BGIOSGA029384

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Revision as of 09:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029384| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029384, complete gene.| tag = OJ1254_...")
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Gene Name

BGIOSGA029384

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029384, complete gene.

LocusTag

OJ1254_E07.22

Ensembl Transcript ID

BGIOSGA029384-TA

Ensembl Protein ID

BGIOSGA029384-PA

Length

3652

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19640106..19643757

Sequence Coding Region

19643565..19643757,19642892..19642917,19642749..19642808,19642182..19642392,19642054..19642094
,19641610..19641944,19641159..19641516,19640485..19641072,19640106..19640381

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19640106..19643757 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19640106..19643757 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAACTCGAAGCGGCTCCCGTACTCCACGGCCGGCGGCGGCGGGGGAGGAGGAGGAGGAGGGGGGAGGCGCGGCGGCGCCTCCGGCTCCGGCGTGGTGGCGCCGCTGGTGGTCCTCGTGTTCCTCTTCGTGCTCGCGCCGTCGATCTTCTTCGTCGCGCGCAATGGGGGCCACGTCCACGTCGCCTCAGATCCCAAGGATAGGGAAGGTAATCAGGAAACAGATTGGCAAAAACAACTGGCAACAAACAACCTGAAATCTATTTTGTCCAAGGAGATGATCGATGCTTTAGCTTCTAGTCAACAAGAAGCAGGCACTTTGAGTGTTGATTTTTTCAGAAAACGTGCATCTCCCTCTTGGAAAACTGATGATCTAGTCAATGACCTGAGCAATGCTAGTTTGGATGTTGATGACAAGGTTAAATCTGAAAACAGTTCTGCAGAACATGAGTTATCACTGACAGATAAAACACCCAAGGATGATACTGCTGAACATCAAGTCGATGCAGCTGCAAAAAATGCTCGAAGGAAACTAAGGGAGAAAAGGCGTGAAAAGAGGGCAATGGATTTGGTAAGGAAAGATGATGAAGCACGTGTTAAGCTGGAGAATGCTGCTATTGAACGATCAAAGGCTGTAGATTCTGCTGTCCTTGGGAAATACAGCATTTGGAGAAAAGAGAATGAGAATGAGAACTCAGATTCAACAGTTAGATTGATGAGAGACCAGATTATCATGGCACGTGTTTATTCTGTGCTTGCTAAATCAAAGAACAAGAATGATCTTTATCAAGAGCTGCAAACCAGGATCAAGGAAAGCCAGAGGGCTGTTGGAGAGGCTACTGCTGATTCTGACCTTCATCATAGTGCACCTGAGAAAGTCAGAGTAATGGGTCAACTTCTATCCAAGGCTAGAGAAGATGTGTATGATTGCAAGGCGGTTACTCAGAGACTTAGAGCTATGCTTCAGTCAGCAGATGAACAAGTCAGGAGCTTGAAGAAGCAGAGTACATTTCTTAGCCAGTTGGCTGCGAAGACAATTCCAAACAGCATTCATTGTTTGTCGATGCGCTTAACAATAGATTACTATCTCCTCCCGTTGGAGAAAAGGAAGTTCCCGAGGAGCGAGAACTTGGAAAATCCAGAGCTCTACCACTATGCACTTTTCTCAGACAATGTCTTGGCAGCATCTGTTGTTGTGAACTCAACCATAATGAATGCTAAGGAGCCTGAGAAGCATGTTTTCCATCTTGTGACTGATAAGTTGAACTTCGGAGCCATGAACATGTGGTTTTTGCTGAACCCACCTGGGAAGGCCACCATCCATGTTGAGAACGTAGATGAATTTAAGTGGTTGAACTCATCGTACTGTCCTGTTTTACGACAACTTGAGTCTGCAGCCATGAAAGAGTATTATTTCAAGGCTGACCGCCCAACCACTCTCTCTGCGGGTTCTTCAAACCTAAAGTATCGTAACCCCAAGTACCTCTCCATGCTGAACCACTTGAGATTTTATCTCCCACAGGTCTATCCAAAGTTGGATAAGATACTTTTCCTTGATGATGACATAGTCGTGCAGAAAGATTTGACAGGATTATGGGACGTTGATCTTAATGGGAAGGTCAATGGTGCAGTGGAGACCTGTGGGGAGAGTTTCCATCGTTTTGACAAGTACCTTAACTTTTCCAATCCACATATTGCTCGGAACTTTGATCCAAATGCATGTGGCTGGGCTTATGGAATGAACATCTTTGATCTGAAGGAGTGGAAGAAGAAAGATATCACTGGGATCTACCACAAGTGGCAAAGCATGAATGAAGACCGGGTTCTTTGGAAGCTTGGGACACTTCCACCTGGCCTCTTAACCTTCTACAAGTTGACGCATCCCCTTGACAAGTCGTGGCATGTCCTTGGATTAGGATACAACCCAAGCATTGATCGCTCAGAGATAGATAATGCTGCTGTTGTTCATTACAACGGTAACATGAAGCCATGGCTGGAGTTAGCAATGACCAAGTACAGACCATATTGGACAAGGTATATAAAGTATGATCACCCTTACATCCGTGGATGCAACTTGGCGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MANSKRLPYSTAGGGGGGGGGGGRRGGASGSGVVAPLVVLVFLFVLAPSIFFVARNGGHVHVASDPKDREGNQETDWQKQLATNNLKSILSKEMIDALASSQQEAGTLSVDFFRKRASPSWKTDDLVNDLSNASLDVDDKVKSENSSAEHELSLTDKTPKDDTAEHQVDAAAKNARRKLREKRREKRAMDLVRKDDEARVKLENAAIERSKAVDSAVLGKYSIWRKENENENSDSTVRLMRDQIIMARVYSVLAKSKNKNDLYQELQTRIKESQRAVGEATADSDLHHSAPEKVRVMGQLLSKAREDVYDCKAVTQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNSIHCLSMRLTIDYYLLPLEKRKFPRSENLENPELYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNLAE</aaseq>

Gene Sequence

<dnaseqindica>1..193#841..866#950..1009#1366..1576#1664..1704#1814..2148#2242..2599#2686..3273#3377..3652#ATGGCGAACTCGAAGCGGCTCCCGTACTCCACGGCCGGCGGCGGCGGGGGAGGAGGAGGAGGAGGGGGGAGGCGCGGCGGCGCCTCCGGCTCCGGCGTGGTGGCGCCGCTGGTGGTCCTCGTGTTCCTCTTCGTGCTCGCGCCGTCGATCTTCTTCGTCGCGCGCAATGGGGGCCACGTCCACGTCGCCTCAGGTTCCGGTTTGCACCCCCCCCCTCTCCCCCCCCCCCCCCTGATGTAGCATCTAGATTTTATTATTATTTTTTTGGTGGGGTGGGGACTGGGAGTGATGTCTTCAGGTTTGGTAAATTTCCCAGCGTTGGTCTCATGGATATTGCCGGAATGGAATCCGAGTAGATTTTAGTGGTACTGTTGTTAAATGCAATTGATGAGTTGTATTTACAGGGTATGGTATGATTTTGGATGAGAACTCTGTATATAGATAATTGGATCATGATGCTTTGTTTTGGAAACGCAAATAATCAATCTCACTTTGGAGAAATCATGAGTTTACAGCAGACAATTGAAGTTGTGATTCAAGTGATTTTGGAAATCATTTTCCCCTCTCTTGTAGTGTCACTTGTGCCATTGCGAGGTTAGAATGTTAGATGTGTGACATTGTGCGGAAAGCCCCAGCTATTAAGAAGCTAGGGCGCACAAGTGAATTGTGGGTGTAATTCTAGTGCCAAAAGCCCATAAACAAGAAAACTGCATTTATAAGAACTGTAGGAACATTGTCAATGTTTTGAACTGTAGGAACATTGTCAATGTTTTGTAGTATTTGAATACTGCTATACTGATTTGAAATATGTAAGTGATGTTGTATTCTGTTTACCTGCAGATCCCAAGGATAGGGAAGGTAATCAGGTATTTATCTTTTCTGGGAGCTAGTCAATTGGTTTACTAGCCTAAATTTTGAGGATCCATCTCACTTTAAAGCTTGCTTGCAGGAAACAGATTGGCAAAAACAACTGGCAACAAACAACCTGAAATCTATTTTGTCCAAGGAGGTCAGAATTGTCTTGCGACTTAGTAATATAATTTCTTATCTTTATTTTTTGGTTTCATGGAAATGTACAAGGGTACATAACAACATGCTCATCTTTGCTATGCTACTAATTTCGAAATGTCATGATCTCTGATTTGTCCTTGCAACTGATTGCCCTTTCTCTAAATACCATGCTACTCTCTATTGTTCCAAGTAGATTTGCATGCTGTGTCCTCTATCTGCTCTGTAATTCTGTTGCGAACATTTTGATTTTTCAATTACCATCTACTGTTATTTGCATAGGAAACTGTCATCTTGTTCAGAAGTATCCTCGATTTTTCTGTGCTTTTAGTCTTATGCATACCTTTTGGTCTCCAGATGATCGATGCTTTAGCTTCTAGTCAACAAGAAGCAGGCACTTTGAGTGTTGATTTTTTCAGAAAACGTGCATCTCCCTCTTGGAAAACTGATGATCTAGTCAATGACCTGAGCAATGCTAGTTTGGATGTTGATGACAAGGTTAAATCTGAAAACAGTTCTGCAGAACATGAGTTATCACTGACAGATAAAACACCCAAGGATGATACTGGTATAAAAATAACCATGACTTTTTTGAAAAGCACATTTCACACAATCCGATTAGGTACTCAAGAAAATATACTTCTTTTCTGTGCAGCTGAACATCAAGTCGATGCAGCTGCAAAAAATGCTCGAAGGGTAAGCATGCTGGTCTTCTTGTATGTACATTGATACATTGTTGTTTGTTTCTATCGATATCCATTTCTTATGACCTAATACTTCCCTTGATATGTTTTGGTCGCTAAAGAAACTAAGGGAGAAAAGGCGTGAAAAGAGGGCAATGGATTTGGTAAGGAAAGATGATGAAGCACGTGTTAAGCTGGAGAATGCTGCTATTGAACGATCAAAGGCTGTAGATTCTGCTGTCCTTGGGAAATACAGCATTTGGAGAAAAGAGAATGAGAATGAGAACTCAGATTCAACAGTTAGATTGATGAGAGACCAGATTATCATGGCACGTGTTTATTCTGTGCTTGCTAAATCAAAGAACAAGAATGATCTTTATCAAGAGCTGCAAACCAGGATCAAGGAAAGCCAGAGGGCTGTTGGAGAGGCTACTGCTGATTCTGACCTTCATCATAGGTGTTATATCTGTGATCTGATATCTTATCTATTTTCACTTCATATCTGATATCTTATCTTGTTCTCCATCGTGACAAATAATGTACTTTGCAGTGCACCTGAGAAAGTCAGAGTAATGGGTCAACTTCTATCCAAGGCTAGAGAAGATGTGTATGATTGCAAGGCGGTTACTCAGAGACTTAGAGCTATGCTTCAGTCAGCAGATGAACAAGTCAGGAGCTTGAAGAAGCAGAGTACATTTCTTAGCCAGTTGGCTGCGAAGACAATTCCAAACAGCATTCATTGTTTGTCGATGCGCTTAACAATAGATTACTATCTCCTCCCGTTGGAGAAAAGGAAGTTCCCGAGGAGCGAGAACTTGGAAAATCCAGAGCTCTACCACTATGCACTTTTCTCAGACAATGTCTTGGCAGCATCTGTTGTTGTGAACTCAACCATAATGAATGCTAAGGTAGTTTCTGTCTTCCTCTTTAATCAAATGCAAACTGTGATAAGTGATAAGTGTTCTGACAACTATGTATGGCATAACCTTTTCAGGAGCCTGAGAAGCATGTTTTCCATCTTGTGACTGATAAGTTGAACTTCGGAGCCATGAACATGTGGTTTTTGCTGAACCCACCTGGGAAGGCCACCATCCATGTTGAGAACGTAGATGAATTTAAGTGGTTGAACTCATCGTACTGTCCTGTTTTACGACAACTTGAGTCTGCAGCCATGAAAGAGTATTATTTCAAGGCTGACCGCCCAACCACTCTCTCTGCGGGTTCTTCAAACCTAAAGTATCGTAACCCCAAGTACCTCTCCATGCTGAACCACTTGAGATTTTATCTCCCACAGGTCTATCCAAAGTTGGATAAGATACTTTTCCTTGATGATGACATAGTCGTGCAGAAAGATTTGACAGGATTATGGGACGTTGATCTTAATGGGAAGGTCAATGGTGCAGTGGAGACCTGTGGGGAGAGTTTCCATCGTTTTGACAAGTACCTTAACTTTTCCAATCCACATATTGCTCGGAACTTTGATCCAAATGCATGTGGCTGGGCTTATGGAATGAACATCTTTGATCTGAAGGAGTGGAAGAAGAAAGATATCACTGGGATCTACCACAAGTGGCAAAGCATGGTGAGACTACTACTTTCATTATTGGATCACATTGATTTAGAGAAGAAACTGTAATGCAACATGATTTAGTCTAACATTATTCTTGCTATTTTTCTTCTAACAGAATGAAGACCGGGTTCTTTGGAAGCTTGGGACACTTCCACCTGGCCTCTTAACCTTCTACAAGTTGACGCATCCCCTTGACAAGTCGTGGCATGTCCTTGGATTAGGATACAACCCAAGCATTGATCGCTCAGAGATAGATAATGCTGCTGTTGTTCATTACAACGGTAACATGAAGCCATGGCTGGAGTTAGCAATGACCAAGTACAGACCATATTGGACAAGGTATATAAAGTATGATCACCCTTACATCCGTGGATGCAACTTGGCGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029384

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