTCGGTGATCGACGGCGATAAGCCCGACCATCACGACGACGACGACGATCCTGATGACACACCGCCGCCGCGCGAAGGCATGGTGCCTGAAACCAGTCTGTTAATCATTGATGAAGCGACGCACAGTGGAACGATAAACGTCAAGAATACCGACTCGCACCCTTCACTTTTATATACGAATGTCGTTGATCTGCCGGATGATACCGGTCTTAAGCTTATTGCGACGCAGCCAGTGGTACGTCTTGAGCCAGGTCAGACGCAGCAGTTGCGCTTTATTCTTCAGAATAAACAACCGTTGGACGTTGAGCATTATAAACGCGTCACGTTCGACGGTATTCCACCTAAAAACGATGATAAAAAAATCAAGATCGGTATAAACATTCGCCAGGATATCCCCGTGCTTATTCGTCCGGCATCTCTGGGAGTGGTTACTGATGCCTGGAAGTTCCTTAAGTGGTCTTCAAACGGCGCGTCTGTCACCGTGAAAAACCCTAGCAAATATGTGGTCCGTCTTGGGCAGAACGTAATGCTGCTGCCTTCAGGTGTGAGTGCCACTCTGTCCAAAACCTACATTCTTCCTGGCGAAACGCTAACGGCTGATATGAAAAAGAAAGTCAGCGGTGACAGCAGCGTTAAGTTTTTCCCGGCCAGCCGCTATGGCGTTGAGGTCAATGGGAAAGAGCGAGGAATGGCTGCAGTTCGTTTCAACAAAGATGGCGTGCTTTGCTTTGACAACGATCTCATGGAGTTTGCCGGGCTGATGCCTGTGCCAATAAAGTCTAATGAGGCGTGTCACGATATTCGTGATAACTATCCTAAAGCCATCATCAACGCTTTGCCTAACCAGGAAGCCGTTGAACTCTATCTGCCAGCTGAAGCGGTGAACAGTCTGTCGGGAGATATCAAAAACTTTCAGCATGGCGGAACGGCGGCGCTGCTGAACTATTCATTGTTCAGTACCCATAACGACTATGGTGACAACGACACTAGCCGCTACTCTCAGGCCAGCCTGGAAGCCGGATTCAACACGATGGACTGGGCGCTGCGCAGCCGTTATATCCTGACGGATGACAACGGTAGCCGAAATGCTGAAAGCATTTACACCTATGCAGAACATGTATTTGCCGCGCAGAAGATGACGATGCAGGTGGGTGAAATCAACGCCATGTCTAACGTGTTGAGCGGCGTGCCGATTACCGGCGTGCAGTTTATGCCGACCAGCGGCCTGGCGAAAACAAGCTCTGGCGTGAGTGTTTCCGGTATCGCCCAGTCTTCCCAGGCACGTGTAGAAGTCCGCCAGAACGGGCAGTTGGTCTTCAGTACCCTTGTGCCTGCTGGCCCCTTCACGCTGGATGACGTGCCCGTGGTTCGCAACAATGTGGATCTGGACGTCTCGGTGGTAGAGTCCGATGGTGCGACTAACCGGTTTATTGTCCCGGCGTCTCAGGTAAGGGCGCGCAACCTTTCACGCCCACAGGGACTGACCCTTTCTGTAGGTCAGGTGCGCAGCATCGAAAGCGAATATAGCGATCCGCTGGTAATGAACATTTCTGACGGCTGGCGCATCTCACCGTGGATGAATCTCCTGGCTTCTGGTGCAGCTGCGGAAAACTACCAGCCACCAGGCGCCAGAACAGAGTTCCTGATAAACGATGACTGGACTCTTTCAACGGGCGCACCAGTCAGCAGTGCGAGCTTTGGTCACAGCAGCAGCGGAGTAAAAACCGATCTGCAAAGTGATTATATCCTGAACGAGTATGTCGGTCTTTCAGGCAGTGCGACGCATTACAGCGGCGAGTACCGCGAAATGGCTGACGCAATGGATGACGATTATCAGGGATATGACAATACCTATTCCGGCAACGTTCGTTTCTCCTCCCCTCTGGCGGGTGTGTTTAGCGCAGGGTTCAACTACAACCAGACCAATGGTGGTAGGGATGACTCACGTTATCTCCTGCTGTCCTGGGGCAAGACCTTTTCGTACGCGTCAGTGTCCATGAACTGGCAAAGTGCGGTCGGTAATGTCGATGACGATCAGGACAATGAGATGTTCTACGTCAATGTGAGCATCCCGCTCGGTGGCAGTCAGTCGATCAGTTCCTATATGCGTAAACAGGGTGATAGCACCACCTATGGCGTGTCTAACAGCGGCTCGCTGGGAGACAATACGCACTATTACATCTCAGCCGATCGCGATCAGGATACCAAAGACAACAGCTTCAATGGCAACATCAACACTAACCTCCACTATACGCAGCTAAGCGTGGGGGGCGGAACCAGTGGTGATAATCAGCGGAACTACAGTGCGACATTGTCGGGTGGCGTGGCCATGCATAAAGAGGGCGTGACTTTCTCGCCGTATTCGATTCAGGATACCTTCGCGATTGCCAGACTGAGCGAGAAGAAGAGCGGCGTTGAAATTTCCACTCCGCAAGGCACCGTCTGGACCGATCCATGGGGCCAGGCCGTGGTGCCTTCTCTCAACGAATGGCATAACTCCCGCATAGAAATTGATGCTAACAAGCTGCCGCAGAGTATGACGCTTGCTAACGGCACGAAATATATCGCCGCAGGCCATGCTTCGGTCAGCGAGATTGATTTCAAAGTACTCAACAGCCGCCGCGTCATGCTGAGCGTAAAGCAGGCTAACGGTCAGCCCCTGAATAAAGGGATCTCGATTGTTGATGAGAAAGGTAACTATATCGTGACCACGGTTGATGATGGCCACGTCTTTATTAACGATGCCGATCAGCTGAGCGCCCTCTACGCGCTAGACGGGGTAACCCATGCTGAAGACTGTCAGATCAGCCTCTCACAGCCGGTGGTGGATTATCACGAGATGCGTCGGGATACGATCGAAACGACGCAACAGGACTGGCACAAAATGGCCGATCGTGGCATCACGGTCAACGTTTTCTGTCCTCAGACTCAGCAGATGGCGGTGTTACTGCGCGGTACAGCTGGAGATAAGGGGCGGTTTCTTTTTGGGCAGTCCGGTGGTGTCGCGGTCAAAATTGACAACATGACCGTCGATGGCAAAAGTTACAGTGTGGGTAAAACAGTTGATCAGCTAAATTTTACGCCTGAAAACGGTACGCCGACACCTCTCTACCTGCGTAATAACGAGGCGGTGATTGCGCTTGAGAATAACCAGGTTCCTTCCGGCCAGCAGATGAGTTTCAACGTAACGCTCTCGCCGGTTCTCAACGATAGCGCGTTCAGCCATCTGACAGATCAAACTACGCTGGAAAGTGATTTGTCCTGGAGTTTATTGACGAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVLVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDAIHVNDDEEAGAEGETVMSVIDGDKPDHHDDDDDPDDTPPPREGMVPETSLLIIDEATHSGTINVKNTDSHPSLLYTNVVDLPDDTGLKLIATQPVVRLEPGQTQQLRFILQNKQPLDVEHYKRVTFDGIPPKNDDKKIKIGINIRQDIPVLIRPASLGVVTDAWKFLKWSSNGASVTVKNPSKYVVRLGQNVMLLPSGVSATLSKTYILPGETLTADMKKKVSGDSSVKFFPASRYGVEVNGKERGMAAVRFNKDGVLCFDNDLMEFAGLMPVPIKSNEACHDIRDNYPKAIINALPNQEAVELYLPAEAVNSLSGDIKNFQHGGTAALLNYSLFSTHNDYGDNDTSRYSQASLEAGFNTMDWALRSRYILTDDNGSRNAESIYTYAEHVFAAQKMTMQVGEINAMSNVLSGVPITGVQFMPTSGLAKTSSGVSVSGIAQSSQARVEVRQNGQLVFSTLVPAGPFTLDDVPVVRNNVDLDVSVVESDGATNRFIVPASQVRARNLSRPQGLTLSVGQVRSIESEYSDPLVMNISDGWRISPWMNLLASGAAAENYQPPGARTEFLINDDWTLSTGAPVSSASFGHSSSGVKTDLQSDYILNEYVGLSGSATHYSGEYREMADAMDDDYQGYDNTYSGNVRFSSPLAGVFSAGFNYNQTNGGRDDSRYLLLSWGKTFSYASVSMNWQSAVGNVDDDQDNEMFYVNVSIPLGGSQSISSYMRKQGDSTTYGVSNSGSLGDNTHYYISADRDQDTKDNSFNGNINTNLHYTQLSVGGGTSGDNQRNYSATLSGGVAMHKEGVTFSPYSIQDTFAIARLSEKKSGVEISTPQGTVWTDPWGQAVVPSLNEWHNSRIEIDANKLPQSMTLANGTKYIAAGHASVSEIDFKVLNSRRVMLSVKQANGQPLNKGISIVDEKGNYIVTTVDDGHVFINDADQLSALYALDGVTHAEDCQISLSQPVVDYHEMRRDTIETTQQDWHKMADRGITVNVFCPQTQQMAVLLRGTAGDKGRFLFGQSGGVAVKIDNMTVDGKSYSVGKTVDQLNFTPENGTPTPLYLRNNEAVIALENNQVPSGQQMSFNVTLSPVLNDSAFSHLTDQTTLESDLSWSLLTK</aaseq>

Gene Sequence

<dnaseqindica>1..460#1829..2421#2675..4784#4931..5436#ATGTCACAACTGACCCCACGCCGTCCGTATCTGCTGCGCGCCTTCTATGAATGGCTGCTGGATAACCAGCTCACGCCGCACCTGGTTGTGGATGTGACGTTGCCGGGCGTGCTGGTTCCAATGGAATATGCACGCGACGGACAAATCGTACTGAACATCGCGCCACGCGCGGTGGGTAACCTCGAACTGGCCAACGACGAAGTGCGCTTTAACGCGCGTTTCGGCGGTGTACCGCGTCAGGTTTCTGTGCCGCTGGCTGCGGTGCTGGCGATTTATGCGCGTGAAAACGGTGCAGGCACCATGTTTGAGCCGGAAGCGGCGTATGACGAAGACGCAATTCACGTCAATGACGATGAAGAAGCTGGCGCTGAAGGTGAAACGGTCATGTCGGTGATCGACGGCGATAAGCCCGACCATCACGACGACGACGACGATCCTGATGACACACCGCCGCCGCGCGGTGGTCGTCCAGCACTACGCGTAGTGAAATAAATCCGCTTGCGGCCTGTTTATTAAAAGCCAGTGATATCACTGGCTTTTTTTTATTCTTATTTCAAATAATCGTGACGATAGGTATAAACAAGCATTGTTTATACCTCTTGATTCTTCATCACTTGGTTAATAATTAAATGGATTTATAATTCCTGTGAATTATTGTGATTTAAGCCAATATCAAAACAGTGATAAAAGTAAAGGTAAATTTTGGGTAATATTATTTTTTTGATGTTAATCTCCTTTTTAAACGAGTAATTCCTTAATAAATTAAGGAAATAATCATTTTTTTGATATTCTTAATATCAAAATTAATTTTGCTAAATTGCATGTATTTATAAAAATAATATTATGGGCGCATGCTGACAAGCATGACTACAATCAGTAATCGGTAAAGGCATTTACCATTACGTGATTTAATATTGCAATTTCTCGTATGTTAAGGATTAACAAGTGAAAAAAGTATTACTCGCTACCGCCCTTTCTCTGTGTGTAACATCAGCATTTGCTGCTAACCCTACCGCTGTTCTGAAGGTTAAGGGTACGCTGACAAATGCAGCATGTACGCCAACATTAAGTAATGGTGGTACCGTTGACTACGGTAGAATTAATCTGGGCAATTTGAGTGCTACAGCGGTTAACCAGCTGGGTCAGAAAAATATCGACCTGACCATTAATTGCACCGCGGCAACGAAAGTCTCCTGGAACATGGTTGACGATCGCAAAGATTCAAACGCGAAACTCGAAGTTGAGAAGGGCATGTTTGGTGGGGATTCTCAGACTTCTGAAAGCCAGCTTTATGGTGTCGGTAAAACTGCAGGTGCAACACCAGTAAGCATCGGTTCTTATTCAATGTTTGTTAAAACTGACAGCGTAGTGGCTGATGGTGCTACTGTTGATCCAATTTACCAGCAGGGCTCTGCGGGTGAATGGACTAAGAGCATCAACGGTTCTACTCAGGGCGACAACTATCGTGATTTCACCGTTGCGACTGTTGGCTCTTTGGCTCCTCTGGCGTTCGAAACGGAAAACTTCCCACTGGTAACCTCCCTGGCGATCCAGGATACCACCACGCTGGCGATCACTGATGACACCCAGCTTGACGGTCAGGTAACAATCAGTCTGCGTTATCTGTAAGACTTTTTAATCGAGTAAATATTATTTAATTACCGGAGAGTAAATGCGCTGCATTTACTCTCTTTTTAACGGCGCGATAAACATGGACTGTTCTGTTGTTGCTTTCAAGGAGATATTATTATGCAAGGTTTAAAATCCACTTTAATTAATACACTTATTACTGCCACATTATTGTCTGCCAGTGTTGCTGTACATGCAGAAGGCATGGTGCCTGAAACCAGTCTGTTAATCATTGATGAAGCGACGCACAGTGGAACGATAAACGTCAAGAATACCGACTCGCACCCTTCACTTTTATATACGAATGTCGTTGATCTGCCGGATGATACCGGTCTTAAGCTTATTGCGACGCAGCCAGTGGTACGTCTTGAGCCAGGTCAGACGCAGCAGTTGCGCTTTATTCTTCAGAATAAACAACCGTTGGACGTTGAGCATTATAAACGCGTCACGTTCGACGGTATTCCACCTAAAAACGATGATAAAAAAATCAAGATCGGTATAAACATTCGCCAGGATATCCCCGTGCTTATTCGTCCGGCATCTCTGGGAGTGGTTACTGATGCCTGGAAGTTCCTTAAGTGGTCTTCAAACGGCGCGTCTGTCACCGTGAAAAACCCTAGCAAATATGTGGTCCGTCTTGGGCAGAACGTAATGCTGCTGCCTTCAGGTGTGAGTGCCACTCTGTCCAAAACCTACATTCTTCCTGGCGAAACGCTAACGGCTGATATGAAAAAGAAAGTCAGCGGTGACAGCAGCGTTAAGTTTTTCCCGGCCAGCCGCTATGGCGTTGAGGTACCGAGCTTTACATCGGAATTAAATAAATAGGGATATGACGGTGATTAAACAAAGCCGCCTTGCATTTTGTGTCCGCGCCATTCTTTGCGGCACATTACCTCTGGTATTACTTGATTCGACATCCGTCCTGGCGAGGGAAGTCACCTTCGATACGGGGATTATGCAAACGCTGGGGTTGAATACAGATCTCAACCATTACTTCGCTGAAGCACCGCGATTTTTACCCGGAACCCACTCCGTTTCGGTGAAGGTCAATGGGAAAGAGCGAGGAATGGCTGCAGTTCGTTTCAACAAAGATGGCGTGCTTTGCTTTGACAACGATCTCATGGAGTTTGCCGGGCTGATGCCTGTGCCAATAAAGTCTAATGAGGCGTGTCACGATATTCGTGATAACTATCCTAAAGCCATCATCAACGCTTTGCCTAACCAGGAAGCCGTTGAACTCTATCTGCCAGCTGAAGCGGTGAACAGTCTGTCGGGAGATATCAAAAACTTTCAGCATGGCGGAACGGCGGCGCTGCTGAACTATTCATTGTTCAGTACCCATAACGACTATGGTGACAACGACACTAGCCGCTACTCTCAGGCCAGCCTGGAAGCCGGATTCAACACGATGGACTGGGCGCTGCGCAGCCGTTATATCCTGACGGATGACAACGGTAGCCGAAATGCTGAAAGCATTTACACCTATGCAGAACATGTATTTGCCGCGCAGAAGATGACGATGCAGGTGGGTGAAATCAACGCCATGTCTAACGTGTTGAGCGGCGTGCCGATTACCGGCGTGCAGTTTATGCCGACCAGCGGCCTGGCGAAAACAAGCTCTGGCGTGAGTGTTTCCGGTATCGCCCAGTCTTCCCAGGCACGTGTAGAAGTCCGCCAGAACGGGCAGTTGGTCTTCAGTACCCTTGTGCCTGCTGGCCCCTTCACGCTGGATGACGTGCCCGTGGTTCGCAACAATGTGGATCTGGACGTCTCGGTGGTAGAGTCCGATGGTGCGACTAACCGGTTTATTGTCCCGGCGTCTCAGGTAAGGGCGCGCAACCTTTCACGCCCACAGGGACTGACCCTTTCTGTAGGTCAGGTGCGCAGCATCGAAAGCGAATATAGCGATCCGCTGGTAATGAACATTTCTGACGGCTGGCGCATCTCACCGTGGATGAATCTCCTGGCTTCTGGTGCAGCTGCGGAAAACTACCAGCCACCAGGCGCCAGAACAGAGTTCCTGATAAACGATGACTGGACTCTTTCAACGGGCGCACCAGTCAGCAGTGCGAGCTTTGGTCACAGCAGCAGCGGAGTAAAAACCGATCTGCAAAGTGATTATATCCTGAACGAGTATGTCGGTCTTTCAGGCAGTGCGACGCATTACAGCGGCGAGTACCGCGAAATGGCTGACGCAATGGATGACGATTATCAGGGATATGACAATACCTATTCCGGCAACGTTCGTTTCTCCTCCCCTCTGGCGGGTGTGTTTAGCGCAGGGTTCAACTACAACCAGACCAATGGTGGTAGGGATGACTCACGTTATCTCCTGCTGTCCTGGGGCAAGACCTTTTCGTACGCGTCAGTGTCCATGAACTGGCAAAGTGCGGTCGGTAATGTCGATGACGATCAGGACAATGAGATGTTCTACGTCAATGTGAGCATCCCGCTCGGTGGCAGTCAGTCGATCAGTTCCTATATGCGTAAACAGGGTGATAGCACCACCTATGGCGTGTCTAACAGCGGCTCGCTGGGAGACAATACGCACTATTACATCTCAGCCGATCGCGATCAGGATACCAAAGACAACAGCTTCAATGGCAACATCAACACTAACCTCCACTATACGCAGCTAAGCGTGGGGGGCGGAACCAGTGGTGATAATCAGCGGAACTACAGTGCGACATTGTCGGGTGGCGTGGCCATGCATAAAGAGGGCGTGACTTTCTCGCCGTATTCGATTCAGGATACCTTCGCGATTGCCAGACTGAGCGAGAAGAAGAGCGGCGTTGAAATTTCCACTCCGCAAGGCACCGTCTGGACCGATCCATGGGGCCAGGCCGTGGTGCCTTCTCTCAACGAATGGCATAACTCCCGCATAGAAATTGATGCTAACAAGCTGCCGCAGAGTATGACGCTTGCTAACGGCACGAAATATATCGCCGCAGGCCATGCTTCGGTCAGCGAGATTGATTTCAAAGTACTCAACAGCCGCCGCGTCATGCTGAGCGTAAAGCAGGCTAACGGTCAGCCCCTGAATAAAGGGATCTCGATTGTTGATGAGAAAGGTAACTATATCGTGACCACGGTTGATGATGGCCACGTCTTTATTAACGATGCCGATCAGCTGAGCGCCCTCTACGCGCTAGACGGTAACAATAACCGACTGTGTAAGATTGATTACACTCTGGCTGATAAGCGTGACGAAAATGCCTTCTACGAAGAAGTGAACGGAGTCTGCCGATGAACAGTCGACACTTATCGGGCTTAGTAGCCTTGCTGATGCTCGGTATGACAGGGGTAACCCATGCTGAAGACTGTCAGATCAGCCTCTCACAGCCGGTGGTGGATTATCACGAGATGCGTCGGGATACGATCGAAACGACGCAACAGGACTGGCACAAAATGGCCGATCGTGGCATCACGGTCAACGTTTTCTGTCCTCAGACTCAGCAGATGGCGGTGTTACTGCGCGGTACAGCTGGAGATAAGGGGCGGTTTCTTTTTGGGCAGTCCGGTGGTGTCGCGGTCAAAATTGACAACATGACCGTCGATGGCAAAAGTTACAGTGTGGGTAAAACAGTTGATCAGCTAAATTTTACGCCTGAAAACGGTACGCCGACACCTCTCTACCTGCGTAATAACGAGGCGGTGATTGCGCTTGAGAATAACCAGGTTCCTTCCGGCCAGCAGATGAGTTTCAACGTAACGCTCTCGCCGGTTCTCAACGATAGCGCGTTCAGCCATCTGACAGATCAAACTACGCTGGAAAGTGATTTGTCCTGGAGTTTATTGACGAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029306