BGIOSGA029308

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Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029308| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029308, complete gene.| tag = P0489D1...")
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Gene Name

BGIOSGA029308

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029308, complete gene.

LocusTag

P0489D11.34

Ensembl Transcript ID

BGIOSGA029308-TA

Ensembl Protein ID

BGIOSGA029308-PA

Length

2740

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20695476..20698215

Sequence Coding Region

20698015..20698215,20696769..20697557,20695780..20695827,20695476..20695703

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20695476..20698215 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20695476..20698215 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCTTGGGGAACGGCTACTGCTCGTCGGGGTCGGAGGGGGAGGACGAGGACGAGGGGATGGAGGGGTACCGGAAGGGAGGGTACCACGCCGCCAGGCCCGGCGACCGCTTCGCCGGCGGGAGGTTCGTCGCGCAGCGGAAGCTCGGCTGGGGGAACTTCTCCACCGTCTGGCTCGCGTACGACACCCTCCTCAACAGATTTGTCGCGCTCAAGATCCAGAAAAGCGCGAGGGATTACGCACAGGCGGCACTCCACGAGATTGAGTTGCTGTCGGCGATAGCCAAAGGTGACCCGACAAATTCCAAGAATGCTGTGCAATTGCTGGACCATTTCAAGCATGCTGGTCCAAACGGACATCACGTTTGCCTGGTCACCGAGTTCCTCGGTGATAGCTTGCTAAGGTTGATACGGTACAACCGGAATAAGGGCATTGGTCTGAGCAGAGTCAAGGAAATCTGCCGATCAGTGTTGGTCGGTCTTGATTACTTGCACAGAGAGCTCGGCATCATCCACACGGATTTGAAGCCGGAGAATGTTCTTCTTGTATCGACAATAAACCCATCGAAGGACCCAGTGCGCTCTGGGTTCACACCGATTCTTGAGAGAACTGTGAGCAACCAGTACAGCGGATCAGTAATTAGTTTCAGTGAGAAGATGCTTAAGATGCGGGCAAGACGCGCTGTCGCCAAGATTTCACTGAGGAGGGAGTCTCTTGGTGGAGTTGCAGCAGAGATGGAGAAGGAGAGAAGCCTGGATGGTATTAGCTTGAAGTGCAAGATTGTTGATTTTGGGAATGCCTGCTGGGGTAGTCAGCAGCTTGCTGGTGAAATTCAGACAAGGCAGTACAGAGCTCCTGAGGTGATCATTGGTGCTGGGTACTCATATTCTGCTGATATGTGGTCATTTGCTTGCATGGCCTTTGAGCTTGCAACCGGTGAAGTGCTGTTTGCTCCCAAGACTTGCCAGGGCTGTAGTGAAGATGAGGATCACTTGGCTCTGATGATGGAAACCCTTGGAAAGATGCCTAAGAAGATTGCTAGCTCAGGTACTCGTTCAAAGGATTACTTTGATCGGCATGGAGATTTAAAGAGGATCAGAAGGCTGAAGTTCTGGCCTCTAGAACGTCTACTTGTTCAGAGATACAATTTCACTGAACCTGATGCCCAAGGTTTAGCTGATTTTCTTCGTCCAATTCTAGATTTTACTCCTGAAAACAGACCCACAGCTGCAGCTTGCTTGAAGAATCCATGGCTTAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAFLGNGYCSSGSEGEDEDEGMEGYRKGGYHAARPGDRFAGGRFVAQRKLGWGNFSTVWLAYDTLLNRFVALKIQKSARDYAQAALHEIELLSAIAKGDPTNSKNAVQLLDHFKHAGPNGHHVCLVTEFLGDSLLRLIRYNRNKGIGLSRVKEICRSVLVGLDYLHRELGIIHTDLKPENVLLVSTINPSKDPVRSGFTPILERTVSNQYSGSVISFSEKMLKMRARRAVAKISLRRESLGGVAAEMEKERSLDGISLKCKIVDFGNACWGSQQLAGEIQTRQYRAPEVIIGAGYSYSADMWSFACMAFELATGEVLFAPKTCQGCSEDEDHLALMMETLGKMPKKIASSGTRSKDYFDRHGDLKRIRRLKFWPLERLLVQRYNFTEPDAQGLADFLRPILDFTPENRPTAAACLKNPWLN</aaseq>

Gene Sequence

<dnaseqindica>1..201#659..1447#2389..2436#2513..2740#ATGGCGTTCTTGGGGAACGGCTACTGCTCGTCGGGGTCGGAGGGGGAGGACGAGGACGAGGGGATGGAGGGGTACCGGAAGGGAGGGTACCACGCCGCCAGGCCCGGCGACCGCTTCGCCGGCGGGAGGTTCGTCGCGCAGCGGAAGCTCGGCTGGGGGAACTTCTCCACCGTCTGGCTCGCGTACGACACCCTCCTCAACGTACGCCTCTCTTGCCGCCCCCGATTCCTCTCTTGCTTTCCGTTTCTTGTCTTGTTTTTCCCCCTCTCTCTTTGCCTGTTCTTTACTCGATGCTCGGTTGGTTTGGTTCGGTTGCTTTTGGATATTGGAAACTTCGGTTGAGGTCGTTGGAAGCTTGCTTTTTATCTGAAACTGTGCGCCCTGTCTCCTATCTCCTGTTCATCAACTGATTTGTGTTTGGTTTCCCTTCTTCTTTTGGTACAGATTTCTGAAATGCTCTGCAGCCATTTGTTTGCTTCTGATGAAAAAAAAGGGGAGAAATTTTCCTACATGTTTATATTGTTTCTACCGCACGTCTACTATTCCGATTCGTGCAAAAAAAAAGTTTTTTTTTCTCCATCACAAATATAGCAGTTGTATGGTGCAACCAATATATCATGAGTTGTCAATTTGAGTATTGCAAGTCCGAATTTTGCAGAGATTTGTCGCGCTCAAGATCCAGAAAAGCGCGAGGGATTACGCACAGGCGGCACTCCACGAGATTGAGTTGCTGTCGGCGATAGCCAAAGGTGACCCGACAAATTCCAAGAATGCTGTGCAATTGCTGGACCATTTCAAGCATGCTGGTCCAAACGGACATCACGTTTGCCTGGTCACCGAGTTCCTCGGTGATAGCTTGCTAAGGTTGATACGGTACAACCGGAATAAGGGCATTGGTCTGAGCAGAGTCAAGGAAATCTGCCGATCAGTGTTGGTCGGTCTTGATTACTTGCACAGAGAGCTCGGCATCATCCACACGGATTTGAAGCCGGAGAATGTTCTTCTTGTATCGACAATAAACCCATCGAAGGACCCAGTGCGCTCTGGGTTCACACCGATTCTTGAGAGAACTGTGAGCAACCAGTACAGCGGATCAGTAATTAGTTTCAGTGAGAAGATGCTTAAGATGCGGGCAAGACGCGCTGTCGCCAAGATTTCACTGAGGAGGGAGTCTCTTGGTGGAGTTGCAGCAGAGATGGAGAAGGAGAGAAGCCTGGATGGTATTAGCTTGAAGTGCAAGATTGTTGATTTTGGGAATGCCTGCTGGGGTAGTCAGCAGCTTGCTGGTGAAATTCAGACAAGGCAGTACAGAGCTCCTGAGGTGATCATTGGTGCTGGGTACTCATATTCTGCTGATATGTGGTCATTTGCTTGCATGGCCTTTGAGCTTGCAACCGGTGAAGTGCTGTTTGCTCCCAAGACTTGCCAGGGCTGTAGTGAAGATGAGGTAAGAAACTGTTATTTATGTTGTTTAATTTCAACTTCTCAAGAATACCATCCTATGTCTTAGTATTCCTGCTAGTTCTGATGATAATCCAGGCATACAAATATGCATCAATATGTCACATAGTCCCTTGCAACATACGACATATTAACCAAATAATAAAATGCTTTTAAAAGCATCTGCTAGGGCCTTGGCCTCTTGGGCCACTTCATCAAACAAATGTGCAAGCAGTTATCATGAAAGATGCACCCAACCTGACAAGCACCAACCTAGCTACTGAATCTTTAGAAAAATGAAAAATGAATTTATTGGGTCCACCCTCTTACTCAGTAGTATTCAAATTAACTTAACCAACTTCTGATCTGCAGAAGTTGATGGTGAAGGATATCATGTGATGTTGCTATTTGAGCAGTTTTTATCATCTTGCAAAGTCACTTTCGTTTCAATATCAATTTCCGATTAAAAGTACTGAACCTATTAAATTTTTTCGCATAAAAGGTACCAGCCAGGATACTAGGACTGTTGTGCAGTGTAAACTGCGTCGTAATATGTACTGGGACAAATTGATCTGTGTTGTTATTGTATTGAAGAAAAAAGGAAATTGTCCTCTGTTCTGATTCTGTTAAATTCATACTTATGAAGAAAAATATCTAACTGAGAAATTCCTCTTGCCAGATATAATGCACTGGTACATATAAAGTACCAACCGGTGATCCTTGTCCTATTAAAAATAACTGCAGCTAAAACTTATGTTACTGCCTGCTTGATTGCTCTGTTAAAGTGAACTTGATATCATGCCTATGTAAGATTGTCTGACACATTGATGCACATTGAATTAACTAATCAGTCAACTTCACTACTTCTTACTTCGATATAAAATCTACTGGCATAGAAGTGTTATAGTCAATCAATCACCTCATCATTCTGTTGGTATTCCTTTATAGGATCACTTGGCTCTGATGATGGAAACCCTTGGAAAGATGCCTAAGAAGGTTTGGCAAGTTTCTCCCTACACTGCATCTATCTTGATGTTTTTGAGTTTTCTCTAATCCTTCTGTTCTGTTTCAGATTGCTAGCTCAGGTACTCGTTCAAAGGATTACTTTGATCGGCATGGAGATTTAAAGAGGATCAGAAGGCTGAAGTTCTGGCCTCTAGAACGTCTACTTGTTCAGAGATACAATTTCACTGAACCTGATGCCCAAGGTTTAGCTGATTTTCTTCGTCCAATTCTAGATTTTACTCCTGAAAACAGACCCACAGCTGCAGCTTGCTTGAAGAATCCATGGCTTAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029308