BGIOSGA029423

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Revision as of 09:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029423| Description = BGIOSGA029423| Definition = Oryza sativa Indica Group BGIOSGA029423, complete gene.| tag = | tid = BGIOSGA029423-TA|...")
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Gene Name

BGIOSGA029423

Description

BGIOSGA029423

Definition

Oryza sativa Indica Group BGIOSGA029423, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA029423-TA

Ensembl Protein ID

BGIOSGA029423-PA

Length

1170

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19109345..19110514

Sequence Coding Region

19110215..19110514,19109892..19110117,19109345..19109802

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19109345..19110514 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19109345..19110514 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGAAAGTTGTCTTCCATAAGTTGTGTGCTGAGCTTAGATCACGTGCCCTGCTAGAGGAGACTTTTCATGTCACAATAGAGGAACAAGTCGCTATGTTTATTCACGTTGTGGGTCACAATTGGTCAAATAGACCAATTGCATTTGAATTCATGAGATCGGGTGAGACTGTTAGTAGGTATTTCAATCTTGTTTTAGATGCCCTCTATATCCTTGCCCGTGACCTTGTATGCATCAAATCCATTGACACACATCAAAAGATAACAAGCTCTCATGGCAGATTTCACCCCTACTTTCAGGGATGCATAGGAGCCCTGGATGGTACACATATTCCAGCATGTGTACCTATGCATATGCAAGACCGGTTTAGGGGTAGAAAGAAATTTCCATCACAAAATGTGCTAGCAGCAGTTGATTTTGACTTAAGGTTCTTATATGTTCTTGCTGGATGGGAAGGTTCTGCCCATGATTCTTATGTGCTTCAAGATGCTCTATCACGTACTAATGGCCTTAAAATACCAGAAGGTAAATATTTCCTAGCTGATGCCGGATATGCAGCTAGACCTGGTGTATTACCCCCATACCGAGGTACCCGATATCACCTAAAAGAATATAAGGGCGCTAGAGAACCAGAGAACCCAAAGGAGTTATTCAACCTTCGGCATTCCTCTCTTAGAACAACTATTGAGCGAGCATTTGGTGCCTTGAAGAACCGCTTCAGAATATTTAAATGCCAACCATTTTTTCCTTCGAAAACACAAGTGAAAATTGTGATGGCTTGTTGTGCACTTCATAACTGGATTATAGAGGACGGTCCTGATGTCTATGTGTATGACGATGCTGCTTGGTATGCAGCGCTGCCACGGAGTGTAAGAAACCGTACTGATATGCACCAGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTACACCTGATCAAGGGTTCTTGTTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MRKVVFHKLCAELRSRALLEETFHVTIEEQVAMFIHVVGHNWSNRPIAFEFMRSGETVSRYFNLVLDALYILARDLVCIKSIDTHQKITSSHGRFHPYFQGCIGALDGTHIPACVPMHMQDRFRGRKKFPSQNVLAAVDFDLRFLYVLAGWEGSAHDSYVLQDALSRTNGLKIPEGKYFLADAGYAARPGVLPPYRGTRYHLKEYKGAREPENPKELFNLRHSSLRTTIERAFGALKNRFRIFKCQPFFPSKTQVKIVMACCALHNWIIEDGPDVYVYDDAAWYAALPRSVRNRTDMHQEXXXXXXXXXXXXXXXXXQLHLIKGSCW</aaseq>

Gene Sequence

<dnaseqindica>1..300#398..623#713..1170#ATGAGGAAAGTTGTCTTCCATAAGTTGTGTGCTGAGCTTAGATCACGTGCCCTGCTAGAGGAGACTTTTCATGTCACAATAGAGGAACAAGTCGCTATGTTTATTCACGTTGTGGGTCACAATTGGTCAAATAGACCAATTGCATTTGAATTCATGAGATCGGGTGAGACTGTTAGTAGGTATTTCAATCTTGTTTTAGATGCCCTCTATATCCTTGCCCGTGACCTTGTATGCATCAAATCCATTGACACACATCAAAAGATAACAAGCTCTCATGGCAGATTTCACCCCTACTTTCAGGTACATCAAAATTGATAATCCCTGTTTAAGTATACCCTAAGAGTTTAGGGCCATATTCACCTATATTTGTTCTAAAAAAAATTGTCTATTTTCGTAGGGATGCATAGGAGCCCTGGATGGTACACATATTCCAGCATGTGTACCTATGCATATGCAAGACCGGTTTAGGGGTAGAAAGAAATTTCCATCACAAAATGTGCTAGCAGCAGTTGATTTTGACTTAAGGTTCTTATATGTTCTTGCTGGATGGGAAGGTTCTGCCCATGATTCTTATGTGCTTCAAGATGCTCTATCACGTACTAATGGCCTTAAAATACCAGAAGGTAGGATTATTCACATCATATCCTAATAGCTCCATATCTTAAACTTCAATTCTGTTCTTAGCTAATTAATATGCACAAAAAATATGTAGGTAAATATTTCCTAGCTGATGCCGGATATGCAGCTAGACCTGGTGTATTACCCCCATACCGAGGTACCCGATATCACCTAAAAGAATATAAGGGCGCTAGAGAACCAGAGAACCCAAAGGAGTTATTCAACCTTCGGCATTCCTCTCTTAGAACAACTATTGAGCGAGCATTTGGTGCCTTGAAGAACCGCTTCAGAATATTTAAATGCCAACCATTTTTTCCTTCGAAAACACAAGTGAAAATTGTGATGGCTTGTTGTGCACTTCATAACTGGATTATAGAGGACGGTCCTGATGTCTATGTGTATGACGATGCTGCTTGGTATGCAGCGCTGCCACGGAGTGTAAGAAACCGTACTGATATGCACCAGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTACACCTGATCAAGGGTTCTTGTTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029423