BGIOSGA029359

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Revision as of 09:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029359| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029359, complete gene.| tag = B1274F1...")
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Gene Name

BGIOSGA029359

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029359, complete gene.

LocusTag

B1274F11.6

Ensembl Transcript ID

BGIOSGA029359-TA

Ensembl Protein ID

BGIOSGA029359-PA

Length

3052

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20001459..20004510

Sequence Coding Region

20004188..20004510,20003969..20004119,20003709..20003876,20003400..20003626,20002614..20002737
,20002012..20002074,20001768..20001911,20001459..20001590

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20001459..20004510 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20001459..20004510 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCCGCCTCCTCCTCTCTGCTCGCCGCCGCCTCGTCGTCCTCCCGCGCGGCGGCCGTGTCCGCCCGCCGCGCCCCCAGCGCGAGTCCGGCCGCGGCGGCCTCCCTCCCCTCGCCGTCTCGCGCCTCCTGCGCTCCTCCCCTCCGTGCTTCCGCAGCGAGGACCCTCCGCAGCCGTGTCGTCGCGAGCGCGGCCCCCGCTATGCAGCCGCCGCCGGCGTCGAGGGTCTCCACGGTTGTCGACGTCGACCTCGGCGACCGGAGCTACCCGATCTACATCGGCGCAGGCCTTCTCGACGAGCCTGAGCTGCTGCAGAGGCATGTTCATGGGAAGAGGGTTTTGGTGGTGACCAACACCACCGTCGCGCCGCTCTACCTGGAGAAGGTGACCTGGGCACTCACGCACAACAACCCGAATGTTTCTGTGGAGAGCGTGATCCTGCCCGACGGCGAGAAGTACAAGGACATGGGCACACTGATGAAGGTTTTCGACAAGGCAGTCGAGTCCCGGCTGGACCGGCGGTGCACGTTTGTTGCGTTGGGAGGTGGCGTTATTGGGGACATGTGCGGTTTTGCAGCTGCTGCGTTCCTGCGTGGTGTCAATTTCATACAGATTCCTACTACTCTGATGGCCCAGGTGGATTCATCTGTTGGAGGGAAGACCGGCATTAACCATCCATTGGGGAAGAACTTAATTGGGGCGTTCTACCAGCCACAGTGTGTACTGATAGACACCGAGACACTGAATACATTGCCTGACAGGGAACTGGCTTCAGGCATAGCTGAGGTGGTGAAGTATGGTCTCATAAGAGATGCACCGTTCTTTGAATGGCAAGAGAAAAACATGCCAGCATTATTAGCAAGAGAACCAAGTGCTCTGGCCTATGCTATTAAGAGATCGTGTGAAAACAAAGCTGAAGTGGTTGCTCAAGACGAGAAGGAAAGTGGTCTCCGAGCAACACTTAATCTCGGCCATACATTTGGCCATGCTATAGAAACAGGAACTGGCTATGGAGCATGGCTCCATGGGGAGGCTGTTGCAGCTGGAACAGTTATGGCAGCTGACATGTCTCACCGCCTGGGTTGGATAGACGAGTCAATCAAGAAACGGGCAATTGACATACTAGAGAAAGCGAAGCTTCCAATTACACCTCCAGAGGCCATGACAGTGGAGAAGTTCAAAAGTATTATGGCCGTTGATAAGAAGGTTGCTGATGGATTGCTGAGGCTCATCCTCCTGAAAGGACCTCTGGGAAGCTGTGTTTTCACTGGCGATTACGACAGGAATGCCCTCGACGAAACCCTCCGTGCATTCTGCGACAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAASSSLLAAASSSSRAAAVSARRAPSASPAAAASLPSPSRASCAPPLRASAARTLRSRVVASAAPAMQPPPASRVSTVVDVDLGDRSYPIYIGAGLLDEPELLQRHVHGKRVLVVTNTTVAPLYLEKVTWALTHNNPNVSVESVILPDGEKYKDMGTLMKVFDKAVESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTETLNTLPDRELASGIAEVVKYGLIRDAPFFEWQEKNMPALLAREPSALAYAIKRSCENKAEVVAQDEKESGLRATLNLGHTFGHAIETGTGYGAWLHGEAVAAGTVMAADMSHRLGWIDESIKKRAIDILEKAKLPITPPEAMTVEKFKSIMAVDKKVADGLLRLILLKGPLGSCVFTGDYDRNALDETLRAFCDS</aaseq>

Gene Sequence

<dnaseqindica>1..323#392..542#635..802#885..1111#1774..1897#2437..2499#2600..2743#2921..3052#ATGGCGGCCGCCGCCTCCTCCTCTCTGCTCGCCGCCGCCTCGTCGTCCTCCCGCGCGGCGGCCGTGTCCGCCCGCCGCGCCCCCAGCGCGAGTCCGGCCGCGGCGGCCTCCCTCCCCTCGCCGTCTCGCGCCTCCTGCGCTCCTCCCCTCCGTGCTTCCGCAGCGAGGACCCTCCGCAGCCGTGTCGTCGCGAGCGCGGCCCCCGCTATGCAGCCGCCGCCGGCGTCGAGGGTCTCCACGGTTGTCGACGTCGACCTCGGCGACCGGAGCTACCCGATCTACATCGGCGCAGGCCTTCTCGACGAGCCTGAGCTGCTGCAGAGGTATTTTTCTTGCTGGATTTAGTGAATTGGTGCGATCATTTCGTGATCCTGATGCCTTAGCTGCGCAGGCATGTTCATGGGAAGAGGGTTTTGGTGGTGACCAACACCACCGTCGCGCCGCTCTACCTGGAGAAGGTGACCTGGGCACTCACGCACAACAACCCGAATGTTTCTGTGGAGAGCGTGATCCTGCCCGACGGCGAGAAGTACAAGGACATGGTGCGTGTGTGGTTCAGACTTAAGCGTTCTGAGAGACTACCAGTTGTTGTTTCAGTCCAATTTGGGTGTACTTAACTGCTTGTGGCTTGCAGGGCACACTGATGAAGGTTTTCGACAAGGCAGTCGAGTCCCGGCTGGACCGGCGGTGCACGTTTGTTGCGTTGGGAGGTGGCGTTATTGGGGACATGTGCGGTTTTGCAGCTGCTGCGTTCCTGCGTGGTGTCAATTTCATACAGATTCCTACTACTCTGATGGCCCAGGTCCTAAGCTTGATTTAGATTTTTTACTACAATTGGTTACATGTAGCTTGATGCTAACGGTGAGCTGCATGAATTACTTTAGGTGGATTCATCTGTTGGAGGGAAGACCGGCATTAACCATCCATTGGGGAAGAACTTAATTGGGGCGTTCTACCAGCCACAGTGTGTACTGATAGACACCGAGACACTGAATACATTGCCTGACAGGGAACTGGCTTCAGGCATAGCTGAGGTGGTGAAGTATGGTCTCATAAGAGATGCACCGTTCTTTGAATGGCAAGAGAAAAACATGCCAGCATTATTAGCAAGGTATTGAGCACGTTTTGTCATTGTGTTGTCTAATGTTATTTCAATTCAATAACCGGCTTATAAAAATGTGCAGCTGCATTAGGCCTGCAGTTTGTTTGAAGTTTATATCAGTTAGCTAGTTATGCTTTATTGTCCTCTCTCAGACTGAAATGTTTGGTGCTCTAGATGCATCCCTATTTTGGAAGCATGTCTTCTTTTTGTATTTATATTTGTTGAACTGACTCATTTTTTTAGTTAAGCAACCATATCAGGAAAACATGTTTTACCGAAAATTTGCAAAGTTCATTTTATCCCTGAATAACCATTATAAATGAAACATGTATCATCTTATGAGTAAATGGTTTGACTGAATAGAGTGTCTCAGCTGTTGTGTTACCCTGCTAACTTAGAAAGATCATTGTTGTACATGTCAATCCTAGCTTAGTTGTTTACATTTCTGTTATGCTTCCTTTGATCATTTATGTTGCTTAACAGGCAGACATAGAACCATTGAACTACCATATTTTTGCATTACCATGTTAACTCAGAGAATGCTGAACTGTAAATCAGAAAAAAAGTTTGCGGAGTCTATTTCAGTTTTTACAGTATCATGTATACCATGATAATGCTGAAATATGGATAATAGTTTTCCCCCACTTATCGATCGTAATTCCTACTTGTAGAGAACCAAGTGCTCTGGCCTATGCTATTAAGAGATCGTGTGAAAACAAAGCTGAAGTGGTTGCTCAAGACGAGAAGGAAAGTGGTCTCCGAGCAACACTTAATCTCGGCCATACATTTGGCCATGTAAGTATTATCATTAACTATGGTTGATTTTATGCTGAACTAATGTCAATAAACATTATAATGCACTCCATGTTTAGTACTCGTATGATTTGCTGGGCTGGTAAAAAGTACAGATTTATTTCTTTTGCTTAAATGTTGATGGGGTTATCCTGTGCTCCTTATTAATTAACACATTATAAAATGGAAAGAGGCCTTGAAATTTGTTGTTTAGGTCAGGAATATGTTGTGGTACACCTTCCCAAACTACTTTACTTTATCGTAAAAGTTCATTACTGTAATAATCCGAAAGAGTTTGTTCACAACAAATCTGTTATATCATTTTCATGTATTCAAACTACATATTTTGGATAACATATGCTGTCAAAAATAGTATGTTTGGACTTGACTGTATGTAATCTTAGAGTAATATGGTGGCCATAGGTTGCAGAATAAATCATTCTTAATTCAAATATATGGGTGCCAGAAACTAAATATCCTCAACAGTTTGTTTAATGATGTACTCCTACATATTATTTATGATCACTTTATTCAATTGCCAGGCTATAGAAACAGGAACTGGCTATGGAGCATGGCTCCATGGGGAGGCTGTTGCAGCTGGAACAGTAAGAACACCTGAATATTTTTACAACACCTCGATTTCATTATTTTGTATTGTTTCATTACTTATCTTTTGGTTCTGTTTCTATGTTGCCACCACTCTAGGTTATGGCAGCTGACATGTCTCACCGCCTGGGTTGGATAGACGAGTCAATCAAGAAACGGGCAATTGACATACTAGAGAAAGCGAAGCTTCCAATTACACCTCCAGAGGCCATGACAGTGGAGAAGTTCAAAAGTATTATGGCCGTAAGTACCCTCGTACCTTGATATGTTACAAAGTGGATCTGATCAGCTTTTGTTACCAAACAAATTGTTGGATAACCTATTTTTTGTTATTGTATGCATTGGTATATAGCAGAGCTCTCAAGTTGTTTTTCCTCTATTGAAAAGCAGCATTATTGAATTCCTGAATGATTGCATCAGGTTGATAAGAAGGTTGCTGATGGATTGCTGAGGCTCATCCTCCTGAAAGGACCTCTGGGAAGCTGTGTTTTCACTGGCGATTACGACAGGAATGCCCTCGACGAAACCCTCCGTGCATTCTGCGACAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029359