BGIOSGA029318

From RiceWiki
Revision as of 09:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029318| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029318, complete gene.| tag = OsI_322...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029318

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029318, complete gene.

LocusTag

OsI_32297

Ensembl Transcript ID

BGIOSGA029318-TA

Ensembl Protein ID

BGIOSGA029318-PA

Length

5670

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20578453..20584122

Sequence Coding Region

20583883..20584122,20583240..20583276,20582960..20583035,20582818..20582863,20582620..20582718
,20582099..20582197,20580018..20580086,20579549..20579933,20579265..20579419
,20578641..20579130,20578453..20578520

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20578453..20584122 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20578453..20584122 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCCTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCTATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACTGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGTGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAGTGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATTGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGGTCTATGGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAGCAGCCAACTCATAACGGTCCGCCCAGCTCAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAGTCACAACTCATAGGGTCAATTGCCAGTCATTACCAAGCCAGCAACATGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MSAPPRKRKKKGRPSLLDLQKRTLRLEKLQEPPPPPPPQPRRSTRRNPAGLDSGDEGTAPGGRREKKLRLVMGLPDGSAKGEKTRKATDGSEEPSDSGPTTPLPDKKLLVFVLDRLQKKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSPDTIYYRQARAIQELAKKDFENLRQDSDASEPEPELEIKPDPEPKPQPRRGRPPNKNTIKQKVGKPPVERATADFSGATLASVGNSGHRTQPPFDLQRQVMNGSFIADVLRASFASRNNGYNWSNERKLERIEDYSGSMGKWSAKSGRKPILTEESSRSTYCQPQPSSSIYELPVSSSYNETRKLLVPVGVQLQQSYPRSLARFAAQLGPVAWEIASKRIERALPPGTKFGRGWVGDGEAPNATQPPVLTTSSTALIHPSSTETSSEQPTHNGPPSSSHSAGPQPSSAPYASSTVTTHRVNCQSLPSQQHGSVPQVSAERGEHGAEVKGNHNNLHERPAIQHTVNGFSAVSGSNIFPSAAQMVANRMQTHTAD</aaseq>

Gene Sequence

<dnaseqindica>1..240#847..883#1088..1163#1260..1305#1405..1503#1926..2024#4037..4105#4190..4574#4704..4858#4993..5482#5603..5670#ATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCCTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGTGGGCATCGTTCGTTCCCCCTCCCCCCCTCCCCTTTACCCGATCTGAGTCCCCCCGCTCCGAATCCGCGCCAATTTGGCCAATTCCGCGCGGAATTTGGCCTAATTCTGGTGCCGCCAGGGGTTCGCCGTACGGATCTGCGCAGCCGCGCGCCGCCCGAGGAATTTTCTTTGCTATTTTGGGCATGAAAAGGTCGCCCTTTATTTATTTATCTTTGTGACAAGGCGCAGTGGTCAACTCAGCTCAGCGGTGAGCTCTCCCAATCATTTGGCGGGGGATAAACCAAAAACCCTCGCATCTCCCGCATCGCCTTGCCTGCGGCGACAATAATTGGCGCACAATTCTTTTTTTTTAAATGGCTCAGTTCGAAGCTTTTAAAGTCGTGCCCTTTTTATGGGGGGAGGGTTTTGTCTGCTTCTCGCGCCCCCTTTTGCTACATTTCACGGCATCGCTAGATCTGTACTTGGTTACAGGCGCTGTGGTAAACGAAAGCCCCACTTTTTTCTGGTGCTTTTATCTCCTCCATTATTTTGGATTCTTAATCTGAGTTTTTTTTTTTTCTGTCTGTTTTGATTTTCTTTTTATCTTTTGCTGTTGCTGCCGCAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGGTTGGTGTTCCTTGCTCAGATGCATTTATTCTTGAGATTTCTAGGAACAAAAAACACCTGGGCGAATGTGTATAAAAGATGCCATTTTTAATTCTTTTAGTGCCTGAGGCATTCCAGTTATTTTTCTGGTTTAATTAATGCTTGTGCCTCTGCCTCTGATTGTTGCTGTGCTCGTGCTCGTGGGTTGATTTGTTCACTCGCCAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGTGAGTTGCTGTGCTCTCTGCTTGCTCTTCCTCGGGTTCAGTTCATTCACAGCTGCATGACCTCTAACCTAAGGTGGATTTCCTGGTTTCTTGCAGGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGGTTTGTGTTTGAAGATGATAATGTTACAGATATTTGGTTTTCTTTGTTTTGTTTCTCTGGAGTTGATTGATCTGTATCTGAATGCGTATCCTTGGCCAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGTCAGTGTCAGAGCGTATGGTGATTTTTGTTGGCCTTTCCTGTGCTGTTTCGATTTTCCTTCGAACAGTCAGGTGTGTGGTAGGCAATTAGAGTAACTCTTGGTCTGTTGCAGTTGGATTTGAATGTTGGGTCTTTAACTTGGTTATGTCCTTTGGCTTGGATCAGCTAGTTTAGCCTCCTCTGCTACATGTGCTGCCCAGTGCCAATGTTTTTATTTTGTTTTTCTTTCAGCATCCATAAATATATTTTCTTTCACATCTAGAAGTTCATTAATGAAGTTTTGGTACCTACTACCGTGGTCATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTTTTCTTTGTTTAGTTTCTCTGGAGTTGATTGATCTGTATCTGAATGCGTATCCTTGGCCAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGTCAGTGTCAGAGCGTATGGTGATTTTTGTTGGCCTTTCCTGTGCTGTTTCGATTTTCCTTCGAACAGTCAGGTGTGTGGTAGGCAATTAGAGTAACTCTTGGTCTGTTGCAGTTGGATTTGAATGTTGGGTCTTTAACTTGGTTATGTCCTTTGGCTTGGATCAGCTAGTTTAGCCTCCTCTGCTACATGTGCTGCCCAGTGCCAATGTTTTTATTTTGTTTTTCTTTCAGCATCCATAAATATATTTTCTTTCACATCTAGAAGTTCATTAATGAAGTTTTGGTACCTACTACCGTGGTCATTTAAAAAAAGTCTATTTTATACTGGTGCACTAATGCACCGTGCTTTTTAGGAGCAGATATTCACTCTCTGACTCTTAATCAAAAGAGCTAGAAACATTTAATATGAATAATATAATAGAAACCTTCGAATTTGCTGCCAAGTTACTTTCAGTGACAATATTCCATCTGTACAAGATTTTGCAGTTACACCTGATCTCCCTAGGAGAATATTGAAAAATCTCAACAATTTGAGGGCTAGTACAGTAAAATATAGCTAGTACATTTTATCTTGTAAAAGTGCACATAATAAGTTTCTTCCAAACGGTACCTACGCAGCTGCCAGGAGTTACTGCTATTGATTGTATTAAAGGAATTTTAACAGAAAAAGTATGAACAAAATTCACAAACCTATCTTATGCAGTTTTCTTGGTTTGCTCTATTTGGACATTTGACCGAAGAAAACCTGTATATCTTGAAATGGGAAACAAGAAGGATATATTTGTATCTATATTTGGCGCTTGAGTTATCCTTCTTTATGCTGCAGTTCATGCAGTGTCATTGACTTCTGGATGTGGAATTTCTGTCAGCTAATTGTGGTAGGCTATCAGAGGATGTATTGTCTATCATTGCTGGGTGGTGCTTTTCTCAAAGATCATCTTTGGTTTCTGTGTTATGCTTAGCTTGCTGAATTTAAATTGTACCAAGGGAAAGTCCTTTGCCCTGTTAATATGCATGGAGGGAACTCTTGAATACTGAGATATCCCATGCCACTGTATGTTTAATTCTACTGTACTTGTGGTTTCTGGCTAAATCAAAGGATTTTTGGGCCATTTAGCCATGAAGGGTGCTTGGATGATATCATCTAAGGTAGTTGGTAGTATCTACAATAAGACAAGAGTTTTTGAATGCCTTTCTTCTTTTATGAAATTTGCTTTAATACTCTGGTATAACACTGGAATTTATTTGGCTTATGCATGTGTGTTTATGTTTGCAGTACATATTCAACTCACACTCAAAAGAAATCACAAGTACTTAATATGAAAATGCTGCTAAGTGCTAACACATCAACTGTTATAAAGTGTGTTGAGCCTCAGGTTGGAATTATGTGTTGTTGGAAATATGAGATAGACAACTGTAACATGAGAATATATGAACTTTCTTTAATTATGATGCTAGGAAGGTTTTCTGTGATATCTGCTGCAGCTTCTATCAAATGAAGTTTTACTTGTCTGCTACCATCTCCTACCATTTCAGACATATCTGATCCACTTATTTGTACCAGACATCATAGATTTGTATTTTCACAGGGTGTTAGACTTTCTTTTACTTTAAATAACACCAGCATCATTCTTTTGATTAGTTTTATGCCATGCCTTTCTGTTTTAAAACATTGGCTCAGCCGCACACACCACAAACAATTTGATTCATATACCACTCTTGAGTACTGCATGTGCTACTGTTCGGTCCAAGTTGCAGGCTGCACTAGTTGTAACCGTGTACAGTTTACATTGTGTTGAACCCACTATTTCATATCTAGCTAAAAGGCTGTCACGCACATAATATTTTTGAAAAAAATGTTATGCATTCCTAAGGCTCATCCTAATGTGAATACTTCTTCTTTTTTTTTGTTATTTTCATCTCTCTGCAACACACTATTCCTTCTGTGGACCAGAATGCTACTAGTGCTTTCTTAAGCTCGTATGACAGGACCTGAAGTTTTAATTTACAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGTAAAGAATCATGCTTGCATGTTTTGTTTTTATGTAACCATAACGTATGCTGCATATGTGATATTTGTGTGCCATGTATTATAGGCACGGGCTATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACTGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGTGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAGTGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATTGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGTTTTATTTATTTTCTTTTATCAAAGTTTCGTGTTTTGTATGGGTTAACACTCAGTGGGAAATTGCTGAACATTTTGACAAACTTAATGTCTTCTCCTGACCACTTGCAATGCCATTCGTTTGTTGCAGGGTCTATGGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGAGTGTCCGAAATATGAGTCCTGTCTATAAGTGCTTCACCATATATGTTTATATAATCTCAACATTTTTCTATTAATGTTTGTCAACAGCAAGACATCATCACTGACACTAAAACTCTTTTTATTTGTCAGGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAGCAGCCAACTCATAACGGTCCGCCCAGCTCAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAGTCACAACTCATAGGGTCAATTGCCAGTCATTACCAAGCCAGCAACATGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGTACTAACCTAGACTCATAAGTAAAGTTCTTCTGATCTATTTCTCCTGTTAGTTCTGGTTCTAAGTTGGCTACTCCTAATGGCCCTGCCAATTTTCTCCTGTTTTTATTTTCCCTTTAAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029318

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA029318&oldid=28522"