Os10g0534100

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0534100| Description = Conserved hypothetical protein| Version = NM_001071694.1 GI:115483131 GeneID:4349228| Length = 3953 bp| Definition ...")
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Gene Name

Os10g0534100

Description

Conserved hypothetical protein

Version

NM_001071694.1 GI:115483131 GeneID:4349228

Length

3953 bp

Definition

Oryza sativa Japonica Group Os10g0534100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21234921..21238873

Sequence Coding Region

21235131..21235201,21235345..21235392,21235480..21235620,21235698..21235712,21235813..21236058
,21236199..21237038,21237708..21237768

Expression

GEO Profiles:Os10g0534100

Genome Context

<gbrowseImage1> name=NC_008403:21234921..21238873 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21234921..21238873 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgctttcttattggggctaaaagaatggagagttccagctctggttcttgtcctcagggtacagtgtatcattggtttgtcttgtttgcggtttggctttgtggcagccagcatgttctttcgcagaaaacaccacttgaaccaaaagataaattccttctatctgatccgccaattggtctctttgatccaatagagatttcaccatctgttcttccacacaatgctaacccagttgagccactgtcaccgatgtatccaaactacacatcatatgatccggtcttgactggaaaatgccatgtaaatttctcagcgctttcttatatgatggataaaacagcatctgattgttccattcctttagcaccactagttgctgatgtgatatgctgcccccaagttaatagcttgatgaatattttccaagctacatatggtgctggaaacaatacactagttctgaaccaggcttcagcaaatgcttgtttctctgatgttatgagcattctggcaagcaaaggagcaaacactaacatccctgagttatgtactctaaggccatcaaatcttacggatgcttcttgccctgtgaaggatattagcacatttgagaaaatagttaatgtaagcaagcttctagacgcatgcagcgatgttgacccactgaaagagtgttgtagacctgtttgccagcctgcaatagtggaagcagcagttcacatatcctctggaggagcaaacatgtttggaagttctagcatatctggaagtgatgctgggatcaacgtcgttagtgactgcaaaggggtagttcactcctggttatctatgaagctttcatcagaagaatcaaacactgcttttagagtattatctggctgcaaggtgaacaaagtttgtccgttggagtttgatgatccttcttccgttgttaaggcatgtggcaaggcatcttcttcaacgccctcatgctgtggggcattgcactcttacattgcaactcgccagaagcaaatatttgtaacaaatttgcaagcaattaactgtgcaaccatgttcggatcaatgctacagaaagctggtgtatcaaatgatatttatgagctttgtgatattgatttaaaagatttcagcctgcaagcatttggtcagcaaggctgtctacttcgcagcttacctacagacattgtatttgacaatgctacgggcattagttttacatgtgatttgagtgacaacattgcagcgccatggccatcatcatcatctgttcaatccttgtcactttgtgctccagaaatgtcattgcctgcattgcctgtcgcgccaacatctggaagctcagtaggtatctccagaactggaattggaattttggcgcctcttctattctttgcgacggccatcaccttctga</cdnaseq>

Protein Sequence

<aaseq>MCFLIGAKRMESSSSGSCPQGTVYHWFVLFAVWLCGSQHVLSQK TPLEPKDKFLLSDPPIGLFDPIEISPSVLPHNANPVEPLSPMYPNYTSYDPVLTGKCH VNFSALSYMMDKTASDCSIPLAPLVADVICCPQVNSLMNIFQATYGAGNNTLVLNQAS ANACFSDVMSILASKGANTNIPELCTLRPSNLTDASCPVKDISTFEKIVNVSKLLDAC SDVDPLKECCRPVCQPAIVEAAVHISSGGANMFGSSSISGSDAGINVVSDCKGVVHSW LSMKLSSEESNTAFRVLSGCKVNKVCPLEFDDPSSVVKACGKASSSTPSCCGALHSYI ATRQKQIFVTNLQAINCATMFGSMLQKAGVSNDIYELCDIDLKDFSLQAFGQQGCLLR SLPTDIVFDNATGISFTCDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVAPTSGSS VGISRTGIGILAPLLFFATAITF</aaseq>

Gene Sequence

<dnaseqindica>3673..3743#3482..3529#3254..3394#3162..3176#2816..3061#1836..2675#1106..1166#gtggcgcacacagtcgctcgctcgctcgcctgcctccccacctcaccagctcaccccacgcctcccctcccctcccctccccaaccctaatcccctccccgccggcgcgctcccctcgccgctcgccgccccccacggcagccgcagggcaagggaggggggagacactgcccctgcaggtgcacgcgccgtggcggcgcgcgcgctctctctctcgcggggaggaggcggacgcgcgcggcccccacccgccgggatcggcgcgctccagatccagcggtgacggcgggagccgaggtgaggcgggctgcttgagtggttacagtgagttgtttttggtgctgagttcaccagcaaagcgaatctagtcgcattcttttttttttttttttgggggggtgggggggggggcattttgctggaacaagggagtggaagtaggggaagtagtacatttcgttgctcgaaatgcttactatcgattaaatgttgggaaactggaggtggtagcatggtgaaaaaggcagagagtttagctgacgctgtaggtggtttcacaatgctcttggtcttggatgtaacacatgctgctcacttcgtgcagcagccaggatcctgagctcccacttactatcttagtgctatgtgagtgaggagaaacgtatacttgcctgggattccaacatctgaccagttgctaaggctaacggcccatttttagctcagttaatgtgaaccatacctgaatgcttaacgaaaatagtatatatttctgtgtttctatttatagagtagcttgcaaactcattatctcattcacgtggaaaatgtacgccgttaaggaatcgttgctggcgagttgattgggagtacgagtctctgggatatgcatgattatgtacttgactttgttcatgaagtgttactcttgcacttttctttctaatggttctatttttcttggtgcattaccattcattttacgtgtatacacaggctttttacgcctatttgtttcatgcagtgctaccgtccccaatgatcctacgagtagagctactggacttttactgggactgaggaccctgtacaaactgcctcatgcatgtgctttcttattggggctaaaagaatggagagttccagctctggttcttgtcctcagggtgagtatgtcaatctgcatattattatagccagtaaattttatccaagcttaaggggaagatactgagatatgaatatagaagtctgcttggaacttttagttcttaacgctgaaccattcatatgggtgtgtgaactaggttgcaaatgtgtcagcactcagcagtagcattaacattggggatgacatggtagagcatagatgggacaagcatgtcacattattttcttcaaaaaattggcatgttaacatagttttacagatgaagcgatatggacactatgtctacaatatatactgtcttgcacctattttgaaaatttcagcttttctgataatacccagcacaaccattctcttgtaataataagctacttatattatttgctgattaagaacctgttgtagtgcatactgaatattcctgataacttgatgaatataataatgattacggttccatgatatactagatttgctaggtagcaaactcctttcctttcatggagaaatcagtttaaaatttactgtggattttttatgggtatgcatattatgtgcaggccatatgcttactaggcaaaagtccatatttagttgaatcacactatacaatatctgtaatttcccttcaatgtgctattctaaaatgattgttgcattgcaggtacagtgtatcattggtttgtcttgtttgcggtttggctttgtggcagccagcatgttctttcgcagaaaacaccacttgaaccaaaagataaattccttctatctgatccgccaattggtctctttgatccaatagagatttcaccatctgttcttccacacaatgctaacccagttgagccactgtcaccgatgtatccaaactacacatcatatgatccggtcttgactggaaaatgccatgtaaatttctcagcgctttcttatatgatggataaaacagcatctgattgttccattcctttagcaccactagttgctgatgtgatatgctgcccccaagttaatagcttgatgaatattttccaagctacatatggtgctggaaacaatacactagttctgaaccaggcttcagcaaatgcttgtttctctgatgttatgagcattctggcaagcaaaggagcaaacactaacatccctgagttatgtactctaaggccatcaaatcttacggatgcttcttgccctgtgaaggatattagcacatttgagaaaatagttaatgtaagcaagcttctagacgcatgcagcgatgttgacccactgaaagagtgttgtagacctgtttgccagcctgcaatagtggaagcagcagttcacatatcctctggaggagcaaacatgtttggaagttctagcatatctggaagtgatgctgggatcaacgtcgttagtgactgcaaaggggtagttcactcctggttatctatgaagctttcatcagaagaatcaaacactgcttttagagtattatctggctgcaaggtgaacaaaggtatgtgatgtcatacactgtttggtttggtttcatctgttaatgggataatctgtagatatgttgtgtactgtggccaagttttcggtactttgtgctatgtgcacaatgtgatctatctgactcattgaatcatgcagtttgtccgttggagtttgatgatccttcttccgttgttaaggcatgtggcaaggcatcttcttcaacgccctcatgctgtggggcattgcactcttacattgcaactcgccagaagcaaatatttgtaacaaatttgcaagcaattaactgtgcaaccatgttcggatcaatgctacagaaagctggtgtatcaaatgatatttatgagctttgtgatattgatttaaaagatttcagcctgcaaggtatggacagaagacatgataacttgtaatcaattgtacttcacattggaatgatctaactttgtttactattcttggcattattctcccactggaacagcatttggtcagcaaggttagttcattctattaactttatttggtttccatcggtctgaagtcctgtgctaatgccaaccttcctttttgtaggctgtctacttcgcagcttacctacagacattgtatttgacaatgctacgggcattagttttacatgtgatttgagtgacaacattgcagcgccatggccatcatcatcatctgttcaatccttgtcactttgtgctccaggtaaggtgacatttcaggtttagcactagaaaaaacagtgagcttcgtacaacacaaattgacatgatacccctcctttggtttcagaaatgtcattgcctgcattgcctgtcgcgccaacatctggaagctcaggtacttaatttacctttttgttggcaatacaatatatatctcattttattctttcatgtttctattagaatcattactctctttttacatcactataactctatccttatgccaacaaactgaaaagacgcttgttatggcagtaggtatctccagaactggaattggaattttggcgcctcttctattctttgcgacggccatcaccttctgagaaatgcttcacctagtgaaccaggagcttcttacccctgttgtattttttcccctctgtgcaggcccacgtgtaaattgaattgcatttcattcttgtaaatgagcctttcccttctctgttcttttttgttcggtggatagcattgctgttatgtgttagagaggactgttgtaccatcagatatctgaacaatggaggtaaatttct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0534100, RefSeq:Os10g0534100