BGIOSGA029385

From RiceWiki
Revision as of 09:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029385| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029385, complete gene.| tag = OsI_321...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029385

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029385, complete gene.

LocusTag

OsI_32146

Ensembl Transcript ID

BGIOSGA029385-TA

Ensembl Protein ID

BGIOSGA029385-PA

Length

3420

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19634566..19637985

Sequence Coding Region

19637832..19637985,19637163..19637188,19637024..19637083,19636478..19636667,19636339..19636379
,19636194..19636234,19635908..19636108,19635716..19635833,19634915..19635502
,19634566..19634814

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19634566..19637985 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19634566..19637985 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAACTCGAAGCGGCTCCCGTACTCCACGGCCGGCGGCGGCGGAGGAGGGAGGCGCGGCGTGGTGGCGCCGCTGGTGGTCGTCGTGTTCCTCTTCGTTCTCGCGCCGTCGATCTTCTTCGTCGCGTGCAATGGGGGCCACGTCGGCTCAGATCCCATGGATATGGAAGGTACTCAGGAAACAGAATGGCAAAAACAGCTGCCAACGAACAACCTGAAATCTATTTTGTCCAAGGAGATGTTTGATGCTTTAGCTTCTAGTCAACAAGAAGCAGGGGCTTTGAGTGTTGATTTTTTCATAAAACGTGCATCTCCCTCTTGGAAAACTGATGATCTAGTCAATGACCTGAGCAATGCGAGTTTGGATATTGATGACAAGGTTAAATCTGCAAACAGCTCTACAGATAAAACACTCAAGGATGATACTGATGAACATCAAGTCGACACGGCTGCAAAAAATGTTCGAAGGAAACTAAGGGAGAAAAGGCGTGAAAAGAGGGCAATGGATTTCATTTGGAGAAAGGAGAATGAGAATGAGAACTCAGATTTGACAGTTAGATTGATGAGAGACCAGATTATTATGGCACGTGTTTATTCTGTGCTTGCTAAATCAAAGAACAAGAATGATCTTTATCAAGAGCTGCAAACCAGGATCAAGGAAAGCCAGCGGGCTGTTGGAGAGGCTACTGCTGATTCTGACCTTCATCATAGTGCACCTGAGAAAGTCAGAGTAATGGGTCAACTTCTATCCAAGGCTAGAGAAGATGTGTATGATTGCAAGGCGGTTACTCAGAGACTTAGAGCTATGCTTCAGTCAGCAGATGAACAAGAGCCTGAGAAGCATGTTTTCCATCTTGTGACTGATAAGTTGAACTTTGGAGCCATGAACATGTGGTTTTTGCTGAACCCTCCTGGGAAGGCCACCATCCATGTTGAGAACGTAGATGAATTTAAGTGGTTGAACTCATCATACTGTCCTGTTTTACGGCAACTTGAGTCTGCAGCCATGAAAGAGTATTATTTCAAAGCTGACCGCCCCACCACTCTCTCTGCGGGTTCTTCAAACCTAAAGTATCGTAACCCCAAGTACCTCTCCATGCTGAACCACTTGAGATTTTATCTCCCACAGGTCTATCCAAAGTTGGATAAGATATTTTTCCTTGATGATGACATAGTCGTGCAGAAAGATTTGACGGGATTATGGGATGTTGATCTTAATGGGAAGGTCACCGGTGCAGTGGAGACCTGTGGGGAGAGTTTTCATCGTTTTGATAAGTATCTTAACTTTTCAAATCCACATATCGCTCGGAACTTCGATCCAAATGCATGTGGCTGGGCATATGGAATGAACATCTTTGATCTGAACGAGTGGAAGAAGAAAGATATCACTGGGATCTACCACAGGTGGCAAAACATGAACGAAGACCGGGTTCTTTGGAAGCTTGGGACACTTCCACCCGGCCTCTTGACCTTCTTCAAGTTGACGCATCCCCTTGACAAGTCGTGGCATGTCCTCGGATTAGGATACAACCCAAGCATTGACCGCTCAGAGATAGATAATGCAGCCGTTGTTCATTACAACGGTAACATGAAGCCATGGCTGGAGTTGGCAATGACCAAGTATGACCAAGTACAGACCATATTGGACAAGGTATATAAAGTATGA</cdnaseq>

Protein Sequence

<aaseq>MANSKRLPYSTAGGGGGGRRGVVAPLVVVVFLFVLAPSIFFVACNGGHVGSDPMDMEGTQETEWQKQLPTNNLKSILSKEMFDALASSQQEAGALSVDFFIKRASPSWKTDDLVNDLSNASLDIDDKVKSANSSTDKTLKDDTDEHQVDTAAKNVRRKLREKRREKRAMDFIWRKENENENSDLTVRLMRDQIIMARVYSVLAKSKNKNDLYQELQTRIKESQRAVGEATADSDLHHSAPEKVRVMGQLLSKAREDVYDCKAVTQRLRAMLQSADEQEPEKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLDKIFFLDDDIVVQKDLTGLWDVDLNGKVTGAVETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLNEWKKKDITGIYHRWQNMNEDRVLWKLGTLPPGLLTFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYDQVQTILDKVYKV</aaseq>

Gene Sequence

<dnaseqindica>1..154#798..823#903..962#1319..1508#1607..1647#1752..1792#1878..2078#2153..2270#2484..3071#3172..3420#ATGGCGAACTCGAAGCGGCTCCCGTACTCCACGGCCGGCGGCGGCGGAGGAGGGAGGCGCGGCGTGGTGGCGCCGCTGGTGGTCGTCGTGTTCCTCTTCGTTCTCGCGCCGTCGATCTTCTTCGTCGCGTGCAATGGGGGCCACGTCGGCTCAGGTTCCGGTTTGCATCCCCCTCCCCCCTCCTGATGCGCGGCGCTGTCGGTTGTTAATCGCATCCTCCGTCGCGAATGTAGCATCTAGATTGTTTTTTTTAAGGTGGGGGTGGGGACTGGGGAGTGATGTGTTCAGGTTTGGTTAGTTTCCCAGCGTTGGTCTGAGGGATATTACTCGGAATGGAATCCGAGTAGATGTCAGTGGTTTAGGTACTATTGTTAAATTCAATTGATGAGTTGTATTAGTAGGCTTGGTTATGATTTTGGATAGAAAACGTAGATAATTGGATCATGATGCTCTGTTTTGGAAACAAAAATTAATCCATCGCACTTTGAAGGAATCATGAGTTTACAGCAGACAGTTGAAGTTGTGATTCAAGTGATTTTGGAAACCATTTTCCTATCTATTGTAGTGTCACTTGTGCCTTTGCTAGGTTAGATGTGTGACATTGTGGGGAAAGCCCTAGCTATTAAGAATCTAGGGTGCACAAGTGAATTGTGGATGTAATTGTAGTGCCAAAAGCCTATAAACAAGAAAACTACATTTATTAGAACTGTAGGAACATTGTCAATGTTTTGTAGTATTTGAATACTGTTATACTGATTTGAAATAGATAAGTGATGTTGTAGTTTGTTTACCTGCAGATCCCATGGATATGGAAGGTACTCAGGTATTTTTCCATTCTGGGAGCTAGTTAATTGCTTAGCCTAAATTTTGAGGATCCATCTCACATTAAAGCTTTCTTGCAGGAAACAGAATGGCAAAAACAGCTGCCAACGAACAACCTGAAATCTATTTTGTCCAAGGAGGTCAGAATTGTCTCGCGACTTAGTAATATAATTTCTTATCTTTCTTTTTTGGTTTCATGGAAATGTACAAGGGTACATAACAACGTGCTCATCTTTGCTATGCTACTAATTTCGCAACGTCATCCTCTCTGATTTGTCCTTGCAACTGATTGCCTTTTCTCTAAATACCATGCTACTCTCTGTTGTTCCAAGTAGATTTGCATGCTGTGTCCCCTATCTGCTCTGTAATTCTGTTGTGGACATTTTGATTTTTCAATTACCATCTACTGTTATTTGCATAAGAAACTGTCTTCTTGTTCAGAAGTATCCTCAATTTTTCTGTTCTTTTAGTCTTATACATGCCTTCTGGTCTCCAGATGTTTGATGCTTTAGCTTCTAGTCAACAAGAAGCAGGGGCTTTGAGTGTTGATTTTTTCATAAAACGTGCATCTCCCTCTTGGAAAACTGATGATCTAGTCAATGACCTGAGCAATGCGAGTTTGGATATTGATGACAAGGTTAAATCTGCAAACAGCTCTACAGATAAAACACTCAAGGATGATACTGGTACAAAAATAACCATGCTTTTTTTTAAAAAAAGCACATTTTAAATTTTTACATCGTCTGATTAGGTATGCAAGAAAATAAACTTCTTGTCTGTGCAGATGAACATCAAGTCGACACGGCTGCAAAAAATGTTCGAAGGGTAAGAATGCTGATCTTCTTGTATGTACATTGATGCATTGTTATTTGTTTCTATCGTATGCATTATGACATCATTCATCCCTTGATACTGTTTGGTCACTAAAGAAACTAAGGGAGAAAAGGCGTGAAAAGAGGGCAATGGATTTGTAAGGAAAGATGATGAAGCACGTGTTAAGCTGGAGAATGCTGCTATTGATCGATCAAAGATTCTGCTGTCCTTGGGAAATACAGCATTTGGAGAAAGGAGAATGAGAATGAGAACTCAGATTTGACAGTTAGATTGATGAGAGACCAGATTATTATGGCACGTGTTTATTCTGTGCTTGCTAAATCAAAGAACAAGAATGATCTTTATCAAGAGCTGCAAACCAGGATCAAGGAAAGCCAGCGGGCTGTTGGAGAGGCTACTGCTGATTCTGACCTTCATCATAGGTTTGTGCCTATTTTCACGTCATATTTTTATATCTCATCTTGTTCTCTATCATGACAAATAATGTACTTTGCAGTGCACCTGAGAAAGTCAGAGTAATGGGTCAACTTCTATCCAAGGCTAGAGAAGATGTGTATGATTGCAAGGCGGTTACTCAGAGACTTAGAGCTATGCTTCAGTCAGCAGATGAACAAGTCAGGAGCTTGAAGAAGCAGAGTACATTTCTTAGCCAGTTGGCTGCGAAGACAATTCCAAACAGCATTCATTGTTTGTCGATGCGCTTAACAATAGATTACTATCTCCTCCCGTTGGAGAAAAGGAAGTTCCCGAGGAGCGAGAACTTGGAAAATCCAGAGCTCTACCATTATGCACTTTTCTAACAGCTATCTATGGCATAATCTTTTCAGGAGCCTGAGAAGCATGTTTTCCATCTTGTGACTGATAAGTTGAACTTTGGAGCCATGAACATGTGGTTTTTGCTGAACCCTCCTGGGAAGGCCACCATCCATGTTGAGAACGTAGATGAATTTAAGTGGTTGAACTCATCATACTGTCCTGTTTTACGGCAACTTGAGTCTGCAGCCATGAAAGAGTATTATTTCAAAGCTGACCGCCCCACCACTCTCTCTGCGGGTTCTTCAAACCTAAAGTATCGTAACCCCAAGTACCTCTCCATGCTGAACCACTTGAGATTTTATCTCCCACAGGTCTATCCAAAGTTGGATAAGATATTTTTCCTTGATGATGACATAGTCGTGCAGAAAGATTTGACGGGATTATGGGATGTTGATCTTAATGGGAAGGTCACCGGTGCAGTGGAGACCTGTGGGGAGAGTTTTCATCGTTTTGATAAGTATCTTAACTTTTCAAATCCACATATCGCTCGGAACTTCGATCCAAATGCATGTGGCTGGGCATATGGAATGAACATCTTTGATCTGAACGAGTGGAAGAAGAAAGATATCACTGGGATCTACCACAGGTGGCAAAACATGGTGAGATTACTACTTCCATGATTGGATCTCATTGATTTAGAGATGTCATGCAAAACGATTTACTCTAACATCAATGTTGCTTTTTTTTTTCTTCTAACAGAACGAAGACCGGGTTCTTTGGAAGCTTGGGACACTTCCACCCGGCCTCTTGACCTTCTTCAAGTTGACGCATCCCCTTGACAAGTCGTGGCATGTCCTCGGATTAGGATACAACCCAAGCATTGACCGCTCAGAGATAGATAATGCAGCCGTTGTTCATTACAACGGTAACATGAAGCCATGGCTGGAGTTGGCAATGACCAAGTATGACCAAGTACAGACCATATTGGACAAGGTATATAAAGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029385