Os10g0533900

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0533900| Description = Protein of unknown function DUF862, eukaryotic domain containing protein| Version = NM_001071693.1 GI:115483129 GeneI...")
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Gene Name

Os10g0533900

Description

Protein of unknown function DUF862, eukaryotic domain containing protein

Version

NM_001071693.1 GI:115483129 GeneID:4349227

Length

8561 bp

Definition

Oryza sativa Japonica Group Os10g0533900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21223772..21232332

Sequence Coding Region

21223933..21224067,21224215..21224476,21225128..21225195,21231887..21232162

Expression

GEO Profiles:Os10g0533900

Genome Context

<gbrowseImage1> name=NC_008403:21223772..21232332 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21223772..21232332 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggaggtggtgctccacgtgtacgacgtgacgaacagcgactcggagaagacgaacaacaccatcctccagatcaaccgcatcttcaaggaccggatcggcctcggcggcatcttccacagcgccgtccaggtctatggcgaggaggagtggtcgttcgggttctgcgagaacggcagcggcgtcttcagctgccccatcgggaagaaccccatgtacacctaccgcgagtgcatcgtcctcggggagaccgagtgctccatcgccaccgtgaaccggatcctgcgggagctcagccgcgagtggccgggacactcctacgacctcctctccaggaactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggctgggttaatcgttttgccaatgctggtgataccgctgtggtagttgctgagaacacagcagttaagttcagacaggctaaaacagaaatagtcaatgccagtagagtagcatacagatttatggcaggcctggcatcgaaaaatcaaaacccacaaccagagtccccaagtaaccaaagcagaaatggcccaactttccaggggacttggttcaagaacatcatttcgaatggcgcaaagccttcctcaagcgaatcaacttcatcgcatgacactggtactggtggtgatgaatcctctttgcagaatcaaaaaccgtcggagcagtcaacacggttgtag</cdnaseq>

Protein Sequence

<aaseq>MKEVVLHVYDVTNSDSEKTNNTILQINRIFKDRIGLGGIFHSAV QVYGEEEWSFGFCENGSGVFSCPIGKNPMYTYRECIVLGETECSIATVNRILRELSRE WPGHSYDLLSRNCNHFCDVLCERLAVPKLPGWVNRFANAGDTAVVVAENTAVKFRQAK TEIVNASRVAYRFMAGLASKNQNPQPESPSNQSRNGPTFQGTWFKNIISNGAKPSSSE STSSHDTGTGGDESSLQNQKPSEQSTRL</aaseq>

Gene Sequence

<dnaseqindica>162..296#444..705#1357..1424#8116..8391#gttaccaccaccaccacctgcaagcaaccaaccaaccaccacccgctcgctcgccgaccgccaccggcgacccaatcacccctcgccgccgccgccggagaaggaggaggagggagggagcagccggcagcggggagggggcgcgctgcgccgttgatgagatgaaggaggtggtgctccacgtgtacgacgtgacgaacagcgactcggagaagacgaacaacaccatcctccagatcaaccgcatcttcaaggaccggatcggcctcggcggcatcttccacagcgccgtccaggttcgcctccgcgcggcctcccagatcccccctagtgaggggcgcatttgcttttgcttcgccttcgccttccttcctcctccagatctcgctgattttggttggttctctctcgcccttttttgttcggatcccggaggtgcgcaggtctatggcgaggaggagtggtcgttcgggttctgcgagaacggcagcggcgtcttcagctgccccatcgggaagaaccccatgtacacctaccgcgagtgcatcgtcctcggggagaccgagtgctccatcgccaccgtgaaccggatcctgcgggagctcagccgcgagtggccgggacactcctacgacctcctctccaggaactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggtaaggggattgggattcgcagctcccgctcttccgattagagagtagcaattgcccgtgcaatgtgtatgtgtgcccaagggataccaattctcaactctgtaatgcagagaaactatgcggcgttgtctaacattaacatcggtaggtatagtaacagcagatcctaatttatttagttcatgcaaaatatgctgttggggaaatggaggagattgttacgaattggagattgtcggggagggatgggtgtacaacttggtggtactcgattagacagtagccaagaagttttactagagagtagcagttgtgctgaactcaaattcagggtgttttattttgttagagggctagtgagtagagctgcagcttagcaggagggatagcatttcttggaggtgctaattctcttggctgtatgttataacattagggacttgatttcagaactagatgaactgataaagaacaataataagctagggccgatgtgcctttatgtgaaatagatgagatttgctcacaagtcacaacttacttaaattaattgtttgtcttatccatgctaagtatggttgtattcctgctcagatttaaaatgacagataatatatttttttaactgatcttgtgttaaaaactgtgcaggctgggttaatcgttttgccaatgctggtgataccgctgtggtagttgctgagaacacagcagttaaggtatgcttattttaacttttcttacttatgcatcagcaagtttttctcttgtatgttcattgttgtgtagcacacactcttgcctgttggtatgtttaagtttttgtgtgtgttgaactaaatatttcattacaatgcttagttttcattgagtggtgaattcattgtaatgctcattttagaacagcatttataatggcattaagcttcaacaaagcctatagattcaacttagttcatgtccatagcggctatcagtgtgtcatgcacatcccaataaatccttttataattttttaataaacttcattgtagagaattatgagacgcctcacaacccaacgtgggagggcgattgtatttatatatccaatacaatagagattacaacaaactcttaaataagagttatatacggatacaatctatacaaatctaatctaactctaatacccgcccgcagtcaaagcgggaggaacatcacgaacgcaaagactggacctaaactcagtgaataactgaactggcaagcctttggtcatgatatctgcgaactgatgtgaggacagaacgtgtaaaacacgaacttgtcctaaagcaactttctctcgaacaaaatgaatatcaatctcaatatgcttcgttcgacgatgatgaacaggattagcggtcatgtagacggtgctaacattatcacaataaacgatagtggccgaagcaagtggaatatgtagttcaagaagaagttgtcgaagccagcaacattcggcaacagcatgtgctactgcacggtactcagcttcagcactagatcgagagacagtggtctgtcgcttggaggaccatgagaccaagttttcaccgaggaaaacacaataccctgatgtggaacgacgagaatcaggacaacccgcccagtcagcatcagaataagctgtcaaagagtcaactggtgcagttccgatgtgaagaccaatgtgtagagtacccttgatgtaacgcaaaatccgtttaactagagcaagatgaggctcacggggatcatgcataaacaagcatacctgctgaactgcataagctatctcaggccgcgtgagagtaaggtactgaagagccccagctagactcctgtactcagtaggatctgaaacgggagctccatctgtagcagaaagtttacatcgagcatcaaccggtgttgcagtaggatgacactccgacataccagctcgccgcaataagtcaacagcatattgccgctgagaaagaaataaaccgtctgcagatcgagtgacagaaattcccaaaaagaagtgtaagtcaccaagatcagtcatagcaaactccgagtgtaggcgagcagtaatatgctgaagaagtgaagtggacgaggcagtcagcatgatgtcatcaacatacaaaagtaaatatgcaacattatctccatctttataaatgaagagagaagtgtcagatgccgaagatgtgaaacccaactgacgaatatatgttgaaaaccgttggtaccaagcacgaggagcctgcttcaaaccatagagcggtttttggagcaaacatacagcagtaggcacagaaggatcaacaaaaccagatggttgctgacaatacagtctcctctagattgccatggagaaatgcgttcttgacatcaagctgatggataggccaagaccgagaggcagcaatactgagaacaacacgaatagtagcaggtttaacaactggactaaaagtctcatcgtagtcaatcccatgctgttgagaatagccacgaacaacccatcgtgccttgtgtcgagcaagagtcccatcggaatgaaacttatgtcgaaagatccattttccggttacaacattagcaccaggaggtcgaggaaccaaacgccaagtgttgttatcaacaagagccttgtactcatcagccatagctgcacggcagttagggtcagccaaagcactacgataattggaaggaactggcgaaacagaagtctgcatagcggtataattaaagcgctggacaggacgaagattgccggtctgagagcgagttaccatagcatgacgctgttgatcctgtgtatgttgtgcagctcgaaaagctctggtggtgcgtataggaccatgaaccgccacaggctgagtacgacgcacatacgtatggcgatatggagagatcagcggccgagcagaagcaacaccatgcaaggcaggcggctgagcaatagaagaattcgatatagtttgcactggtgatgaagaagacatgctcccgcccgtagtactagcatcggcaccagaggatgcactggaaggcgccaatatagctggttctggagcttgcgatgattgtagccttctattatggagaagaagccgatacatatcagggccggccaagtcatccagcggctcgacctcaggagagggagcgaccagtagagaacgcggacgctcgacgtccaaggaggacggagctaccgctttagaaacaccctgtagaagaaaatcaaaagaagaagcagtttggggaatagctgcaaacgggaatgtctgttcatcaaaaaccacatgacgagagatgaaaacatgacgggtagaaatgtccaaacaacgatagcccttgtgagaagccgggtaaccaagaaaaacacaggcagcggatcgaggagagagtttatgaggagtcgtggcactaagattaggataacagaggcaaccaaaaacccgaagattagaataatcaggaactttgtgatgcaggatttgaaacggaatggagtcgtggacggaagttgagggtcttcgattgagtaagtatgtggctgtggctagagcttcggcccagtaaggaggcatggatgcttgtatgagtagggtgcgaatggaattgttgattgtgcgaagcatgcgttcggctttgctgttttgaggagaagtgtaaggacaggataagcgaagcaaggttccacggctagcgagaaacgaggtagtggcttggttaacaaattcggtaccattatccgcctggaaacacttaatggaagagccgaactgggtcgtaacataagcaacaaactcaacaatatgctggtgaacatcagacttatggcgaagaggaaaagtccaacaaaagtgactaaaatcatccagcaccactaaataatacttaaagccagaagtactcaagacaggagaggtccacacatcacagtgaacaagctcaaaaggagaagatgtactagactgagaccgagaaaaaggtagacgcgtgtgtttccctaactgacacgcatgacacaaactatgatctatcttagtataaggaagaatagctaatttgtggagagtctgaatagcagctgaactgggatgaccaagacgacgatgccacagggtagaggattgggccaggaagctgtgggcagcaatagcaggtgcagcagtaggtagagtgtagaggtcaccacgactattgcagcgaagaatcacgcgccgggtacggaggtccttaacagaaaaaccaaactcatcaaactcaatggaacagttattgtcacgagtgaattgacgaacagaaagtagattgcgaaccaaagagggggcgacaaggatgtttttaagatcaaatttagtggttcctataggtagaaaagaagtgccacgacaaataacaggaatagtatgaccattgccaacggtaatgaaggtatgggaattgggaagacgagtaacgagaatatcgtcggtagaggacatgtgtgaagtggctcctgtgtcaagcacccaaggacttggactttgcacggacaactgattgagggcagtaatcagacctgcctgatcccaattgggctgagattgctgcattggtggcaagcccggcattggtggagagacatatgggcctgcaaatgtcgtgtgtgcttgaggatatgggccaagcaggccggcactgttgctgggacgccagagagactgctgctgctgcacagcccatggattgaaacagacccatgggccggtaggtcgtggcccagcctggtgctgctgctgctggaaattgttcccgaagttgccatagccgccgccattgctgttgttctgtcgtccgccattgccgccaccactgctgttggtcgctggttgcggcgaccaccgttgttggagccaccgccacgagactgggatgaagaagaggacgcacaggtgccggaagtgcagtcattggcagaggaggcagccaccaccatggctgtctcagcctggaccttgtgtgcattggcaattcgcagctctttgagcaacaaggtgttgcgcgccaaggcaaaggagggcagaacaggggcgctggcgatgttgtcggtggtgctcgaaaaacgagagttgaggccgctcagcaagttgaggacaagctgagattcggtgacagggtggccgacgtcgcggagggcatcggcagcagtcttcaccttctgacaataatcggcaatgggcatgtcaccttgcgtcattgagtggaactcgtgactgagatagatggcgcggggttccttgtttgcttgaaagagatcgtcgatggcgagccataggtcgcgggcggtctggtcgggttccatgacgacgtcgaggatagcatcggaaacggagctgaacagccagccccgaacacaacaatcggcttgtgcccaagtcgagtcttcgggacgagggggtgcggtgccatcaatgtgaggaaggagcccaaacttgccacgcatagaagtgaagaaggtcttccacttgttgaaattggggtgcttgagctccagggtaattggtatgtgagtcttgacgttgacggtggcatacgggttgacgaagatcgagccggtagaatccctggtgctggcagcagaagatggagtagagccggatgatgtagatgccattgttcccgaggttgtggaagaggaggtggactcggtagacatggcagagaggcagaataatcacgacgcggcgaagacagaaggcggcgcagcgtgagcagagcagggcagagcgcggcgtggcgcgatgggggcagagcgtggcgcggcgcggaatgagcgagggcgcggcgcggtgcgtcgtggcacgatggtgacgcggaaggcgcggtggggctggggcgcggcgagatcgtgaggggaaatcgctggggcgcggcgcggtggtggggacgcggaagtcgcgtgggcagcggaagagaagcgaacgcggaaaaagcgaaggccagaggaagcggcgaattaggttagaaggaaaccggtatctgataccatgtagagaattatgagacgcctcacaacccaacgtgggagggcgattgtatttatatatccaatacaatagagattacaacaaactcttaaataagagttatatacggatacaatctatacaaatctaatctaactctaatattcatgttcatagggaagttttctctttgttgattttgtaattgtgactatagtacatacagtatgtagttgagttattttattatgtggtgcacttgacttttctattcaactacttaatttaaagtctgcaccccatctctagattcctggctttaccacaaaaatagatttgaccatgtatgtcactcagaaactttgcttagtctatccttcaggaccttcaccagaaaatccagtgctggtctgattgttcatagattttcatttacatggcagcttggcttggtgagcacagcatgatctacttcgttagctctgttgttttgactcatttacatgatatacttctgtgttagcatcttctctgtgaatacattaggtgttaatacatgataccactacgccatgaatccttgaaaattgccatgttatggacttaatccatgcattcaaacaatgtacgtgtagccatcatagtcactagctcatcagttgactgaccatttccctttctcacattgatcaatgagataatgcattgaaagtgaaacacctacttaagtgaatctgcataactataaatggcaacaaacttttcagccacctttcttgaagttgttgacagtatccctttagatgttatggtcatgtcatactgtcatgcccatctaagatactccagttatcttctgtaaatgctattttttccttttatagttacaagatgtccattactagataaatacctcaaaatggtctacttgtcactactgttgcatctatattctttttcttcacgactttcctcatgttggttactttccatattcatgttttagatcttgaggctttctacaatccttggggggtataggtatctgtagtattaattggagggatagtatgactgaaatgagggatataccttgtgactaacattatgaagcatatatgtctcaagaaccctataaaaacccttagatcttatgctattttcatcaagatatagacagttgtacactcaatgccatttacgtttggacaacaacagttgcatgcattttttttgtttttgctaatgtgattatagaccattcctacaatatgaagtaggataaatgagcgattctgagcttgatcaccgtgttgcttatatgtagtgatatcacattcattatttctcctaacatgcttttttattgtgaaattctgttttgcagttcagacaggctaaaacagaaatagtcaatgccagtagagtagcatacagatttatggcaggcctggcatcgaaaaatcaaaacccacaaccagagtccccaagtaaccaaagcagaaatggcccaactttccaggggacttggttcaagaacatcatttcgaatggcgcaaagccttcctcaagcgaatcaacttcatcgcatgacactggtactggtggtgatgaatcctctttgcagaatcaaaaaccgtcggagcagtcaacacggttgtagccgctgccaccagttatcacctgttgaattgaatctgtagtgtaacagtagccagcatttgttaaaaatacatggcatgtttattcacgcatgaatctcttgtatctctgcgttgtcttgcaacgggaaacatgaaatgttaaaacacgtcatccaaagcttgacagttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0533900, RefSeq:Os10g0533900