BGIOSGA029408

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Revision as of 09:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029408| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029408, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA029408

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029408, complete gene.

LocusTag

OSJNBA0047P18.32-1

Ensembl Transcript ID

BGIOSGA029408-TA

Ensembl Protein ID

BGIOSGA029408-PA

Length

4558

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19310936..19315493

Sequence Coding Region

19315410..19315493,19314078..19314139,19313433..19313970,19313141..19313241,19312815..19313055
,19312546..19312734,19312310..19312474,19311697..19311840,19311575..19311631
,19310936..19311049

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19310936..19315493 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19310936..19315493 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGCCGCCGCAGGAGGCGATCGACACCTTCGTCAGCATCACCGGCGCCGACGAGGCCCTCGCCGTCCGCAAGCTCGAGGAACATGGTGGCGACCTTAACACGGCAATCAATGCACATTTCAATGAAGGAGACAGTACAGTGAACAGAGCCAGTCAAAACAATATACCTGAGAGTCATGATGATATGATGGACCTGGATGGACCACTTGATAATGCATTTAGAAGATCTTTGTTCCCTGAAACTTTGCGTGACCCTTTTGCACTGATGGACACAAACTTTCAGCAAAATTATTTTGACAGAGTTGGTTCCACAGATACTTTCGGTCATGGCCCACAGGTTTCACACCCTAGAGAGGTGCGAGAGATACCTATCGAAGTTAAGGATAGCAACCCGCAAACAGGCCCTTCTGGTCAGGCCCCTATTATCGAGGATGTCACTGGGCATGAATCTTCATATGGTCCTGAAGTTCGTGGGGCTATTGTAATTGATGATGATGATGATGAGCAGCCATCTGCCCCTTCTCTTCATGCTAATATTGATAGCTCATTGCAGCCGAACCCTTCTATTCCAACTGCACCTCCATTGGTTCATGTTACTGACTATGACAATGATATCGAAGAGGAAATGATCCGGGCAGCAATTGAAGCTTCAAAAAGGGATGCTGAGGCAATGACAATTACAGCAGAGCAAGGAATAACACAGCCGCCAGAGGGAGTAAACATTACAGAACATTCTTTTGATGAAGAGGACAAGGGAACTGCAAGCGGAACAGCTGGAAGGCAAGGATTAGCTACAGAAAAGGTTGGATCATCTAGGCAACCAATAGATGAAGATACCCTCCAAGAGGAGACTGAAGATGTAGAAGAACAGCCATTAGTTAGACGTCGTTCTAGACGCATCCCTTCTGGAAACACTGAGTCAGCACAACCTGTGTACACGGTCGATAGTCCTCCCTCAAGTTCTCAGCCTCAAGGAAATTTGAATGATCGCCAGAATAATGGAGATGAATTTCCATCAGAGTGGGGTGGCATTTCTTCTGAGGAGCATGATGAAGCTGTTATGCTTGAGGCTGCAATGTTTGGTGGAATTCCAGAAGGACCCACGTATCCGTTCTCAATGCCATCTCATAGAAGCCCAAGTCTTTATCCCCGTGTAGAGCATGCTCCATCACCAGCATTAACTGAACAGCGGTTGTTACGTGAGCAGCAGGATGATGAATACCTTGCATCACTCCAAGCTGATCAAGAAAAAGAGTTGAAGGCCCTACAGGAGGCCGAGCTTCGTCGCCTGGAAGAAACTGCTGCAAGAGAAGCTGCCCTTGAAAAACAGAAGCAAGAGGAAGAGGAAAGGCGTAAAAAACAACTGGAGGAAGAGGAGCTAGAGTCCAGTCTTGCATCCAAACAAGCATCATTGCCGTCAGAGCCAGCTGCAGACGAGGAAGGTGCTGTCACACTTGTAGTCCGCATGCCTGATGGTAGTCGACAGGGGCGTCGCTTTCTGAAATCTCATAAACTTCAGTTCCTTTTTGATTTCTTAGACATTGGCAGGACTTATAAGCCAGGAACCTACAGACTGGTAAGGTCGTACCCAAGGCGTGCTTTCACCACTGGTGAGGGCGATATGTCATTTAGTGATCTGGGCCTAACAAGCAAGCAGGAAGCCTTATTTCTAGAAAAGATTACAGAATAG</cdnaseq>

Protein Sequence

<aaseq>MARPPQEAIDTFVSITGADEALAVRKLEEHGGDLNTAINAHFNEGDSTVNRASQNNIPESHDDMMDLDGPLDNAFRRSLFPETLRDPFALMDTNFQQNYFDRVGSTDTFGHGPQVSHPREVREIPIEVKDSNPQTGPSGQAPIIEDVTGHESSYGPEVRGAIVIDDDDDEQPSAPSLHANIDSSLQPNPSIPTAPPLVHVTDYDNDIEEEMIRAAIEASKRDAEAMTITAEQGITQPPEGVNITEHSFDEEDKGTASGTAGRQGLATEKVGSSRQPIDEDTLQEETEDVEEQPLVRRRSRRIPSGNTESAQPVYTVDSPPSSSQPQGNLNDRQNNGDEFPSEWGGISSEEHDEAVMLEAAMFGGIPEGPTYPFSMPSHRSPSLYPRVEHAPSPALTEQRLLREQQDDEYLASLQADQEKELKALQEAELRRLEETAAREAALEKQKQEEEERRKKQLEEEELESSLASKQASLPSEPAADEEGAVTLVVRMPDGSRQGRRFLKSHKLQFLFDFLDIGRTYKPGTYRLVRSYPRRAFTTGEGDMSFSDLGLTSKQEALFLEKITE</aaseq>

Gene Sequence

<dnaseqindica>1..84#1355..1416#1524..2061#2253..2353#2439..2679#2760..2948#3020..3184#3654..3797#3863..3919#4445..4558#ATGGCGAGGCCGCCGCAGGAGGCGATCGACACCTTCGTCAGCATCACCGGCGCCGACGAGGCCCTCGCCGTCCGCAAGCTCGAGGTGCGTACATCCCACATGCCCCCCCTCCCCGCCTTCCCCACCTCTCATCTCTCCCCTTGTAATCCCGTGCGGTAAATCGCGTGCGCGCTCGTGGAGGGGGTGCGGATTTGGGCGAGTCGGGATGGGGGCGTGGTCGCGTGGAGCTAGCTAGGTTTGTGATTCCTCCTCCTCCTCCGGGCGGGGGTTCATGCGGCGCGGCGCGGCGCGATGTGGGGGGTTGAGGTGGAGGTGTGGTGTGCGCCCGATTTGTTTTACTTGCCGTGAACTCGTGATGAATCTGTGAAGGCGCTTTTACGGAATTGAATTCGCTTGGAACAAATCTCGTGGCGTTAGCTCTGTCTGATTGCGAGCTTATCGCGCTCTGATTTTGGTGGGAGCGCGGGTTTTGGTCACGGAATCTCTGATTGATTTGGCATTGATACCATATCCCTGTTAGATTTGTAGTTCCAGTTTCATATGACTTCCTCGCGCGCATTCAAGTTGGGGCTTGTAGAGTTTGTATGAAATTCTTGTGATTGCTCATCTAGAGTGTTCAATAACTCAACTTAGGTAGTTAGGTTTTCGCAAGCTGTCAATTCATGGTTTGTCCATAGTCCCTACCATCCGGTGTGCTGGATTACTGGATCTGATATTTGGTTGTTTGATTTTAACTTGAACACAAAAAACACAGCTGGGTATAGTGCTATCTAGAATACCTTCGAATGGCCATACGCCCCTCACCTCAATCTAGCCATCCCTGTCCCTGTCTCTTCTGCTTTGCTTATCTTCTATCTAGTGTGATCTGTCCTGGGCTTAGTCGCGTGTGAGAGGAAAGGAAAAAAAAAGGTAAGTGAGCTTAGTGCAAATTCCTCAGACATGCTCTGTTGTATTATTCCCTCCGTTCCCAATTGATCATCATATTACATGAGAGCACCAAGACCAAGGAAAGCCAATAACTCTCCTGGAGTAAATACTGGACTATATTTACTCCGGTAACAAACTCAATGCATGCACCATCCCCGCTACTTCCTAGATAATAACAAAACAAGACATTGCATGTTGGTTGTAGAGGGTTGTGTGCATGGATGTATGCGGATATTTACTCCCATGCACAGATAACAAATAGACTTTGGTAATGAATACTAATATGATGATCATTTGGGTATATACCATGATTAATTAGTAAGTGAGGGAGTACCTCTGAAATGATTGTTAACTGCAATGATATTTTTCCTTTGGGTTTATCTATATTCATCTATTTATAATGGCTTACCTCATCACTGTAACTCAGGAACATGGTGGCGACCTTAACACGGCAATCAATGCACATTTCAATGAAGGAGACAGTACAGTGTACACCTTTACTATTTTCCATCCAACTTTATTTACATATAAGATTGCTTTCCATATGCCCACACTGTACTGCTAGAACTGATGAATGAGATGCTGGTGTTCTACAGGAACAGAGCCAGTCAAAACAATATACCTGAGAGTCATGATGATATGATGGACCTGGATGGACCACTTGATAATGCATTTAGAAGATCTTTGTTCCCTGAAACTTTGCGTGACCCTTTTGCACTGATGGACACAAACTTTCAGCAAAATTATTTTGACAGAGTTGGTTCCACAGATACTTTCGGTCATGGCCCACAGGTTTCACACCCTAGAGAGGTGCGAGAGATACCTATCGAAGTTAAGGATAGCAACCCGCAAACAGGCCCTTCTGGTCAGGCCCCTATTATCGAGGATGTCACTGGGCATGAATCTTCATATGGTCCTGAAGTTCGTGGGGCTATTGTAATTGATGATGATGATGATGAGCAGCCATCTGCCCCTTCTCTTCATGCTAATATTGATAGCTCATTGCAGCCGAACCCTTCTATTCCAACTGCACCTCCATTGGTTCATGTTACTGACTATGACAATGATATCGAAGAGGAAATGATCCGGGCAGCAATTGAAGCTTCAAAAAGGGATGCTGAGGCAATGACAATTGTAAGCTTGCACACCCTCATCTCCTTTGCTTTAGTCTGCCATGTGTTCTTTTCTCCCATATAAAAATGTGAATGATTAGAATGAGCTTGCTACAGCTGATCCTTTATTCGCAAGTGTATTAATTTTCCTCAACGACGCTTTTGTTAAACTTCTCTTTCATGTGCCTTACCTACTTGTTTCAAAAATGTTAGACAGCAGAGCAAGGAATAACACAGCCGCCAGAGGGAGTAAACATTACAGAACATTCTTTTGATGAAGAGGACAAGGGAACTGCAAGCGGAACAGCTGGAAGGTGAATATTAATTTTTACTAACATGCTCTTTAATCCTCTTGCTACCCAGCACTTGATCCCTTATACGTGTCCTTTCTTTTCGGAGGCAAGGATTAGCTACAGAAAAGGTTGGATCATCTAGGCAACCAATAGATGAAGATACCCTCCAAGAGGAGACTGAAGATGTAGAAGAACAGCCATTAGTTAGACGTCGTTCTAGACGCATCCCTTCTGGAAACACTGAGTCAGCACAACCTGTGTACACGGTCGATAGTCCTCCCTCAAGTTCTCAGCCTCAAGGAAATTTGAATGATCGCCAGAATAATGGAGATGAATTTCCATCAGAGGTATTCTTTTCTGTAATACTAATCTTCACCCTAAGGTTAAATTATATGTTATTCACTGTTTTCCTCTTCCTTTGGAAAAGTGGGGTGGCATTTCTTCTGAGGAGCATGATGAAGCTGTTATGCTTGAGGCTGCAATGTTTGGTGGAATTCCAGAAGGACCCACGTATCCGTTCTCAATGCCATCTCATAGAAGCCCAAGTCTTTATCCCCGTGTAGAGCATGCTCCATCACCAGCATTAACTGAACAGCGGTTGTTACGTGAGCAGCAGGTTTGATCTTTAGTTTGACCTATTTGTTGGTATATGCAATGAATTGTCATGACTGTTAATTTGATTTACAGGATGATGAATACCTTGCATCACTCCAAGCTGATCAAGAAAAAGAGTTGAAGGCCCTACAGGAGGCCGAGCTTCGTCGCCTGGAAGAAACTGCTGCAAGAGAAGCTGCCCTTGAAAAACAGAAGCAAGAGGAAGAGGAAAGGCGTAAAAAACAACTGGAGGAAGAGGTAAACCTTTCGTTAAAAATAATTATGGAATTAATTGATCATCAACAACAGTCTTTTCAATACTTGAATGCTAGGTATTTAGATCATAAGTTCACATTTTGAGCATATGAAACTTGGTGCTCTGGTGATCTGCTCTATTTTATATGTTACAAAGGGTTCTACTTTGAGGCTTAGCTGCTGGTTGATATACTTGATGAAACTCTGCATAAAGTCTAGATGGATACTACCTAGCATCATGGCATCTTCTTTCCTGACATTTTGTATTATTATATTGATATTTTCTACATTTTGTTGACAAGCAATTCGCTAAAGCAGTATCAAGTTCTTATAAAGCTGTATGACAAACCTGGTGCTTTCTTTCTGCAGTTCCATTGAGGCTTTGTCCATTATTTCCTTAATTCATATTGCACTTGTATTCTGCACCATTTGTAATGTGTGTGATGTGGTTCCTGACGTTTTATGCAAACAGGAGCTAGAGTCCAGTCTTGCATCCAAACAAGCATCATTGCCGTCAGAGCCAGCTGCAGACGAGGAAGGTGCTGTCACACTTGTAGTCCGCATGCCTGATGGTAGTCGACAGGGGCGTCGCTTTCTGAAATCTCATAAACTTCAGGTAGGCTTACTTTCTGTCCTTCTGTTTTATGTGGATAACCACTAATACATGCTTTCCTCTTGCAGTTCCTTTTTGATTTCTTAGACATTGGCAGGACTTATAAGCCAGGAACCTACAGACTGGTAATTCGCTACTGTTAGTTCTTTTTTGAAGGTCACCCCCTTTATTTGACGACATATATTTTATCTGTACTCCCAGAAGAGTGAATCATATTGATACAAATGAGTGCAATCTAGTTGTGGATGTGAGAACGATGAGTCCATAGTTTAGCTTCTAAAGGATAGGGAGATTCATTTCAGGGTACATTAAAGTGTTTCTTTGCTGCTCCTTTGCTGACTTTTCTGGTGATATACTCTAGTAGTATGTGCGACTTCTGATCTTGTTAGCTGAAGGGCTTCTGCTAAATCAAAGTTTTTAAAACTAATAGGCTACTGATCTTGTTAGCTGAAGGGCTTCTGCTAAATCAAAGTTTTTAAAACTAATAGGCTACTGCCATGCTTGGAAAACCATTTCCACAGTGTAGCTGCTACCATTTGATTTGAGTGGGCATTTCCTTTTTCACTCTTGTTAAAATTGTGGAACTGTTAGAAATTGTGTAGTCTGAGACAATTGTGGAACTCATACATGTACCATTCTGTGACATGCAGGTAAGGTCGTACCCAAGGCGTGCTTTCACCACTGGTGAGGGCGATATGTCATTTAGTGATCTGGGCCTAACAAGCAAGCAGGAAGCCTTATTTCTAGAAAAGATTACAGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029408