Os10g0534500

From RiceWiki
Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0534500| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001071696.2 GI:297610837 GeneID:4349230| Length = 4...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0534500

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001071696.2 GI:297610837 GeneID:4349230

Length

4471 bp

Definition

Oryza sativa Japonica Group Os10g0534500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21246300..21250770

Sequence Coding Region

21248144..21250678

Expression

GEO Profiles:Os10g0534500

Genome Context

<gbrowseImage1> name=NC_008403:21246300..21250770 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21246300..21250770 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcgatcgttttgctgctcttccttgtcgtgggcttgatgccggtttccaatgggcagacgacgcccttctccccgcgattctccgtctacctcgcgtgcggcgccggcgggaacgtcgtcgtgacgtcggactcgccgcagcggactttcgtcccggacgacggcgagctgtccgggaagtccgcgaggttcagcaaccccgacgcgagcccgccgtcccctctctacgccgcggcgcgcgcggggacgagcggcttctcgtaccggctcagctacgctgccgacgcggcgcccgacggcaacaccacgctcgtcctccgcctccacttcttccccttcgcgtcgcagtccggcgacctcctctcggcgcggttcagcgtctcggccatggggaggtacgtcctcctgcctccttccttctcgccgccgcgcgccggcgtggtgagggagttcctcctcccgtccgatggctccggcgagttcgacgtcgccttcacgcccgaatcaggggggctcgccttcgtcaacgccatcgagctgttccccgcgccgcaggagcttctgtggaagttccccctgacggcggtcaacaccgacgtctcgccgtcgcatcaggcgctggagacgctgtaccggctcaacgtcggcgggccaacggtgacgccgacgggcgacaccatgtggcgaacatggctccccgacgactcctacctctccccggcgacggtctcggcggtggccagcatccagggccagatcatcttcgaccgggcgcagggctacacgcagatggtcgcgccggacgccgtgtacaagtcgcagcgcacgacgaactcgaccacgtcgaacgtgacatggacgttcgccgtcgacggcaacagcagctacgtcgtccgcctccacttctgcgccttcgaggagctcagctccgtcatcggagaaggcgtcgatttcaatgtttatctgatgcaagccatgggtacccgggaattgaaggccaaggactacgcgacgctgagcagtccgacccaagctttctacatggactatgtcgccgtggtcccgaccgccggcgagaacctcacggtgagcatcggcagggcggcgagcagcgacagcaagaaggcgatactgaacgggctggagatcatgaagctcagagccgttgatatgactccggcgagctcgtccggcaagacgagcaaggtcgtcgtcgtagccgtgaccgcggcggtgctcggcgcggcggttctagcaggtgtggcattgtgcgtactgcttgtgcggcggagacagcggcgggcgacgctgcctgtgccggaggaggaggagaaggagagcgtggggacgccgtggtcgccgttcacgccggacggcgagggctcgttcggcagcgccgtggtcacgccgcggaggatgaacatgaagctccacatcccgctcgccgagatcatggtggcgacgggggacttcgacgacgcaaacatcctcggcgtcggcgggttcgggaacgtgtaccgcggcgtgctccgcgacggcacccgcgtcgccgtgaagcgcgccaagcgcgcgtccaggcaggggttcccggagttccagactgagatcctggtgctctccagcatccgccaccgccacctcgtctcgctcatcggctactgcaacgagcggtcggagatgatcctcgtgtacgagctcatggcgcacggcaccctgaggagccacctgtacggctccgacgccgcggcggcgacgccgccgccgctgtcgtggaagcagcggctggagatctgcatcggcgcggcgaaggggctccactacctgcacaccggccactccgataacatcatccaccgcgacgtcaagtcgacgaacatcctcctcggcgacggcttcgtggcgaaggtggccgacttcgggctgtcccgcgtcgggccatcgacggggcagacgcacgtgagcacggcggtgaagggcagcttcggctacctcgacccggagtacttcaagacgcggcagctcaccgaccgctccgacgtctactccttcggcgtcgtcctcttcgaggtgctgtgcgcgcggccggcgatcgaccagagcctcccgcccgacgagatcaacctcgcggagtgggcgatgcagtggagccggaggggccggttcgacaagatcgtcgacccggccgtcgccggcgacgccagcacgaactcgctccggaagttcgcggagaccgccgggaggtgcctcgcggactacggcgagcagcggccgtccatgggcgacgtggtgtggaacctcgagtactgcctccagctgcaggagagccagccgagcaccgagacggcgctggacttggacgacagcggcgcgcacctgccacgggacatcgtcgtggcgaggcgagtggcgccgctcgcgcccgatgcttcggcggacgccgccggagacgacatgagctggtcggagacggcgagcttcacggcgacgggcaacgtgttctcgcagattatgtcccgcgatggtagatga</cdnaseq>

Protein Sequence

<aaseq>MAAIVLLLFLVVGLMPVSNGQTTPFSPRFSVYLACGAGGNVVVT SDSPQRTFVPDDGELSGKSARFSNPDASPPSPLYAAARAGTSGFSYRLSYAADAAPDG NTTLVLRLHFFPFASQSGDLLSARFSVSAMGRYVLLPPSFSPPRAGVVREFLLPSDGS GEFDVAFTPESGGLAFVNAIELFPAPQELLWKFPLTAVNTDVSPSHQALETLYRLNVG GPTVTPTGDTMWRTWLPDDSYLSPATVSAVASIQGQIIFDRAQGYTQMVAPDAVYKSQ RTTNSTTSNVTWTFAVDGNSSYVVRLHFCAFEELSSVIGEGVDFNVYLMQAMGTRELK AKDYATLSSPTQAFYMDYVAVVPTAGENLTVSIGRAASSDSKKAILNGLEIMKLRAVD MTPASSSGKTSKVVVVAVTAAVLGAAVLAGVALCVLLVRRRQRRATLPVPEEEEKESV GTPWSPFTPDGEGSFGSAVVTPRRMNMKLHIPLAEIMVATGDFDDANILGVGGFGNVY RGVLRDGTRVAVKRAKRASRQGFPEFQTEILVLSSIRHRHLVSLIGYCNERSEMILVY ELMAHGTLRSHLYGSDAAAATPPPLSWKQRLEICIGAAKGLHYLHTGHSDNIIHRDVK STNILLGDGFVAKVADFGLSRVGPSTGQTHVSTAVKGSFGYLDPEYFKTRQLTDRSDV YSFGVVLFEVLCARPAIDQSLPPDEINLAEWAMQWSRRGRFDKIVDPAVAGDASTNSL RKFAETAGRCLADYGEQRPSMGDVVWNLEYCLQLQESQPSTETALDLDDSGAHLPRDI VVARRVAPLAPDASADAAGDDMSWSETASFTATGNVFSQIMSRDGR</aaseq>

Gene Sequence

<dnaseqindica>93..2627#attctccatggacgagtaggtagctctcgtgagcttaatttacagcgcgattgccgtcgccggtgcccgccacacctctcggagttgtgcggatggctgcgatcgttttgctgctcttccttgtcgtgggcttgatgccggtttccaatgggcagacgacgcccttctccccgcgattctccgtctacctcgcgtgcggcgccggcgggaacgtcgtcgtgacgtcggactcgccgcagcggactttcgtcccggacgacggcgagctgtccgggaagtccgcgaggttcagcaaccccgacgcgagcccgccgtcccctctctacgccgcggcgcgcgcggggacgagcggcttctcgtaccggctcagctacgctgccgacgcggcgcccgacggcaacaccacgctcgtcctccgcctccacttcttccccttcgcgtcgcagtccggcgacctcctctcggcgcggttcagcgtctcggccatggggaggtacgtcctcctgcctccttccttctcgccgccgcgcgccggcgtggtgagggagttcctcctcccgtccgatggctccggcgagttcgacgtcgccttcacgcccgaatcaggggggctcgccttcgtcaacgccatcgagctgttccccgcgccgcaggagcttctgtggaagttccccctgacggcggtcaacaccgacgtctcgccgtcgcatcaggcgctggagacgctgtaccggctcaacgtcggcgggccaacggtgacgccgacgggcgacaccatgtggcgaacatggctccccgacgactcctacctctccccggcgacggtctcggcggtggccagcatccagggccagatcatcttcgaccgggcgcagggctacacgcagatggtcgcgccggacgccgtgtacaagtcgcagcgcacgacgaactcgaccacgtcgaacgtgacatggacgttcgccgtcgacggcaacagcagctacgtcgtccgcctccacttctgcgccttcgaggagctcagctccgtcatcggagaaggcgtcgatttcaatgtttatctgatgcaagccatgggtacccgggaattgaaggccaaggactacgcgacgctgagcagtccgacccaagctttctacatggactatgtcgccgtggtcccgaccgccggcgagaacctcacggtgagcatcggcagggcggcgagcagcgacagcaagaaggcgatactgaacgggctggagatcatgaagctcagagccgttgatatgactccggcgagctcgtccggcaagacgagcaaggtcgtcgtcgtagccgtgaccgcggcggtgctcggcgcggcggttctagcaggtgtggcattgtgcgtactgcttgtgcggcggagacagcggcgggcgacgctgcctgtgccggaggaggaggagaaggagagcgtggggacgccgtggtcgccgttcacgccggacggcgagggctcgttcggcagcgccgtggtcacgccgcggaggatgaacatgaagctccacatcccgctcgccgagatcatggtggcgacgggggacttcgacgacgcaaacatcctcggcgtcggcgggttcgggaacgtgtaccgcggcgtgctccgcgacggcacccgcgtcgccgtgaagcgcgccaagcgcgcgtccaggcaggggttcccggagttccagactgagatcctggtgctctccagcatccgccaccgccacctcgtctcgctcatcggctactgcaacgagcggtcggagatgatcctcgtgtacgagctcatggcgcacggcaccctgaggagccacctgtacggctccgacgccgcggcggcgacgccgccgccgctgtcgtggaagcagcggctggagatctgcatcggcgcggcgaaggggctccactacctgcacaccggccactccgataacatcatccaccgcgacgtcaagtcgacgaacatcctcctcggcgacggcttcgtggcgaaggtggccgacttcgggctgtcccgcgtcgggccatcgacggggcagacgcacgtgagcacggcggtgaagggcagcttcggctacctcgacccggagtacttcaagacgcggcagctcaccgaccgctccgacgtctactccttcggcgtcgtcctcttcgaggtgctgtgcgcgcggccggcgatcgaccagagcctcccgcccgacgagatcaacctcgcggagtgggcgatgcagtggagccggaggggccggttcgacaagatcgtcgacccggccgtcgccggcgacgccagcacgaactcgctccggaagttcgcggagaccgccgggaggtgcctcgcggactacggcgagcagcggccgtccatgggcgacgtggtgtggaacctcgagtactgcctccagctgcaggagagccagccgagcaccgagacggcgctggacttggacgacagcggcgcgcacctgccacgggacatcgtcgtggcgaggcgagtggcgccgctcgcgcccgatgcttcggcggacgccgccggagacgacatgagctggtcggagacggcgagcttcacggcgacgggcaacgtgttctcgcagattatgtcccgcgatggtagatgagcagagtagtcgcctttataatgaggaatctggtggcgcacgattacaaaaggaggtcaaaagccacgacacaatggcaggaaatttttaaaatgttccaagattttggttaccttttcaatacgaatttaaatcggatttgatgccaattcgagaggattttatctgttcagtgtgagttggagttcgaatttgaatagaatttcctctcctttgccgagagcaccgctgccaggagctttgtagtaggcgcttgcccttcgggcccagataactttttttattttaagatattgattacctttcaatatgaattgaaatcgaatttgatgctaattcacgaatcacaaggaatttctctgttcagagtgagttcgagtttgaagatgaatagaagcaccgttgcctggatctttgtaggccgtggaccgttcggccgagattagttttggcccataaaaacttgaggcccatccgagggacactcataactgatctccgcgtcaccaatctcaaagcacagacaccctcttctccagttctccgcgactcctcgccgccgccgccgccgccgcctgatctccccggaatttatcgtcggagagacgagatcccggcgccctctctctgctcccacgccgtcggagtaatttctccgcgggggacccgatctccagcttcagataccgcctccaacgtctcgctcttcctgcttagatagatctcgggctccccgtacctcgtacctcctagggctaatggtaagcgggtctggaattctgtattacaagggaggtgattgcaaagcatgatttgattctgggtttatgaccaacaaattgcaggatcagaagggtttcgacggcgataggtcggagagtaggctctatgtggggaatttggattttagggtatcagagtgagttatttcttactatctcttgtgtgtttagtagcatgtattttttttcgaggtttgccttcgcattgtgcaactcttaacattatcatctggtttttgcaggtctgacattatcaagatgttttctccatttgggaagattatagctgaggatttcttgtggcacacacgcggcccgaagcgaggcgagccccgtggctatgccttcgttcaatacaccaccaaagaggtaacagcggcattcatttcttgtggcgagctgtaatgggttcttgtattctcacctttgccacctgaagtgagcatgcaggaagcacagttggcgaaggaaaagatgaacggcaggttggtctgtggacgccctgtggtggttcacctggctagtgagaagtgtttcgtggactccggaaattcccacagagcaatgaaggacaagaaactggcaggtggttcaggaagcaaatcggtacagactgaccgtgccgcgaagatagctgccataaagcacaagttgaaatccttagaggatgagggatgcagtacaaaaagaccaagatttaagtcagatgacttgccgggcagcggcaagcaatctgataaggagtgctgagatgagattgttcaggatcttcagatactcttcttgttctggtgattttgctgaaggtgctcctgactgtaaaattttagttctgttatgttagacaagtcacaggtgtaacactttatagtttatcacatttgtacaccaggctgtatcatctacctgcgattaacacgaacgatttgttggtggaaccattgtggcattctagctttttagcattaagttccagcctactatttatttgttcaactgaattgcatcatgtagtactcataattagtttattcagttttgtttaaactgttgaaattgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0534500, RefSeq:Os10g0534500