BGIOSGA029315

From RiceWiki
Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029315| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029315, complete gene.| tag = OsI_323...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029315

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029315, complete gene.

LocusTag

OsI_32300

Ensembl Transcript ID

BGIOSGA029315-TA

Ensembl Protein ID

BGIOSGA029315-PA

Length

3428

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20600240..20603667

Sequence Coding Region

20602296..20603667,20601876..20601968,20601585..20601784,20601209..20601419,20600882..20601119
,20600705..20600789,20600240..20600542

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20600240..20603667 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20600240..20603667 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTGGTCATCATCTGCTTTCACCTGCATCGCCGCCTTCCTCCTCTTGTCGCCGGCGTTGTGCGCCGCCGACGACCGGATTGTCTCCGGCAAGCCACTCTCCCCCGGCGCCGCTGTCATCTCCGATGGCGGCGACTTCGCCTTGGGCTTCTTCGCCCCATCTAACTCAACTCCGGCGAAGCTGCACCTCGGCATATGGTACAACAACATCCCACGGCGCACCGTGGTTTGGGTCGCCAACCGGGCAACTCCGATCATCGTTAACGGCAGCTCTAACTCCTCGTTGCCTTCTCTTGCCATGACCAACACATCTGACCTTGTCTTGTCCGATGCCAGCGGACAGATTGTTTGGACCACGAACCTCACCGCCGTAGCGAGCTCCTCCTCGTTGTCGCCGTCACCGTCGACGGCCGTGCTCATGAACACGGGCAACCTCGTCGTTCGGTCGCAGAACGGCACCGTGCTGTGGCAGAGCTTTAGCCAGCCGACGGACACGCTGCTCCCCGGCATGAAAGTGAGGCTCAGCTACCGGACGCTCGCCGGCGACCGGCTGGTTTCATGGAAGAGCCCCGAGGACCCCTCGCCGGGCAGCTTCTCCTACGGCGGCGACTCAGACACGTTCCTCCAGTTCTTCATATGGAACGGTTCGCGCCCGGCGTGGCGCGCCGGCGTCTGGACGGGGTACATGGTGACGTCGAGCCAGTTCCAGGCCAACGCCAGAACGGCGGTCTACCTGGCACTGGTCGACACCGACAACGACCTATCCATTGTGTTCACCGTAGCAGACGGCGCCCCGCCCACGCGTTTCCTGTTGAGCGACTCCGGCAAGCTACAGCTCCTTGGCTGGAACAAGGAAGCATCCGAATGGATGATGCTCGCCACATGGCCGGCCATGGATTGCTTCACGTATGAGCACTGCGGCCCGGGCGGCTCCTGCGACGCCACGGCCGCCGTCCCGACGTGCAAGTGCCTGGACGGGTTCGAGCCAGTGAGCGCGGAGGAGTGGAACAGCGGCCTGTTCTCCCGTGGCTGCCGACGAAAGGAGGCGCTGCGATGCGGCGGCGACGGGCACTTAGTGGCGCTGCCGGGCATGAAGGTGCCTGACAGGTTCGTGCACGTCGGGAACAGGAGCCTCGACGAGTGCGCGGCGGAGTGCGGCGGCGACTGCAACTGCGTGGCGTACGCTTACGCGACCCTGAACAGCAGCGCTAAGTCAAGGGGTGACGTGACGAGGTGCTTGGTTTGGGCCGGCGAAGGCGAGCTCGTCGACACGGATAGGTTGGGTCCCGAGCAGGTCTGGGGCACCGTCGGTGCCGGCGGCGACAGCCGTGAAACACTCTACCTTAGAGTGGCAGGCATGCCAAATTCAGGTAAAAGGAAACAAGGAAATGCAGTGAAAATTGCAGTGCCAGTGTTAGTGATTGTCACCTGCATTTCCCTTTCATGGTTCTGCATCTTCAGAGGTAAGAAAAGGAGCGTGAAAGAACACAAGAAATCACAAGTTCAGGGAGTACTGACAGCTACTGCCCTTGAACTTGAAGAAGCAAGCACAACCCATGACCATGAATTTCCATTTGTAAAATTTGATGATATTGTTGCTGCAACAAACAACTTCTCCAAATCATTCATGGTTGGACAGGGCGGTTTTGGCAAAGTTTATAAGGGGATGTTACAAGGTTGTCAAGAGGTTGCTGTGAAAAGGCTAAGTAGAGACTCTGATCAAGGAATAGTGGAGTTTAGAAATGAAGTCACTCTGATTGCTAAACTACAACACAGAAATTTGGTTCGACTTCTCGGTTGCTGCGTTGAGGGACATGAGAAATTGTTAATTTACGAGTACTTGCCAAATAAAAGCTTGGATGTCGCCATTTTCAAGAGTGAAAGAAGTGTAACACTAGACTGGCCAGCAAGGTTCAGAATAATCAAAGGTGTTGCTAGGGGCCTTGTTTATCTACATCATGATTCAAGGTTGACGATTATTCATAGAGATCTCAAAACTAGTAATGTTTTGCTGGACTCGGAGCTGAGGCCCAAAATAGCAGACTTTGGTATGGCACGCATATTTGGTGACAACCAACAGAATGCCAATACTAGAAGAATTGTTGGAACATATGGCTACATGGCTCCTGAATATGCAATGGAGGGAATGTTTTCTGTCAAGACTGACGTCTATAGCTTCGGTGTCTTACTCTTGGAGGCATGGAGCCTTTGGATGGAAGGGAGGGCAAAGGAGATGGTAGACCTGAATATCACCGAGAGCTGCACTCTGGATGAGGCCTTGCTTTGCATTCATGTAGGGCTCTTGTGTGTTCAGGAAAATCCTGATGACAGGCCACTCATGTCTTCTGTTGTGTCCATCTTGGAGAATGGAAGCACCACACTGCCAACCCCAAATCACCCTGCATATTTTGCTCCAAGGAAAAATGGGGCAGATCAGAGAAGAGACAATGTCTTCAACTCTGGGAATGAGATGACTCTTACAGTTCTGGAGGGGAGATAG</cdnaseq>

Protein Sequence

<aaseq>MDWSSSAFTCIAAFLLLSPALCAADDRIVSGKPLSPGAAVISDGGDFALGFFAPSNSTPAKLHLGIWYNNIPRRTVVWVANRATPIIVNGSSNSSLPSLAMTNTSDLVLSDASGQIVWTTNLTAVASSSSLSPSPSTAVLMNTGNLVVRSQNGTVLWQSFSQPTDTLLPGMKVRLSYRTLAGDRLVSWKSPEDPSPGSFSYGGDSDTFLQFFIWNGSRPAWRAGVWTGYMVTSSQFQANARTAVYLALVDTDNDLSIVFTVADGAPPTRFLLSDSGKLQLLGWNKEASEWMMLATWPAMDCFTYEHCGPGGSCDATAAVPTCKCLDGFEPVSAEEWNSGLFSRGCRRKEALRCGGDGHLVALPGMKVPDRFVHVGNRSLDECAAECGGDCNCVAYAYATLNSSAKSRGDVTRCLVWAGEGELVDTDRLGPEQVWGTVGAGGDSRETLYLRVAGMPNSGKRKQGNAVKIAVPVLVIVTCISLSWFCIFRGKKRSVKEHKKSQVQGVLTATALELEEASTTHDHEFPFVKFDDIVAATNNFSKSFMVGQGGFGKVYKGMLQGCQEVAVKRLSRDSDQGIVEFRNEVTLIAKLQHRNLVRLLGCCVEGHEKLLIYEYLPNKSLDVAIFKSERSVTLDWPARFRIIKGVARGLVYLHHDSRLTIIHRDLKTSNVLLDSELRPKIADFGMARIFGDNQQNANTRRIVGTYGYMAPEYAMEGMFSVKTDVYSFGVLLLEAWSLWMEGRAKEMVDLNITESCTLDEALLCIHVGLLCVQENPDDRPLMSSVVSILENGSTTLPTPNHPAYFAPRKNGADQRRDNVFNSGNEMTLTVLEGR</aaseq>

Gene Sequence

<dnaseqindica>1..1372#1700..1792#1884..2083#2249..2459#2549..2786#2879..2963#3126..3428#ATGGATTGGTCATCATCTGCTTTCACCTGCATCGCCGCCTTCCTCCTCTTGTCGCCGGCGTTGTGCGCCGCCGACGACCGGATTGTCTCCGGCAAGCCACTCTCCCCCGGCGCCGCTGTCATCTCCGATGGCGGCGACTTCGCCTTGGGCTTCTTCGCCCCATCTAACTCAACTCCGGCGAAGCTGCACCTCGGCATATGGTACAACAACATCCCACGGCGCACCGTGGTTTGGGTCGCCAACCGGGCAACTCCGATCATCGTTAACGGCAGCTCTAACTCCTCGTTGCCTTCTCTTGCCATGACCAACACATCTGACCTTGTCTTGTCCGATGCCAGCGGACAGATTGTTTGGACCACGAACCTCACCGCCGTAGCGAGCTCCTCCTCGTTGTCGCCGTCACCGTCGACGGCCGTGCTCATGAACACGGGCAACCTCGTCGTTCGGTCGCAGAACGGCACCGTGCTGTGGCAGAGCTTTAGCCAGCCGACGGACACGCTGCTCCCCGGCATGAAAGTGAGGCTCAGCTACCGGACGCTCGCCGGCGACCGGCTGGTTTCATGGAAGAGCCCCGAGGACCCCTCGCCGGGCAGCTTCTCCTACGGCGGCGACTCAGACACGTTCCTCCAGTTCTTCATATGGAACGGTTCGCGCCCGGCGTGGCGCGCCGGCGTCTGGACGGGGTACATGGTGACGTCGAGCCAGTTCCAGGCCAACGCCAGAACGGCGGTCTACCTGGCACTGGTCGACACCGACAACGACCTATCCATTGTGTTCACCGTAGCAGACGGCGCCCCGCCCACGCGTTTCCTGTTGAGCGACTCCGGCAAGCTACAGCTCCTTGGCTGGAACAAGGAAGCATCCGAATGGATGATGCTCGCCACATGGCCGGCCATGGATTGCTTCACGTATGAGCACTGCGGCCCGGGCGGCTCCTGCGACGCCACGGCCGCCGTCCCGACGTGCAAGTGCCTGGACGGGTTCGAGCCAGTGAGCGCGGAGGAGTGGAACAGCGGCCTGTTCTCCCGTGGCTGCCGACGAAAGGAGGCGCTGCGATGCGGCGGCGACGGGCACTTAGTGGCGCTGCCGGGCATGAAGGTGCCTGACAGGTTCGTGCACGTCGGGAACAGGAGCCTCGACGAGTGCGCGGCGGAGTGCGGCGGCGACTGCAACTGCGTGGCGTACGCTTACGCGACCCTGAACAGCAGCGCTAAGTCAAGGGGTGACGTGACGAGGTGCTTGGTTTGGGCCGGCGAAGGCGAGCTCGTCGACACGGATAGGTTGGGTCCCGAGCAGGTCTGGGGCACCGTCGGTGCCGGCGGCGACAGCCGTGAAACACTCTACCTTAGAGTGGCAGGCATGCCAAATTCAGGTACAGGCCTAAAGCATCATACTTCATGTTATGATAAAAAACGGTTCAGGGGATATATACGACCATTGAAATAGGGAACTTAGCCCCGCAAACAACCAAATCTGAAATTCGCTCCATAGGAGATTTGAACTCAGAACCTTGGGGTACTACTCAGGTCACTATAACCACTAGACTACATGCCCTTTCGTATACGAGTTCAAGTATACGAGTGCCAAATGCAAGTATGATCCATATGCATTTCACGAAATTAGGAGAGAATATCATGTGCAAGATTCTTTAAAATGAAATATTGGTCGAAAATGAAATGAACAGTGTGTCTCTGTGCAGGTAAAAGGAAACAAGGAAATGCAGTGAAAATTGCAGTGCCAGTGTTAGTGATTGTCACCTGCATTTCCCTTTCATGGTTCTGCATCTTCAGAGGTAAGAACAGAATTCTTGTTTTTCCCATCAATGCTTCTGTACATACACTACAAGAGCAGAGGAACATAATGGTCATAAACTTTTACGGCAGGTAAGAAAAGGAGCGTGAAAGAACACAAGAAATCACAAGTTCAGGGAGTACTGACAGCTACTGCCCTTGAACTTGAAGAAGCAAGCACAACCCATGACCATGAATTTCCATTTGTAAAATTTGATGATATTGTTGCTGCAACAAACAACTTCTCCAAATCATTCATGGTTGGACAGGGCGGTTTTGGCAAAGTTTATAAGGTAACTTCCAGTGATATTATTTTAAGGATTTTTAGAGTCCTTGAGCAGGACTCGTTACCACAAATTAGCACTAGAAAGTCTATAAAATATTATACCTCTTCAAGGAGCATAAAAATCTAATTATCTTTTTATGTGCATTAACATGACACTGCTATTTCTCAAAAGGGGATGTTACAAGGTTGTCAAGAGGTTGCTGTGAAAAGGCTAAGTAGAGACTCTGATCAAGGAATAGTGGAGTTTAGAAATGAAGTCACTCTGATTGCTAAACTACAACACAGAAATTTGGTTCGACTTCTCGGTTGCTGCGTTGAGGGACATGAGAAATTGTTAATTTACGAGTACTTGCCAAATAAAAGCTTGGATGTCGCCATTTTCAGTATGTTCAACCAGCATATCACAAGTTCAAAGAACAATTTAATGAATGTTTATTTGCATTTCACACATAGCATATATGTTCTTTTGCAGAGAGTGAAAGAAGTGTAACACTAGACTGGCCAGCAAGGTTCAGAATAATCAAAGGTGTTGCTAGGGGCCTTGTTTATCTACATCATGATTCAAGGTTGACGATTATTCATAGAGATCTCAAAACTAGTAATGTTTTGCTGGACTCGGAGCTGAGGCCCAAAATAGCAGACTTTGGTATGGCACGCATATTTGGTGACAACCAACAGAATGCCAATACTAGAAGAATTGTTGGAACATAGTGCGTAATTCTTTGTGCCAATTTCATAGCTTAACATGCAGATTAACTCAATTCAGCTTTCATAACTTTTCAATGTGAAATTTTCTCAACAGTGGCTACATGGCTCCTGAATATGCAATGGAGGGAATGTTTTCTGTCAAGACTGACGTCTATAGCTTCGGTGTCTTACTCTTGGAGGTTATAAGTGGTGTGAAAATAAGCAATATTGATCGCATTATGGACTTTCCTAACCTTATAGTCTATGTAACTATTTTGCTTCTAAGCTTATATAGCTCTTAGATCCTTAAGTTATATGGAGTTCTTATGCAATCTGAAGATGTAATTTCGTTTTTCTGTTAGGCATGGAGCCTTTGGATGGAAGGGAGGGCAAAGGAGATGGTAGACCTGAATATCACCGAGAGCTGCACTCTGGATGAGGCCTTGCTTTGCATTCATGTAGGGCTCTTGTGTGTTCAGGAAAATCCTGATGACAGGCCACTCATGTCTTCTGTTGTGTCCATCTTGGAGAATGGAAGCACCACACTGCCAACCCCAAATCACCCTGCATATTTTGCTCCAAGGAAAAATGGGGCAGATCAGAGAAGAGACAATGTCTTCAACTCTGGGAATGAGATGACTCTTACAGTTCTGGAGGGGAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029315