BGIOSGA029407

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Revision as of 09:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029407| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029407, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA029407

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029407, complete gene.

LocusTag

OSJNBA0047P18.33

Ensembl Transcript ID

BGIOSGA029407-TA

Ensembl Protein ID

BGIOSGA029407-PA

Length

6620

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19317089..19323708

Sequence Coding Region

19323482..19323708,19323174..19323318,19321856..19321944,19321498..19321537,19321194..19321251
,19321047..19321107,19320447..19320525,19320131..19320265,19319858..19320055
,19319602..19319682,19319432..19319532,19319081..19319198,19318768..19318800
,19318385..19318478,19318194..19318282,19317853..19317971,19317614..19317669
,19317089..19317522

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19317089..19323708 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19317089..19323708 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCTCGCCGCCGCCGCCGCCGTGCCGCTCGCTCTTCCCGTCCCCTCCTCCTCCTCCTCGCTCTCCTCGCCGCGGCCGTCAACAACTTCGCGCCCGCCGGCGGAGTGGAAGTCCTCGCCAAGTCCCGCCTGGAGAGCTGCGCCCGCGGCGGCTCGGACGACGGCGCGACCGCCTCACCTGCGACAGCAAGATCGTCGTCGACCTGGCCGTGCCCAGTGGCTCGCGGCGGGGAGGCGTCGCTGGTGGCGCGGGTGGCGGAGGTGGAGGAGAACGGCACGGAGGCGGGGGAGATGCCCATCCTGGATCCCCTCATCATCACCATCAACAAATCCGAGGTGTATGCGCTCTACGATCTCACTTACCTCAGGGATGTTGCTTACATACCTGAAGAAAAATATGTGAAGACACGTAAATGTGAGCCTGAAGCTGGTGCGAACGTTGTCAAATCTTGTGAAAGGTTACGGGATGAGAAAGGTAGCATAATTGAGCATACAGAACCTGTTTGCTGCCCTTGTGGGCCTCACCGCCGTGTCCCTTCATCTTGTGGAAACATTTTTGATAAAGTGGCGAAAGGAAAAGCTAACACAGCTCACTGTCTACGTTTTCCAGATGATTGGTTTCATGTTTTTGATATTGGGAGAAGATCCCTTTGGTTCAGTATCAGAGTGCAAGTAAAGAAAGGATCTTCTGAATCTGAGGTTATTGTTGGTCCAGAAAATAGAACAGTTGTTTCTGAAGACAGCTCCCTGAGAGTAAATTTAGTTGGCGACTTTGCTGGTTATACAAGTCTTCCATCTTTGGAGAACTTCTACCTTGTGACTCCACGAAAGGGTGTTGGCGGTGGTCAACTACAAGTGCTTGGTGATGACTTTTCCAGGTGGATGCTGTTGGAGAGAGTCCTGTTTACATTAGATGGTCTTGAATGTAATAAGATTGGAGTTGGCTATGAAGCTTTCAGGAGCCAGCCTAACTTTTGTTCATCGCCACTTGACAGCTGCTTGGGCGATCAGCTTTCCAAATTTTGGGAGATTGACAAAAACAGGGTAAACAATAGCCAACCACCCCAATACGTTGTTCTGGGAAAGTTTGAAAGGATCAACCAATATCCGAATGCAGGAGTTCATACCTTTTCTGTGGGAATCCCAGAAGTTCTCAATACCAATTTGATGATAGAGCTGAGTGCTGATGACATAGAATATGTCTATCAGAGAAGCTCAGGGAAGATAATTAGCATTAACATCTCTTCGTTTGAAGCCTTAAGTCAAGTTGGCAGTGCTAGAGTCAAAACCAAGAATATTGGAAGACTTGAAGCTTCATATAGCTTGACGTTTGACTGCTTAAGCGGCATCAATCCCGTTGAGGAGCAGTACTTTATCATGAAGCCTGATGAAAAGCTTATTCGGACATTTGATTTGCGTTCGTCAACAGACCAAGCATCGAACTATACATGTCAAGCTATTTTGAAGGCGTCAGATTTCAGTGAACTTGACAGAAAAGAATCCCAATTCTCAACCACAGCTACAGTTCTTAACAATGGAACACAGATTGGTTCGTCCGAAAACCACACAAAGGGTGGCATCTGGGGTTTCTTTGAAGCCATCAAAGCCTGGTGCGCCAAAATGTGGCACATGCTGATTAATTTCTTCACTGGTACAACATGCAGCACGAGATGCTGGAGCTTCCTCAAGTTCGTCATCCACGGCCTGCTACTTGTCGCAGTCCTGTGGCTTCTGCACCGGAAAGGGCTCTTCGATCCACTGTACTATTGGTGGGACGGCGTGGTCGGGTCGGAGGCGCAGGAGCGCGCGCGCCGGAGGCACAAGAGAGCCCACAGCCACAGGCACTCCCACCACCACGACGCGCACAAGAGGCACAAGACCGAGCTTGCCGGCCACCGCCGCCACCACGTCCTCCACATACATGACGACGACGACCCGGTGGCGGCGGCGGCGGAGCACGTCATCCTCCGCCGGCACGGCAGGCACGAGGCGGCGCTCGGCGTGCAGCACAGGGACGGGCTCAAGCTCAACAAGCACCGGCGCCACGGTGGCAAGGCGGTTGAGCTACTGCCGCCGGGGGAGATCATCGTCCGGGACGGTGGCGGCTGCGGCGGCGTGGAGCACGGTGATCGGAGGCACCACGCGTGGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MEPRRRRRRAARSSRPLLLLLALLAAAVNNFAPAGGVEVLAKSRLESCARGGSDDGATASPATARSSSTWPCPVARGGEASLVARVAEVEENGTEAGEMPILDPLIITINKSEVYALYDLTYLRDVAYIPEEKYVKTRKCEPEAGANVVKSCERLRDEKGSIIEHTEPVCCPCGPHRRVPSSCGNIFDKVAKGKANTAHCLRFPDDWFHVFDIGRRSLWFSIRVQVKKGSSESEVIVGPENRTVVSEDSSLRVNLVGDFAGYTSLPSLENFYLVTPRKGVGGGQLQVLGDDFSRWMLLERVLFTLDGLECNKIGVGYEAFRSQPNFCSSPLDSCLGDQLSKFWEIDKNRVNNSQPPQYVVLGKFERINQYPNAGVHTFSVGIPEVLNTNLMIELSADDIEYVYQRSSGKIISINISSFEALSQVGSARVKTKNIGRLEASYSLTFDCLSGINPVEEQYFIMKPDEKLIRTFDLRSSTDQASNYTCQAILKASDFSELDRKESQFSTTATVLNNGTQIGSSENHTKGGIWGFFEAIKAWCAKMWHMLINFFTGTTCSTRCWSFLKFVIHGLLLVAVLWLLHRKGLFDPLYYWWDGVVGSEAQERARRRHKRAHSHRHSHHHDAHKRHKTELAGHRRHHVLHIHDDDDPVAAAAEHVILRRHGRHEAALGVQHRDGLKLNKHRRHGGKAVELLPPGEIIVRDGGGCGGVEHGDRRHHAWH</aaseq>

Gene Sequence

<dnaseqindica>1..227#391..535#1765..1853#2172..2211#2458..2515#2602..2662#3184..3262#3444..3578#3654..3851#4027..4107#4177..4277#4511..4628#4909..4941#5231..5324#5427..5515#5738..5856#6040..6095#6187..6620#ATGGAGCCTCGCCGCCGCCGCCGCCGTGCCGCTCGCTCTTCCCGTCCCCTCCTCCTCCTCCTCGCTCTCCTCGCCGCGGCCGTCAACAACTTCGCGCCCGCCGGCGGAGTGGAAGTCCTCGCCAAGTCCCGCCTGGAGAGCTGCGCCCGCGGCGGCTCGGACGACGGCGCGACCGCCTCACCTGCGACAGCAAGATCGTCGTCGACCTGGCCGTGCCCAGTGGCTCGGTAATCGCGCTCGACTCTCCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCCCCCCAAATTTCTCTCCACGCCACTGTTCGTTTCGCTAACGTTTGCGGTGTGGGGGATCAGAGCGGCGGGGAGGCGTCGCTGGTGGCGCGGGTGGCGGAGGTGGAGGAGAACGGCACGGAGGCGGGGGAGATGCCCATCCTGGATCCCCTCATCATCACCATCAACAAATCCGAGGTGTATGCGCTCTACGATCTCACTTACCTCAGGGTAAACCCTCTGCTTCCTAACCTGTTGGATTCTGGTTTCTAACTAAGCGATACTGAACACCAGTTTTATGCGCGTTTTTTTCTGTGTATCATCCGTCACTTCGTGTGGCCCTCTTGATTTCTGCCTATTGACGTTTGTTGGAGTGAGATGTGGACGCTGGACAGTAATTGTGATGTTATTTTTAAGGAGCAGTGAACAAACTATTGTGTTGTATACTCTTATGTACTCCATCCTTTTCATATTATAAGTGGTTTGAACTTTTCCTAGTCAAACTTCGACCAAGTTTATAAAAAAAATATAGTAGTATTTTCAACCAAAAAATATATTATCAAAATATATTCAATGTTAGATTTAATGGAACTAATTTGACATTTTAGATGTTGCTAAATTTTTCTATAAATTTGATCAAACTTAACAAAGCTTGACTAAGAAAAAAGTCAGACGACTTATAATATGACTCGGAGGGAGTAAGTTTTAAATCAGGGCGGTTACTGACTAGGTGTTAAAATGTTTAGGTGTGGTATTCGATTTTGAGCAGAAAAGCAATATCCTGATATCTAACTTCAAAAAAGAGGGTTCAACTGCACAATCAAGTTATTCCTGATCTCAAAATTGAGTTGATGTGAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAGCAATATCCTGATATCTAACTTCAAAAAAGAGGGTTCAACTGCACAATCAAGTTATTCCTGATCTCAAAATTGAGTTGATGTGAATTTGGTTCCATCATCATTAGGGTTTGCGATATGTTCCAAGGCTCCAAGCTATATAAGTATAACATGCTTTGCTTTAGTTGGATGGTTTCTGACTAAGTGCTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCAAATTCATATTGATGTTAATGAATCTAGACAGATTCATTAACATTAATATGAATTTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTACAACAACATTGAAGATGTTCAACTTGGTCAGTGAGCTAATCTTATACTTCTTATCTGACTCTTCATAAAGAAAATTCTTTTGTGCACTCTCTGTATCTCTTTTCGGCATGTTGACTGTTAGAAAGTTCTCCTTTTTTCTGTTTGTCAAATCACTCTATTACCAAACTGGACAGATGTTATCCTTTGTGGTCTGTAACATGTATATGGTGTATCTTCAGGATGTTGCTTACATACCTGAAGAAAAATATGTGAAGACACGTAAATGTGAGCCTGAAGCTGGTGCGAACGTTGTCAAATCTTGTGAAAGGTAACTTCATTATAGGATTGCAATCTTCATCACTTTTCTTTTGGGAAGGATCCAAGTTGGTACTTGGTAGACATCACATCACAATTGCCAGTTCATCTTTCTATCTTATACCATATTTGCTGTCAAATATGGACAATATGTAATCTACTACCACTGTCGGGAATGACTTTATTTCAATAGCATACAGTTTAGTTTCACATAATTCAAGCAATCTATTTGAAACATCCTAAACCCTAAGTACGTTTTTTTGTTCATCCAATGCTTCAAATATAATAATTGTTGTATATACTGATGATGCAATCTTCCTGGATATGCTAGGTTACGGGATGAGAAAGGTAGCATAATTGAGCATACAGAAGTGAGAAGCATTTCCCCTTGTCACCCTTATTATCTCACTGTCTAAGCAGTTGAAATATTTAAATATACTAGTCTTCATATTAAGGAAAACACAGACACACCACACACCTGAAGCTCCTGACAATATACATCTGTCTGCTCAGACTCGATAGCATTATGTTGTTTGTGTTATTATTTTGACATCAGATATATTTACTATGTCTTGATGGTTACAATCTTGTCTTAATTTGCATTTGCATGGTTCTAGCCTGTTTGCTGCCCTTGTGGGCCTCACCGCCGTGTCCCTTCATCTTGTGGAAACATTTGTAAGTACCAACAGAAAAGGTTTTATGTATTCTTGATTTATCAATATAACATCACTTCACATCATTCATATCCATCTATTTTACAGTTGATAAAGTGGCGAAAGGAAAAGCTAACACAGCTCACTGTCTACGTTTTCCAGATGATTGGTATGAAATTAGTTGTGATTTACCATTGTTCTATGTAAATTACAATACTGTAAATATTAACTGATTAACTCACCTGCTGATTCTACAAATAAGCTACTGTCTAAACTATGACTTTTGGACTTGTTTCAGTTGGCAAATTATCTTATGTTTTTGTACTTCTAGAACCCATACTACTTTATAATGCTCCCTTCAGCTATGAAGACATACGATATACGATTCATGTGGAGTACATTACATTCTGGAGACCATCTGTACAAAACAGCATGCTTTTAGTTTTCATGTCTGGAAGGAGTGCACAATAGCCTAATATATTTTTGTTCTGAGATGATCGAATCTATTTTACCTTCTGTAAATACCACCATGGAAACAGGCCTTTCACATATTGAAGAAGCATATAATGATCTAATTCATTTCTTTACTTATTCTGAAGTATGGGATAAACGTGCATCCCAGCCTCTCTGTTATTATGGCTATTTTATCAGGTAATTATTTACGCAAATTTGTGTATAATTGTGTAACAGGTTTCATGTTTTTGATATTGGGAGAAGATCCCTTTGGTTCAGTATCAGAGTGCAAGTAAAGAAAGGATCTTCTGAATCTGTAAGAATTGAAATTCTGCACTGTGACTTCTGACCGTTATAAATTGTGTTCTCTTGTAGAAATATGTAAGCAAGAATTGTCATAGTTACATATATTATGGCAATGTGTTGTTTTGAACCTTGATTATGCCAAGCACTTCCCAAAATTTGGTTATCTTTGCTAAATTAGCATTACACACCAGGAGGTTATTGTTGGTCCAGAAAATAGAACAGTTGTTTCTGAAGACAGCTCCCTGAGAGTAAATTTAGTTGGCGACTTTGCTGGTTATACAAGTCTTCCATCTTTGGAGAACTTCTACCTTGTGACTCCACGAAAGGTAATCGAAAATTTTAGATAAGAATATTTCCCTCACGTGAAGTTTCATTGTGCTTCTAAATCTAAAATGTTGAAGGGTGTTGGCGGTGGTCAACTACAAGTGCTTGGTGATGACTTTTCCAGGTGGATGCTGTTGGAGAGAGTCCTGTTTACATTAGATGGTCTTGAATGTAATAAGATTGGAGTTGGCTATGAAGCTTTCAGGAGCCAGCCTAACTTTTGTTCATCGCCACTTGACAGCTGCTTGGGCGATCAGCTTTCCAAATTTTGGGAGGTAACACTAAAAAGTAGATCTGTAACTATTTCTTTTATTTCTTATTGCTACAACACTTGTGCTTTAAGTTTCCATGTTAATTTTGTTCATCATAGCATAACTGAGTACCAAGTATCTTGTTATTAAATTGTAAAACTGTTTTGGTCTTGAAAGATCATTCACCATTTTTTTTCAGATTGACAAAAACAGGGTAAACAATAGCCAACCACCCCAATACGTTGTTCTGGGAAAGTTTGAAAGGATCAACCAATATCCGGTTAAGTTCTTTCTCTTCTCTTCTTATATGCCAACATTGGATAAAGTTTTTTGATAGATACATTTACAGAATGCAGGAGTTCATACCTTTTCTGTGGGAATCCCAGAAGTTCTCAATACCAATTTGATGATAGAGCTGAGTGCTGATGACATAGAATATGTCTATCAGAGGTACTAATAATACTTTTGCATTATACGACTGAATATTTATTACCAGTAGGCACAACCTTACTTTTAAATGTATACAATTTCAGACATTATTGCACTAAACGTAAGACATGGTGGACAATTTTACACACAATTTTCTACTCTGGTGTTACATTTCAATTCATGTTGTAAATCACTAATTTATGTTCTTTGCTTAGCAGTATGTGTAATATGTTAAATTTCCTTGTTAATTTCAGAAGCTCAGGGAAGATAATTAGCATTAACATCTCTTCGTTTGAAGCCTTAAGTCAAGTTGGCAGTGCTAGAGTCAAAACCAAGAATATTGGAAGACTTGAAGCTTCATATAGCTTGACGGTATGCATCTCGTCAAGAAATTGCTGTTTGACAGGTTACTTTGTTATTTTTATTCTATTTTTTAACGAGTTCAAAAGGAGAAATTTGATTTTCTAACTGTCATGCAATTATTTTCAATCTGGAATACTTACATGTGCTGATGCATCATATGAATACTAGCGATACATTTTATCATAAAATTTTATTTTACTCTTTTATTTTTATCTAGCCATATACTAGATGTGTAACTTGCCCTTTATTTTCCTGAAATGTTAACAGTGGTTTCTCTTTTCCTTTGCAGTTTGACTGCTTAAGCGGCATCAATCCCGTTGAGGTAATGGTACTATAGTAATCACATTCTGTGATTTTGCGCACACTGTTTTTTTCCAAGCTTGTTCACTTTATTCTGAACCTTTCAAAGTATATTGAATTCATACAAGATTGAGTGTACTGCTTGAGTTTTCTAGATCTTTTTTTTTCTGAATTCTTCGTATGAGGTTGTTGTACATGATGTGTACATTTGATCATCAAGTCATCATTGTACTTAGTGCTCTAGTTATGTACTAGTCATTAAGTTTCTTCTCCTCAAGTAGTGAAGTTAGTCTGTTTTTTTCAATTTACAGGAGCAGTACTTTATCATGAAGCCTGATGAAAAGCTTATTCGGACATTTGATTTGCGTTCGTCAACAGACCAAGCATCGAACTATACATGTCAAGGTCAGTTATACATAAACTAGAGCATAGCATGTATTCTACTGTTCATAATCCTGTGTTGGAGACTTGAGACTCGACATCTGATTTCTTTCTGCGCTATTGCAGCTATTTTGAAGGCGTCAGATTTCAGTGAACTTGACAGAAAAGAATCCCAATTCTCAACCACAGCTACAGTTCTTAACAATGGAACACAGGTTGACAAATATTCATGCCTTATAATAGCCGATCTAGAATTTATTGTCCTTTTGCTTTTGTTGAAGTGCAACGAGGTAGTTTAGATCTGCATACAACCTTAGCATTGTCCGGTTACCTATTAATAAGCATTTGCCAACTTATCTTGGAGCGTGTTTGTCCAATCTAGTACCTTGAGCAATCAAACACACAAACACTCATGGTTCTTGAACACAACTTTCTAGATTGGTTCGTCCGAAAACCACACAAAGGGTGGCATCTGGGGTTTCTTTGAAGCCATCAAAGCCTGGTGCGCCAAAATGTGGCACATGCTGATTAATTTCTTCACTGGTACAACATGCAGGTGCGTCAATAAACTCCTTCCAGCCCGCACTTTCTCTTTTCTCCCTCCGATTGATGCCCATCGACAAAAGCTATATGCCATATGCAAAGACAGTGCGGCGTTTTGTATCGATATAGTAGGAAGCCATTCTTGTGCTTCATCTATGTCACATTTCTGACCTCGTAGATCATTCTCATGTGGCAGCACGAGATGCTGGAGCTTCCTCAAGTTCGTCATCCACGGCCTGCTACTTGTCGCAGGTGCTGTGTCTTCTTCATCAGGTTGATTGCATTTCCATGCGTGCTTTGCTTACCAAACGTGATAACATATGTTCCTCATTTTGGCTTTCAGTCCTGTGGCTTCTGCACCGGAAAGGGCTCTTCGATCCACTGTACTATTGGTGGGACGGCGTGGTCGGGTCGGAGGCGCAGGAGCGCGCGCGCCGGAGGCACAAGAGAGCCCACAGCCACAGGCACTCCCACCACCACGACGCGCACAAGAGGCACAAGACCGAGCTTGCCGGCCACCGCCGCCACCACGTCCTCCACATACATGACGACGACGACCCGGTGGCGGCGGCGGCGGAGCACGTCATCCTCCGCCGGCACGGCAGGCACGAGGCGGCGCTCGGCGTGCAGCACAGGGACGGGCTCAAGCTCAACAAGCACCGGCGCCACGGTGGCAAGGCGGTTGAGCTACTGCCGCCGGGGGAGATCATCGTCCGGGACGGTGGCGGCTGCGGCGGCGTGGAGCACGGTGATCGGAGGCACCACGCGTGGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029407