BGIOSGA029368

From RiceWiki
Revision as of 09:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029368| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029368, complete gene.| tag = P0569E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029368

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029368, complete gene.

LocusTag

P0569E11.11

Ensembl Transcript ID

BGIOSGA029368-TA

Ensembl Protein ID

BGIOSGA029368-PA

Length

4055

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19839253..19843307

Sequence Coding Region

19843197..19843307,19842673..19842781,19842265..19842501,19842052..19842137,19841720..19841835
,19841088..19841168,19840572..19840772,19840341..19840492,19839455..19840143
,19839253..19839330

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19839253..19843307 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19839253..19843307 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAAGATAGTGACGTACAACGTGAACGGGCTGCGGCCGCGGGTGGCGCAGCATGGCTCGCTCCGCCGCCTCCTCGACGCCCTCGACGCCGACATCATCTGCTTCCAGGAGACAAAATTGTCGAGGCAGGACTTGTCGGGGGATGTCATCATGGCTGAGGGATACGAGGCTTTTATTTCATGCAATCGTTCATCGAAAGGGCGTGGAGCTTACTCTGGTGTTGCCACGTTTTGCCGGGTAACATCAGCCTTTTCCAGTCAAGAGGTTGGTTTACCAGTAGCAGCTGAGGAAGGCTTTACTGGATTGCAAGAGACTGCAAAGAACAGTGAAACTATTGGGGATTTTGTTCTTGTAACTCCTGTGGAAGAGGAAGGTCTTGGTGAAGTAACAAAAGAAGAGCTGCTCAAGGTGGACAATGAAGGACGTTGTGTAATTACAGATCATGGACATTTTGTTCTTTTTAATATATATGGCCCAGCTGTTGAAGAAGATGATATAGAACGAGTTCGCTTTAAGCTACTATTTTACAAGATACTACAGAGAAGATGGGAACATTTGTTGGCTCTTGGGAAAAGAGTTTTCGTTGTTGGTGATTTGAATATTGCACCTTCTTCAATAGATAGGTGTGATGCCCAACCTGGATTCGAGAAGCAAACGTTTCGGAAATGGTTGAGATCCATGCTGAGAGAACATGGAGGTCCATTTTTTGATGCTTTCCGATCAAAACACCCTGAAAGAGTGGGAGCTTATACCTGTTTTAATCAAAAAGTTGGAGCTGAAGTATACAATTATGGTTCTAGAATTGATCACATTCTCATTTCTGGTGCCTGCTTCCATCACTGCGGTTCTGTGGATGACCACAGCATCTTTCCCTGCCATGTGGAAGAATGTGAAATTATGGATCATTTCAGAAGAGGGAATAGCAAAAATATGTCAATGTGGAAAGGAGGGAGAAGTAGTAAGCTAGAAGGATCAGATCATATTCCAGTTTATATTGTGCTGAATGAGATACCTGAACTTCCAGTTCATAACACTCCTTCATCAGCTGCTAGATATCTTCCTGAAATCCGTGGACGGCAACAGAGCATAGTATCATTCCTAAGGAAAGGCATGATTTATGAACATAAAGATGCCATGTCCATGGATAGAGCAGATGAAAGCTGCTGTGGTGGTGGCTTGGAAAGCAAAGCTATATATAAGGAAGAACCACCAACTGATATAGCCAAATTTTCCAAAGGTAACGACCTTCATAGTGTCATCAAGCGGAAAATTCGTGATCAATTGTTAAATGAAGGTTCAAGTGGCAACTCCCATAATAGCACTGCAGCATTACTGGCAACACAAAGTAGAAAAGCTTCCTTTTCTTGCAGCAAGACTGTGTCCAACAAGAAGAATAAACATAACTTGTCTTCCCAACCTACGATCAAGTCATTTTTTCAACAACCAAAGTCAAAGCCAGGAGATAGCAGTACCAATAGCATAGTTACTCCACCAGATACTTTGCATGGTATGGATGAATTACATGATCCAAAGAATGACTGTCTGCCAGAAAGCATCCAGTGTACAACTCCAGCAACCGAAGATCAGGGTAACTCAGATGTACCCTGCTCGCTTTCAACAGATAAATGCAATGAAGCAACACTGGAGTGGCAAAGAATACAGCAGAGAATGAAGATGACCCTACCACTTTGCAAAGGACACCATGAACCTTGCATTCCAAGGTCTGTGAAGAAAGGCTCTAATATTGGTCGCCTATTCTATGTCTGTGCCCGTGCTCAGGGACCTGCATCAAACCAAGAAGCAAATTGTGGTCACTTTCAGTGGGCCACTGTTAAGTCTAAAGAGAAACGCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSGDVIMAEGYEAFISCNRSSKGRGAYSGVATFCRVTSAFSSQEVGLPVAAEEGFTGLQETAKNSETIGDFVLVTPVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKILQRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAFRSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEIMDHFRRGNSKNMSMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLPEIRGRQQSIVSFLRKGMIYEHKDAMSMDRADESCCGGGLESKAIYKEEPPTDIAKFSKGNDLHSVIKRKIRDQLLNEGSSGNSHNSTAALLATQSRKASFSCSKTVSNKKNKHNLSSQPTIKSFFQQPKSKPGDSSTNSIVTPPDTLHGMDELHDPKNDCLPESIQCTTPATEDQGNSDVPCSLSTDKCNEATLEWQRIQQRMKMTLPLCKGHHEPCIPRSVKKGSNIGRLFYVCARAQGPASNQEANCGHFQWATVKSKEKRR</aaseq>

Gene Sequence

<dnaseqindica>1..111#527..635#807..1043#1171..1256#1473..1588#2140..2220#2536..2736#2816..2967#3165..3853#3978..4055#ATGGTGAAGATAGTGACGTACAACGTGAACGGGCTGCGGCCGCGGGTGGCGCAGCATGGCTCGCTCCGCCGCCTCCTCGACGCCCTCGACGCCGACATCATCTGCTTCCAGGTCCGCTCAATCGCTCACCCCCTGCCTCCCCACCGCACTCCGCAGCACTGGCCGATGCCTCGCAATCTCATCATGTATATAAACCCTAGCTGTTTGATGGGGTACTACTTCAGTGATTCACTCACTGTAGGTCACCACAAATGATGTAATCGATCGCACTGTTATGTTCAGAAATACACAAATGTGCTAAATTAGCATTGTGTTGCCATAGCCGCTTGATTTCATAGAGATTCAGAACGCGTACCGTTTGTTTATTTATCTCTGAACTGATAAATGAGCATTGTTCTGTGGTGGAAGCTGCACATTTGCTGTTAAATGTTTAGTCACGCCAACACGTGCAGTTTCTGTATGAACTATGAAGTAAGTTAAGCCCGCGATTCAGCAGAGCTGACTAAATTAATGTGATGTATTTCAGGAGACAAAATTGTCGAGGCAGGACTTGTCGGGGGATGTCATCATGGCTGAGGGATACGAGGCTTTTATTTCATGCAATCGTTCATCGAAAGGGCGTGGAGCTTACTCTGGTGAGTTTTTCTGGAGATTAACCAGGAAATACCCATCGACTGATTTGGGGTGGGGGTCTTTTAGCAACGCACTATTAGTTGAAGTTGTTTTTCAATCATTCAATCTATTGGTTAATTTACTTTGAATGTTGTGTCACGAAGTGTAAGTTTCTGTACTTAACTCTATTGTAGGTGTTGCCACGTTTTGCCGGGTAACATCAGCCTTTTCCAGTCAAGAGGTTGGTTTACCAGTAGCAGCTGAGGAAGGCTTTACTGGATTGCAAGAGACTGCAAAGAACAGTGAAACTATTGGGGATTTTGTTCTTGTAACTCCTGTGGAAGAGGAAGGTCTTGGTGAAGTAACAAAAGAAGAGCTGCTCAAGGTGGACAATGAAGGACGTTGTGTAATTACAGATCATGGACATTTTGGTTGGTCTCTTGTTCTGTCCCCTTGAAATATAGACAGCATAAGTAGCATTCAGCATGTTGATGTTTATTCGTTGCACATTTGATTTCTTCTCTTTATTTGATGATATTTACTGCACCATTTCTGCAGTTCTTTTTAATATATATGGCCCAGCTGTTGAAGAAGATGATATAGAACGAGTTCGCTTTAAGCTACTATTTTACAAGATACTACAGGTACTTCATGTGCATCTCAGTCAGTCAGTAAATTTTTGAGGAATAGTTTCACGATTGATTGATTTCTGCCAATGATAATAGCTTGTTTACTGACTTACTCTGATTTTATTTCTTTTTAGTGCAAAATGTGCACCCCTCCTGTGTCTTCCTTAAATAACTGTTAATAGCTTAGTTAAAGGACTGTTATTTATACTGTCTTCATCTCATATCTTCTAGAGAAGATGGGAACATTTGTTGGCTCTTGGGAAAAGAGTTTTCGTTGTTGGTGATTTGAATATTGCACCTTCTTCAATAGATAGGTGTGATGCCCAACCTGGATTCGAGAAGCAAACGTAAGCTCATTTCCTTTTCCTTTTTAGTAAGATTTACTTGGACCGTTTTGGAATCTCAAGTCAAAGTTTTGCTGAACTTGCATGATTTTAAGACATGAAAATAAACTGAATAACCTCAGCACTATTACTAAATATATCAATTCGTTTCATAGGAAAATTCCATTTAACATGATCTGGTGATACTTTTCTCTGTAAGAACAATCTGCTGTTGAGGGCTGTCAAGGTCAGTGAGGCAACATCATATGAGAAGCAAAACTTTAGCATTTCAAGTGAAGTTCCATGCACAGGCCACGTGAACTTAGAGCTGCTTCTGCTTTCACCTATAATGACGTAATGCATCTTGCAGCACTAAGGCTGAAAGTTCAGTAGAAATTGTTGATAAGTGAAGCTTGAAATTTTTTGAACTTGACCTTCCACTTGTGATGAGTTCGCTAGTCTGATGATGTGCTTGATAATACATCAATCATTTATTTTATCCTCTCTTTAGAGTACTCTAACATGAAGCCACTTGGGAATGACAAATTACTTCATTACCCTTTCCCTAATTCAAGGTTTCGGAAATGGTTGAGATCCATGCTGAGAGAACATGGAGGTCCATTTTTTGATGCTTTCCGATCAAAACACCCTGAAAGGTATTGAAAGCTCTCTTTCTTTGTTCCATGCTTGTGTGCTTATCCAACCTATTTTAGTTTTTGTTATAATTCCAGTTACTCCATGCCTACAGGGTAGGTTTGTATTTCCCTGTTAATGTTAATCAATTTCTTCTGAAACTTAAGACCTACTCTGTATGCGGCCCATTATTGAGGCTTAGAAAGCATGCCTTGAATTTGTTAAATGGAACAAATATTTATCTTTTCTCTTTATAAGATTAACAACTATAGCAGACACAGAATTACTTGCTAACCATGTACCTTGATATTCTAACCTTGCTGCTTTTTCTTATGCAGAGTGGGAGCTTATACCTGTTTTAATCAAAAAGTTGGAGCTGAAGTATACAATTATGGTTCTAGAATTGATCACATTCTCATTTCTGGTGCCTGCTTCCATCACTGCGGTTCTGTGGATGACCACAGCATCTTTCCCTGCCATGTGGAAGAATGTGAAATTATGGATCATTTCAGAAGAGGGAATAGCAAAAATATGTCAATGTATAGAATGGTCGAAAGTTTTCTTTGCAGGATTTGCAGTGACACATTAGAATTATTTACTATATTACATTGTCCACAGGTGGAAAGGAGGGAGAAGTAGTAAGCTAGAAGGATCAGATCATATTCCAGTTTATATTGTGCTGAATGAGATACCTGAACTTCCAGTTCATAACACTCCTTCATCAGCTGCTAGATATCTTCCTGAAATCCGTGGACGGCAACAGAGCATAGGTGAGCAACCTTTTGTGTTCCTACTTAAGTAATATAGGCTTTTAATGTTTATTATAGCATTATAGCATATAACTTGTGAAGGCAGCCGCTCCTGGCCTTATTTGATAGTTTAGTTATGAGTACATACTTGCGTGCATATTGAAGTAATACTGTTTGTGTGCGCATTATGCTGACCAATTGTATTTTCCAACATGCAGTATCATTCCTAAGGAAAGGCATGATTTATGAACATAAAGATGCCATGTCCATGGATAGAGCAGATGAAAGCTGCTGTGGTGGTGGCTTGGAAAGCAAAGCTATATATAAGGAAGAACCACCAACTGATATAGCCAAATTTTCCAAAGGTAACGACCTTCATAGTGTCATCAAGCGGAAAATTCGTGATCAATTGTTAAATGAAGGTTCAAGTGGCAACTCCCATAATAGCACTGCAGCATTACTGGCAACACAAAGTAGAAAAGCTTCCTTTTCTTGCAGCAAGACTGTGTCCAACAAGAAGAATAAACATAACTTGTCTTCCCAACCTACGATCAAGTCATTTTTTCAACAACCAAAGTCAAAGCCAGGAGATAGCAGTACCAATAGCATAGTTACTCCACCAGATACTTTGCATGGTATGGATGAATTACATGATCCAAAGAATGACTGTCTGCCAGAAAGCATCCAGTGTACAACTCCAGCAACCGAAGATCAGGGTAACTCAGATGTACCCTGCTCGCTTTCAACAGATAAATGCAATGAAGCAACACTGGAGTGGCAAAGAATACAGCAGAGAATGAAGATGACCCTACCACTTTGCAAAGGACACCATGAACCTTGCATTCCAAGGTCTGTGAAGAAAGGCTCTAATATTGGTCGCCTATTCTATGTCTGTGCCCGTGCTCAGGTATTTAACTTCAGAATCAACTGCTCAATTCACATCCGAGGAACAATCATAAAGGTAGTTCATATTGACAGAGGATGAAAAGCATTGGCATTGTGCTGTAACCACCATGTATTGTCTATGACAGGGACCTGCATCAAACCAAGAAGCAAATTGTGGTCACTTTCAGTGGGCCACTGTTAAGTCTAAAGAGAAACGCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029368