Os10g0536000

From RiceWiki
Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0536000| Description = Similar to SUMO E2 conjugating enzyme SCE1| Version = NM_001071702.1 GI:115483147 GeneID:4349236| Length = 3266 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0536000

Description

Similar to SUMO E2 conjugating enzyme SCE1

Version

NM_001071702.1 GI:115483147 GeneID:4349236

Length

3266 bp

Definition

Oryza sativa Japonica Group Os10g0536000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21303335..21306600

Sequence Coding Region

21303582..21303644,21303731..21303844,21303920..21304072,21306245..21306328,21306422..21306490

Expression

GEO Profiles:Os10g0536000

Genome Context

<gbrowseImage1> name=NC_008403:21303335..21306600 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21303335..21306600 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgggagggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcacgggttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcactgcaccatccccggcaagcaggggaccgattgggaaggtgggtactaccctcttacccttcacttcagtgaggactatcctagcaaaccacccaagtgcaagttcccacagggctttttccacccaaatgtctatccttcaggaacagtgtgcctctcaattcttaatgaggatagtggctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgatcagccaaatcctgctgatcctgcacagactgacggttatcacatttttatacaggacaaaccagaatataagaggcgtgttcgtgttcaggccaagcagtaccctgctttgctttga</cdnaseq>

Protein Sequence

<aaseq>MSGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHC TIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDS GWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEYKRRVRVQAKQYPALL </aaseq>

Gene Sequence

<dnaseqindica>2957..3019#2757..2870#2529..2681#273..356#111..179#ggaaataataatacaagagaccgaacgactagagattagagaaggcggtgcttcttcttcttttccagagactaccaagcccaaaccagcaaccacccgccgccgccgccatgtcgggagggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcacgtcggtgattttttttctatttttttcgcatcttctatggccgccgattgtgtttcttctgacctggtgctttgcttgcttgctctggatcaggggttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcactgcaccatccccggcaagcagggggtaagtaaccaaactgctctagccgaggcgccgacggcgaaccatcccacccctcttcctgtttcgatctgtttcgattatgctgctgcggatgctggtgtgtgctcggattgtgatgcgaccacgcaatcggatgcttcctctgtgtgggggagaatttaggtttttgccgcgctgttctgttggtaggtttgggaggggggggggggtagatttgtagattggattggtatctgcactggaatctctataacctgtgggagaattatgagtagttatgttggttggagggtttgaatgaagtttttattgatggatcgtgttgatttgcagtggggatttgctagggtcttacagatcttagtatgatttttttttttagaattttagtgttatcatcaattgatctagtagtaccttttatttctggacagctgggaggagttttctctgttgtttgagtgttaattacgtgattttgtagcatgagttgccttcaaacgttctaggttcagcgtatcaaatagttcttttccatcactagaggtttgcacagttgcctgcgtgctttgctttaccacctgtaaaccaggcatggagcacacggactcatgaatcccgatgcaattgcacggagtcacgggcacagttattgaattaacagggtacaaggatctgaatgttgtaagatttagttgctgaaagatggattatagtcaccatcactactgtcttcataatcaacatcacttccaaaacactttatcttgcatatggggggatatatagtaatcttcagtggcggacccaggatttcttcatgccctaggccaaatctaattgctactatcccataccataaatgagacccacactaatacataataagaagtacaatacaaattattatagtttcgaaaggaaaaaaacaacaacgcaagaaacagcatctaacctcaaaatgacagctatttgctctttgaaagatgcatctccatcatactcatcaacaaaaatggcggattttttttccaccgaaagcatttagaatggttttacccgtctcaattgcacaagatttacactgtagattttgtatttttagtgaagtgaatagatgattcccgggagaattttgaaatgtttctggtcattagatgattcccgggagaattttgaaatgtttctggtcatctttattcttctctttataccccatcaatcatctatagatttcatcgctaagcctcttcaccttctatctctattaagtttaaaacaaattgaatggaatcagaagatctataggtgatctaggccatttaggcatttgagaaatgggaataccagaaatagattatgaaaaactcacctgtcaaggtcctcgtccgctccttgcccgacagagtggaggtctgagactctgagcacctgccgcttgccgcaggcgcaccgtgcaggggggttgtgcagaaagagccttgttgccgggccgccgagccagcgagaggagctgaggaggcagtggacatggacggagggagggaagtgaggtggctgggcagggtggtgggtggctggaagcggggagactcacgtatggtggcggctggccttggagggagcgagcagggagggaggcgaggggacggacgcatcggcgtcggcgcatctcccacgagcgcatagcgttgtagtggtagcagggggaagttagggttagacaataaatagtattgggcaatagatgctagcctgacgggcctcgggccaaacctttgtgagccaaaatttctaagctgtaaccaatggggggatccattgctagttgggccaggccccaggttgtggcctaaggtgcccgggcctgggtgcgcccctggtgatcttgtgtattagttcagcatgctgctgctcaacttctattgttatgtaacaatcactctcttgacaaaccagcctagtaggctaacaaatactaattttccttcaataaatgtattattgtcatatacttattgcttctttatgttgatatatgtatattacagtgtatttttcactctgcccatggaacgccaattaggggttgcttttaagcttttcctgtttctttccatccagagttcataattgcttatgttatttgtgtgtattgctacatttgtacagaccgattgggaaggtgggtactaccctcttacccttcacttcagtgaggactatcctagcaaaccacccaagtgcaagttcccacagggctttttccacccaaatgtctatccttcaggaacagtgtgcctctcaattcttaatgaggatagtgtaagtcttcaagctgtttcttcagtcttatttatttccagtctaccgaatttatttacagttgcatcttctcagggctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgatcagccaaatcctgctgatcctgcacagactgacggttatcacatttttatacaggtcggaatgaaaaaaaaatgagattctggcattccttgttcttacattacatgtcattcattgacattattttgtctactttgcaggacaaaccagaatataagaggcgtgttcgtgttcaggccaagcagtaccctgctttgctttgaggacattggcctaataaagttactacccgattcatcatgcacatccgcatagtagtttgcaaaatctcagattattgcaccagaaaatatcggattttatgggatataacctaaaatggaatgtttgaagaactgtccaatatcattgtggactttttgtgctgtcattaccatttgtgctgtgtgaagaacagaaatagctttgtcaactgttgaaaccgcttgagtgatggatgctaatttggat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0536000, RefSeq:Os10g0536000